BLASTX nr result

ID: Lithospermum22_contig00004418 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00004418
         (1970 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277528.2| PREDICTED: uncharacterized protein LOC100253...   162   2e-37
ref|XP_002525522.1| nucleic acid binding protein, putative [Rici...   160   2e-36
ref|XP_004141539.1| PREDICTED: uncharacterized protein LOC101203...   149   3e-33
ref|XP_002325510.1| predicted protein [Populus trichocarpa] gi|2...   140   1e-30
ref|XP_003610912.1| Far upstream element-binding protein [Medica...   139   3e-30

>ref|XP_002277528.2| PREDICTED: uncharacterized protein LOC100253453 [Vitis vinifera]
          Length = 772

 Score =  162 bits (411), Expect = 2e-37
 Identities = 118/329 (35%), Positives = 137/329 (41%), Gaps = 66/329 (20%)
 Frame = -1

Query: 1337 VRPSPLSGGHGQPALRPRGSLAP-QWGPQTALPSHFTGYDHHHRGGYPSQSQQY-PPTYG 1164
            VR S   G + Q   RPRG   P QWGP+   P   TGYD+  RG YPSQ+QQY PP+YG
Sbjct: 347  VRSSTYPGSYNQQGYRPRGPTGPSQWGPRGPHPGQPTGYDYQ-RGAYPSQNQQYAPPSYG 405

Query: 1163 NYP--QSAPRGSYGPSWEQRPPVQ------------------------------------ 1098
             YP  Q APR S+G  WEQRPP                                      
Sbjct: 406  GYPPQQMAPRSSFGSGWEQRPPANMQGPPQSGGYDFYGGQGGHGPDAPAAAPHSASMSIH 465

Query: 1097 ----------GLPP-QGSYNYGQSQGSEXXXXXXXXXXXXXXYNEGYS---------GPQ 978
                      G PP QG+YNYGQ QG +                 G+           P 
Sbjct: 466  APGPSPSPGMGPPPSQGNYNYGQPQGPDYGQQAQYSQTGPPQQGYGHGYDEPKYEGQAPT 525

Query: 977  QHPYGAYGGSQSTSXXXXXXXXXXXXXXXXXXPSSYGVP---PQAQAYGQPRA---GEAP 816
              PYG +G                        P SYG+    P AQ+YG PRA   G+ P
Sbjct: 526  HPPYGGHGSQPV--YPQGGAQSGYPPQQPYGKPQSYGMASQAPAAQSYGPPRASQPGDVP 583

Query: 815  YQGSVPPTQSYGSSVPPQQSYPYGSGVPVQQSYPMYNAVAPADGXXXXXXXXXXXXXXXX 636
            YQG +   QSYG +VPPQQ YPY S  P+QQSYP Y +   ADG                
Sbjct: 584  YQGPMSSNQSYGPNVPPQQ-YPYASSGPMQQSYPAYGSQPAADGYNQPQPASGPGYPQQG 642

Query: 635  XAVPPATGYAQPGGQQPAVYGQGGAVSGY 549
                P +GY+QPGGQQ   Y Q G   GY
Sbjct: 643  GQ--PMSGYSQPGGQQAPGYAQVGPQGGY 669


>ref|XP_002525522.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223535201|gb|EEF36880.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 798

 Score =  160 bits (404), Expect = 2e-36
 Identities = 116/330 (35%), Positives = 140/330 (42%), Gaps = 65/330 (19%)
 Frame = -1

Query: 1337 VRPSPLSGGHGQP-ALRPRGSLAPQ-WGPQTALPSHFTGYDHHHRGGYPSQSQQYPP-TY 1167
            VR SPLSGG+ Q  + RPRG   P  WGP+    S  + YD+HHRG YPSQ+ QYPP +Y
Sbjct: 371  VRLSPLSGGYNQQQSYRPRGPTGPSHWGPRGPHSSQPSPYDYHHRGPYPSQNSQYPPPSY 430

Query: 1166 GNYPQS--APRGSYGPSWEQRPP-VQGL-------------------------------- 1092
            G YP     PRG++G  WEQRPP +QG                                 
Sbjct: 431  GGYPPQHMGPRGNFGSGWEQRPPNMQGPVSHGGGYDYYGGQGGHVPDHPSSAPISNPITG 490

Query: 1091 --------------PPQGSYNYGQSQGSEXXXXXXXXXXXXXXY-NEGYSGPQ------- 978
                          P Q +YNYGQ  G +                  GY  P+       
Sbjct: 491  HATGPSPTPGMGHPPSQANYNYGQQHGPDYGHQAPYSQAVSQHGYGHGYDEPKYDSHAQT 550

Query: 977  QHPYGAYGGSQSTSXXXXXXXXXXXXXXXXXXPSSYGVPPQA--QAYGQPRAGEA---PY 813
            QHPYG   G+                        SYG+ PQ   Q+YG PR G+    PY
Sbjct: 551  QHPYGH--GNPQPVYPQASNQPGYGAQQQYGKQPSYGMLPQGPPQSYGPPRPGQPGDMPY 608

Query: 812  QGSVPPTQSYGSSVPPQQSYPYGSGVPVQQSYPMYNAVAPADGXXXXXXXXXXXXXXXXX 633
            Q   P +QSYGS+VPPQQ YPY S  P+QQ+YP Y A +  DG                 
Sbjct: 609  QAPNPSSQSYGSNVPPQQQYPYASSGPMQQAYPSYGAPSATDGYNQGLPASVPGYPQQAG 668

Query: 632  AVPPATGYAQPGGQQPAVYGQGGAVSGYSS 543
                   Y QPGGQQ + Y QG +  GY S
Sbjct: 669  --QSVASYGQPGGQQASAYVQGPS-GGYGS 695


>ref|XP_004141539.1| PREDICTED: uncharacterized protein LOC101203078 [Cucumis sativus]
            gi|449481514|ref|XP_004156205.1| PREDICTED:
            uncharacterized LOC101203078 [Cucumis sativus]
          Length = 787

 Score =  149 bits (376), Expect = 3e-33
 Identities = 115/318 (36%), Positives = 129/318 (40%), Gaps = 62/318 (19%)
 Frame = -1

Query: 1337 VRPSPLSGGHGQPALRPRGSLAP-QWGPQTALPSHFTGYDHHHRGGYPSQSQQYP-PTYG 1164
            VRPSP S G  Q A RPRG   P QWG +   PSH  GYD+ HRG YPS + QY  P YG
Sbjct: 358  VRPSPHSTGFNQQAYRPRGPGGPTQWGHRGPHPSHPAGYDYPHRGPYPSHNTQYQHPGYG 417

Query: 1163 NYPQS--APRGSYGPSWEQRPP--VQGLPP------------------------------ 1086
            NYPQ    PR SYG  WEQRPP  +QG PP                              
Sbjct: 418  NYPQQMGGPRSSYGSGWEQRPPPSMQGPPPSSGGYDYYGQRSHYSDAPPSHFPGAMPSHA 477

Query: 1085 --------------QGSYNYGQSQGSEXXXXXXXXXXXXXXY-NEGYS------GPQQHP 969
                          Q SYNY Q QG                    GY        P Q+P
Sbjct: 478  PGPSPAPTHGPPQTQSSYNYNQQQGQGYGHTAPYSQAAPHQSYGHGYEQKYDHHAPAQNP 537

Query: 968  YGAYGGSQSTSXXXXXXXXXXXXXXXXXXPSSYGVP---PQAQAYGQPRAGEA--PYQGS 804
            Y  +G +Q                     PSSYGV    P  Q+YG PR G+   PYQG 
Sbjct: 538  YSGHGNAQH--YPQAGTQQVYPGQQYDNKPSSYGVSQQGPPPQSYGAPRVGQPAEPYQGG 595

Query: 803  VPPTQSYGSSVPPQQSYPYGSGVPVQQSYPMYNAVAPADGXXXXXXXXXXXXXXXXXAVP 624
              P  +YG ++ PQQ+YPY SG   QQ YP Y A    DG                    
Sbjct: 596  SAPA-TYGQNMQPQQTYPYQSGGSTQQ-YPPYGAAPSTDGYNQAPAASAAAGYSQQG--- 650

Query: 623  PATGYAQPGGQQPAVYGQ 570
               GY QP  QQP+ YGQ
Sbjct: 651  AQAGYGQPSVQQPSAYGQ 668


>ref|XP_002325510.1| predicted protein [Populus trichocarpa] gi|222862385|gb|EEE99891.1|
            predicted protein [Populus trichocarpa]
          Length = 581

 Score =  140 bits (354), Expect = 1e-30
 Identities = 110/324 (33%), Positives = 134/324 (41%), Gaps = 59/324 (18%)
 Frame = -1

Query: 1337 VRPSPLSGGHGQP-ALRPRGSLAP-QWGPQTALPSHFTGYDHHHRGGYPSQSQQYPPTYG 1164
            VRPS LS    Q  + RPRG   P  WGP+    +    YD+ HRG YPS   QYPP YG
Sbjct: 166  VRPSTLSSSFNQQQSYRPRGPTGPAHWGPRGPHSNQKMPYDYQHRGPYPSHGSQYPPAYG 225

Query: 1163 NYPQS-APRGSYGPSWEQRP---------------------------------------- 1107
            +YPQ  APR +Y   WEQRP                                        
Sbjct: 226  DYPQHMAPRSNYSSGWEQRPANVQGPHTHTSGYDYYSQGGHASDHPVSGPMPTPIPGPAS 285

Query: 1106 -----PVQGLPP-QGSYNYGQSQGSEXXXXXXXXXXXXXXYN--EGYSGPQQHPYGAYGG 951
                 PV G PP Q +Y+YGQS G +               +   GY  P+ +PYG YG 
Sbjct: 286  RHSPAPVMGGPPSQVNYSYGQSHGPDYGHQAPYSQAAPSHQSYGHGYDEPK-YPYG-YGS 343

Query: 950  SQSTSXXXXXXXXXXXXXXXXXXPSSYGVP---PQAQAYGQPRAGEA---PYQGSVPPTQ 789
            SQ  +                    S+G+P   P  Q+YG PR G+     YQG +  +Q
Sbjct: 344  SQP-AYSQAGNQPGYGAQQQYGKQPSFGMPSQGPPPQSYGPPRPGQPGDMSYQGPMQSSQ 402

Query: 788  SYGSSVPP--QQSYPYGSGVPVQQSYPMYNAVAPADGXXXXXXXXXXXXXXXXXAVPPAT 615
             YG + PP  QQ YPY S  P+QQ YP Y + + +DG                    P  
Sbjct: 403  LYGPNAPPPLQQQYPYASSGPMQQPYPSYGSGSGSDGYNQAQTASGPGYPQQGGQPVPTP 462

Query: 614  GYAQPGGQQPAVYGQGGAVSGYSS 543
            G  QPGGQ  A Y QG A  GY S
Sbjct: 463  G--QPGGQAAAGYAQGPA-GGYGS 483


>ref|XP_003610912.1| Far upstream element-binding protein [Medicago truncatula]
            gi|355512247|gb|AES93870.1| Far upstream element-binding
            protein [Medicago truncatula]
          Length = 807

 Score =  139 bits (350), Expect = 3e-30
 Identities = 116/321 (36%), Positives = 129/321 (40%), Gaps = 68/321 (21%)
 Frame = -1

Query: 1319 SGGHGQPALRP-RGSLAP-QWGPQTALPSHFTGYDHHHRGGYPSQSQQY-PPTYGNYPQS 1149
            SGG GQ A RP RGS  P QWG + +       YD+ HRG YPS +Q Y PP YGNYPQ 
Sbjct: 387  SGGFGQQAYRPPRGSGGPPQWGQRGSHYGQPPSYDYQHRGPYPSHNQSYAPPPYGNYPQH 446

Query: 1148 -APRGSYGPSWEQRP-------------------------------------PVQGL--- 1092
             APR SYG  WEQRP                                     P  G    
Sbjct: 447  MAPRSSYGSGWEQRPHQSFQGPPSHNGGYDYYGGQSGHSSEAPSSAQHPSSVPQHGTGPS 506

Query: 1091 --------PPQGSYNYGQSQGSEXXXXXXXXXXXXXXYN--EGYS-------GPQQHPYG 963
                    P Q +YNYGQ QG +                  +GY        GP Q+PYG
Sbjct: 507  PLPSMGPSPAQMNYNYGQPQGQDYGHQTPYQQAGHPQQGYGQGYDESKYENRGPAQYPYG 566

Query: 962  AYGGSQSTSXXXXXXXXXXXXXXXXXXPSSYGVPPQA----QAYGQPRA---GEAPYQGS 804
             +   Q T                   P  YGVPP      Q+YG PRA   GE PYQGS
Sbjct: 567  GHSNPQPT-YPQASAQANYAPPQQYGKPPLYGVPPSQGQHPQSYGHPRATQPGEIPYQGS 625

Query: 803  VPPTQSYGSSVPPQQSYPYGSGVPVQQSYPMYNAVAPADGXXXXXXXXXXXXXXXXXAVP 624
             P  QSYG+    QQ YPY S  P Q +YP Y +   ADG                    
Sbjct: 626  TP-AQSYGTV---QQPYPYASSGPSQAAYPTYGSAPAADGYSHPQS-------------A 668

Query: 623  PATGYAQPGGQQPAVYGQGGA 561
            P   YAQPGGQ    YGQ GA
Sbjct: 669  PGQVYAQPGGQPS--YGQPGA 687


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