BLASTX nr result
ID: Lithospermum22_contig00004435
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00004435
(2102 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula] ... 467 e-129
ref|XP_003588326.1| ATP synthase subunit alpha [Medicago truncat... 249 7e-85
ref|YP_588403.1| hypothetical protein ZeamMp158 [Zea mays subsp.... 153 2e-39
ref|YP_005415536.1| hypothetical protein RSPPHO_03226, partial [... 132 2e-30
ref|YP_005415556.1| hypothetical protein RSPPHO_03247, partial [... 132 2e-30
>ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula]
gi|355477385|gb|AES58588.1| Ribosomal protein S10
[Medicago truncatula]
Length = 1152
Score = 467 bits (1202), Expect = e-129
Identities = 253/353 (71%), Positives = 257/353 (72%)
Frame = -2
Query: 1366 GTPKAKAALWVPTDAGVRKHGERTGLDTLVVHAVNDECSPLVYVDQGPS*RVKHSAWGVR 1187
GTPKAKAALWVPTDAGVRKH ERTGLDTLVVHAVNDECSPLVYVDQGP+
Sbjct: 240 GTPKAKAALWVPTDAGVRKHRERTGLDTLVVHAVNDECSPLVYVDQGPN----------- 288
Query: 1186 SQDRNSKELTGACTSGGACGLIRYNAQNLTSP*HMNKKTCP*RDGTDFHTGVAWLSSARV 1007
RNSKELTGACTSGGACGLIRYNAQNLTS AWLSSARV
Sbjct: 289 ---RNSKELTGACTSGGACGLIRYNAQNLTS--------------------AAWLSSARV 325
Query: 1006 VRCLVKSYNERNPRFVLLRHAPKEKVFATEVSRGAE*RASATN*VPARSCAVSKKVAGAF 827
VRCLVKSYNERNPRFVLLRHAPKEKVFATEVSRG SKK
Sbjct: 326 VRCLVKSYNERNPRFVLLRHAPKEKVFATEVSRGL----------------ASKKTDART 369
Query: 826 RSTF*LALFFDCS*RA*LIRRLGIQASRPVVWYVVGLVRPAKTAPKQTKRCVPHSRRTAS 647
RS+ C L A P +TAPKQTKRC+PHSR TAS
Sbjct: 370 RSSI------PCDDDVELAAEKDSYAP------------PKQTAPKQTKRCMPHSRGTAS 411
Query: 646 DILEEGGDDVKSAWPLWAGPHTCYNGNYNGKQGCKAERIRKDCLSSDCSLQLGNMKLESL 467
DILEEGGDDVKSAWPLWAGPHTCYNGNYNGKQGCKAERIRKDCLSSDCSLQLGNMKLESL
Sbjct: 412 DILEEGGDDVKSAWPLWAGPHTCYNGNYNGKQGCKAERIRKDCLSSDCSLQLGNMKLESL 471
Query: 466 VIADQHAAVNMYPGPVHTARHTLGIGFARSIEPMITHDFCVTLVPQRLLVVLL 308
VIADQHAAVNMYPGPVHTARHTLGIGFARSI PMITHDFCV LVPQRLLVVLL
Sbjct: 472 VIADQHAAVNMYPGPVHTARHTLGIGFARSIRPMITHDFCVPLVPQRLLVVLL 524
Score = 127 bits (318), Expect(3) = 2e-64
Identities = 73/107 (68%), Positives = 76/107 (71%)
Frame = -2
Query: 1957 LKVACLAQEVRRVENKVANG*VTRGNLPNSSGQILKKAKKRCLMSLRSIS*LVRQ*LTKA 1778
+KVACLAQEV VENKVANG V RGNLPNSSGQILKKAKK LTK
Sbjct: 117 VKVACLAQEVGTVENKVANGCVMRGNLPNSSGQILKKAKK----------------LTKP 160
Query: 1777 MISSWSERMISHTGTETRPRLLREAAVGNLGQWAKA*SSNIA*VKKG 1637
M+ SWS RMISHTGTETRP L R AAVGNLGQWAKA SSNI + G
Sbjct: 161 MMLSWSFRMISHTGTETRPGLPRGAAVGNLGQWAKARSSNICAIMTG 207
Score = 101 bits (252), Expect(3) = 2e-64
Identities = 47/48 (97%), Positives = 47/48 (97%)
Frame = -3
Query: 2100 TRFYHCRAQSYSKEEFDPGSEGTLAICLTHASRTLFSGSWAEGIEAPS 1957
TRFYHCRAQSYSKEEFDPGSEGTLAICLTHASRTLFSGSWAEG EAPS
Sbjct: 69 TRFYHCRAQSYSKEEFDPGSEGTLAICLTHASRTLFSGSWAEGKEAPS 116
Score = 67.0 bits (162), Expect(3) = 2e-64
Identities = 32/34 (94%), Positives = 32/34 (94%)
Frame = -1
Query: 1607 CTIMTRLEEEAPANSVPAAAVRRGGQVFFGMTGR 1506
C IMT LEEEAPANSVPAAAVRRGGQVFFGMTGR
Sbjct: 202 CAIMTGLEEEAPANSVPAAAVRRGGQVFFGMTGR 235
>ref|XP_003588326.1| ATP synthase subunit alpha [Medicago truncatula]
gi|355477374|gb|AES58577.1| ATP synthase subunit alpha
[Medicago truncatula]
Length = 1116
Score = 249 bits (636), Expect(2) = 7e-85
Identities = 122/136 (89%), Positives = 125/136 (91%)
Frame = +3
Query: 1545 YRGCWHGVSRGFFLESCHDRALDERALQAALPFFTHAILLDQAFAHCPRFPTAASRRSLG 1724
YRGCWHGVSRGFFLESCHDRALDERALQAALPFFTHAILLD+AFAHCPRFPTAA R S G
Sbjct: 935 YRGCWHGVSRGFFLESCHDRALDERALQAALPFFTHAILLDRAFAHCPRFPTAAPRGSPG 994
Query: 1725 RVSVPVWLIILSDQLLIIALVSYCLTN*LILRRLIKQRFLAFFRIWPELFGRFPRVTHPF 1904
RVSVPVWLII DQL II LVS LTN LILRRLIKQRFLAFFRIWPELFGRFPR+THPF
Sbjct: 995 RVSVPVWLIIRKDQLSIIGLVSLYLTNYLILRRLIKQRFLAFFRIWPELFGRFPRITHPF 1054
Query: 1905 ATLFSTLLTSWARQAT 1952
ATLFST+ TSWARQAT
Sbjct: 1055 ATLFSTVPTSWARQAT 1070
Score = 93.6 bits (231), Expect(2) = 7e-85
Identities = 43/44 (97%), Positives = 43/44 (97%)
Frame = +2
Query: 1958 LGASIPSAQLPENNVRLACVKHIASVPSEPGSNSSFEYDWALQW 2089
LGAS PSAQLPENNVRLACVKHIASVPSEPGSNSSFEYDWALQW
Sbjct: 1073 LGASFPSAQLPENNVRLACVKHIASVPSEPGSNSSFEYDWALQW 1116
Score = 166 bits (420), Expect(3) = 6e-76
Identities = 82/97 (84%), Positives = 83/97 (85%)
Frame = +3
Query: 1068 QVFLFICQGLVRFCALYRIKPHAPPLVQAPVNSFEFRSCDRTPQAECFTR*LGP*ST*TK 1247
QVFLFICQGLVRFCALYRIKPHAPPLVQAPVNSFEFRSCDRTP+ TK
Sbjct: 845 QVFLFICQGLVRFCALYRIKPHAPPLVQAPVNSFEFRSCDRTPE--------------TK 890
Query: 1248 GEHSSFTAWTTRVSNPVRSPCFRTPASVGTQRAAFAF 1358
GEHSSFTAWTTRVSNPVRSPCFRTPASVGTQRAAFAF
Sbjct: 891 GEHSSFTAWTTRVSNPVRSPCFRTPASVGTQRAAFAF 927
Score = 107 bits (266), Expect(3) = 6e-76
Identities = 56/75 (74%), Positives = 58/75 (77%), Gaps = 2/75 (2%)
Frame = +2
Query: 794 IKKER*LESAS--KGAGYLLTDSTATCWHXXXXXXXXXXXXXHFGCKDFLLRRMSQQHKT 967
IKK+R LESAS KGAG LLTDSTATCWH HFGCKDFLLRRMSQQHKT
Sbjct: 769 IKKQRTLESASNSKGAGSLLTDSTATCWHSISSAGASLGSSAHFGCKDFLLRRMSQQHKT 828
Query: 968 RVSLVIGLNQTSHDT 1012
RVSLVIGL+QTSHDT
Sbjct: 829 RVSLVIGLDQTSHDT 843
Score = 61.2 bits (147), Expect(3) = 6e-76
Identities = 27/30 (90%), Positives = 27/30 (90%)
Frame = +1
Query: 682 LFVSEQFWRGVLNPLRTTPPGGSPECRVFL 771
LF S FWRGVLNPLRTTPPGGSPECRVFL
Sbjct: 705 LFRSRLFWRGVLNPLRTTPPGGSPECRVFL 734
>ref|YP_588403.1| hypothetical protein ZeamMp158 [Zea mays subsp. mays]
gi|40795104|gb|AAR91148.1| hypothetical protein
(mitochondrion) [Zea mays]
Length = 111
Score = 153 bits (386), Expect(2) = 2e-39
Identities = 72/84 (85%), Positives = 75/84 (89%), Gaps = 3/84 (3%)
Frame = -2
Query: 721 GLVRPAKT---APKQTKRCVPHSRRTASDILEEGGDDVKSAWPLWAGPHTCYNGNYNGKQ 551
G+VR + APKQ KRCVPHSR TAS+ILEEGGDDVKSAWPLWAGPHTCYNGN NGKQ
Sbjct: 28 GVVRSGNSTRPAPKQRKRCVPHSRGTASEILEEGGDDVKSAWPLWAGPHTCYNGNDNGKQ 87
Query: 550 GCKAERIRKDCLSSDCSLQLGNMK 479
GCKAERIRKDCLSSDCSLQLGNMK
Sbjct: 88 GCKAERIRKDCLSSDCSLQLGNMK 111
Score = 38.5 bits (88), Expect(2) = 2e-39
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = -1
Query: 770 KKTRHSGEPPGGVVRSGFST 711
+KTRH G+PPGGVVRSG ST
Sbjct: 17 RKTRHEGQPPGGVVRSGNST 36
>ref|YP_005415536.1| hypothetical protein RSPPHO_03226, partial [Rhodospirillum
photometricum DSM 122] gi|378401450|emb|CCG06566.1|
Putative uncharacterized protein, partial
[Rhodospirillum photometricum DSM 122]
Length = 161
Score = 132 bits (333), Expect(2) = 2e-30
Identities = 65/96 (67%), Positives = 71/96 (73%)
Frame = -2
Query: 667 HSRRTASDILEEGGDDVKSAWPLWAGPHTCYNGNYNGKQGCKAERIRKDCLSSDCSLQLG 488
HS TA D EEGGDDVKS+WPL AG HTCYNG YNG + I K CLSSDC+LQLG
Sbjct: 42 HSGETAGDKPEEGGDDVKSSWPLRAGLHTCYNGIYNGSPPRERALISKRCLSSDCTLQLG 101
Query: 487 NMKLESLVIADQHAAVNMYPGPVHTARHTLGIGFAR 380
MK ESLVI DQHA VN +PG VHTARHT+G+G R
Sbjct: 102 CMKSESLVIVDQHATVNTFPGLVHTARHTMGVGSTR 137
Score = 28.1 bits (61), Expect(2) = 2e-30
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -1
Query: 305 AYHGGVFDWGEVVTR 261
A HG V DWGEVVTR
Sbjct: 147 AGHGRVSDWGEVVTR 161
>ref|YP_005415556.1| hypothetical protein RSPPHO_03247, partial [Rhodospirillum
photometricum DSM 122] gi|378401470|emb|CCG06586.1|
unnamed protein product, partial [Rhodospirillum
photometricum DSM 122]
Length = 137
Score = 132 bits (333), Expect(2) = 2e-30
Identities = 65/96 (67%), Positives = 71/96 (73%)
Frame = -2
Query: 667 HSRRTASDILEEGGDDVKSAWPLWAGPHTCYNGNYNGKQGCKAERIRKDCLSSDCSLQLG 488
HS TA D EEGGDDVKS+WPL AG HTCYNG YNG + I K CLSSDC+LQLG
Sbjct: 18 HSGETAGDKPEEGGDDVKSSWPLRAGLHTCYNGIYNGSPPRERALISKRCLSSDCTLQLG 77
Query: 487 NMKLESLVIADQHAAVNMYPGPVHTARHTLGIGFAR 380
MK ESLVI DQHA VN +PG VHTARHT+G+G R
Sbjct: 78 CMKSESLVIVDQHATVNTFPGLVHTARHTMGVGSTR 113
Score = 28.1 bits (61), Expect(2) = 2e-30
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -1
Query: 305 AYHGGVFDWGEVVTR 261
A HG V DWGEVVTR
Sbjct: 123 AGHGRVSDWGEVVTR 137