BLASTX nr result

ID: Lithospermum22_contig00004416 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00004416
         (1327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003610228.1| RING finger-like protein [Medicago truncatul...    81   7e-13
dbj|BAH56864.1| AT2G18670 [Arabidopsis thaliana]                       80   9e-13
gb|AAM67030.1| putative RING zinc finger protein [Arabidopsis th...    80   9e-13
ref|NP_179457.1| RING-H2 finger protein ATL56 [Arabidopsis thali...    80   9e-13
ref|XP_002884149.1| hypothetical protein ARALYDRAFT_900256 [Arab...    79   3e-12

>ref|XP_003610228.1| RING finger-like protein [Medicago truncatula]
           gi|355511283|gb|AES92425.1| RING finger-like protein
           [Medicago truncatula]
          Length = 182

 Score = 80.9 bits (198), Expect = 7e-13
 Identities = 38/81 (46%), Positives = 52/81 (64%), Gaps = 3/81 (3%)
 Frame = -1

Query: 931 CAICLEGFNEGELCRSLPPCGHFFHVSCVDSWLMKVPSCPVCRTRVRLGPQ--ETSLVMS 758
           CA+CL+GF  G+ CR+L  CGH FH  C+D+WL+KV +CP CRT VR  PQ  + S+V  
Sbjct: 102 CAVCLDGFRNGQWCRNLAACGHVFHRRCIDTWLLKVATCPTCRTPVRSNPQTSQGSVVEQ 161

Query: 757 NDDWKI-WWAVSN*EKNGHFL 698
           +++    +W  SN   NG  L
Sbjct: 162 DEEGSSRFWNCSN-NNNGFTL 181


>dbj|BAH56864.1| AT2G18670 [Arabidopsis thaliana]
          Length = 173

 Score = 80.5 bits (197), Expect = 9e-13
 Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 3/58 (5%)
 Frame = -1

Query: 931 CAICLEGFNEGELCRSLPPCGHFFHVSCVDSWLMKVPSCPVCRTRVRL---GPQETSL 767
           C +C +GF +G+ CR+LP CGH FH  CVD+WL+K  +CP+CR RVRL    PQE  L
Sbjct: 102 CVVCFDGFRQGQWCRNLPGCGHVFHRKCVDTWLLKASTCPICRARVRLWEEDPQEGEL 159


>gb|AAM67030.1| putative RING zinc finger protein [Arabidopsis thaliana]
          Length = 181

 Score = 80.5 bits (197), Expect = 9e-13
 Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 3/58 (5%)
 Frame = -1

Query: 931 CAICLEGFNEGELCRSLPPCGHFFHVSCVDSWLMKVPSCPVCRTRVRL---GPQETSL 767
           C +C +GF +G+ CR+LP CGH FH  CVD+WL+K  +CP+CR RVRL    PQE  L
Sbjct: 110 CVVCFDGFRQGQWCRNLPGCGHVFHRKCVDTWLLKASTCPICRARVRLWEEDPQEGEL 167


>ref|NP_179457.1| RING-H2 finger protein ATL56 [Arabidopsis thaliana]
           gi|75339071|sp|Q9ZV51.1|ATL56_ARATH RecName:
           Full=RING-H2 finger protein ATL56
           gi|4185133|gb|AAD08936.1| putative RING zinc finger
           protein [Arabidopsis thaliana]
           gi|15450663|gb|AAK96603.1| At2g18670/MSF3.5 [Arabidopsis
           thaliana] gi|20466087|gb|AAM19965.1| At2g18670/MSF3.5
           [Arabidopsis thaliana] gi|66865918|gb|AAY57593.1| RING
           finger family protein [Arabidopsis thaliana]
           gi|330251697|gb|AEC06791.1| RING-H2 finger protein ATL56
           [Arabidopsis thaliana]
          Length = 181

 Score = 80.5 bits (197), Expect = 9e-13
 Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 3/58 (5%)
 Frame = -1

Query: 931 CAICLEGFNEGELCRSLPPCGHFFHVSCVDSWLMKVPSCPVCRTRVRL---GPQETSL 767
           C +C +GF +G+ CR+LP CGH FH  CVD+WL+K  +CP+CR RVRL    PQE  L
Sbjct: 110 CVVCFDGFRQGQWCRNLPGCGHVFHRKCVDTWLLKASTCPICRARVRLWEEDPQEGEL 167


>ref|XP_002884149.1| hypothetical protein ARALYDRAFT_900256 [Arabidopsis lyrata subsp.
           lyrata] gi|297329989|gb|EFH60408.1| hypothetical protein
           ARALYDRAFT_900256 [Arabidopsis lyrata subsp. lyrata]
          Length = 181

 Score = 78.6 bits (192), Expect = 3e-12
 Identities = 28/52 (53%), Positives = 39/52 (75%)
 Frame = -1

Query: 931 CAICLEGFNEGELCRSLPPCGHFFHVSCVDSWLMKVPSCPVCRTRVRLGPQE 776
           C +C +GF +G+ CR+LP CGH FH  CVD+WL+K  +CP+CR RVRL  ++
Sbjct: 110 CVVCFDGFRQGQWCRNLPGCGHVFHRKCVDTWLLKSSTCPICRARVRLREED 161


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