BLASTX nr result
ID: Lithospermum22_contig00004416
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Lithospermum22_contig00004416 (1327 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003610228.1| RING finger-like protein [Medicago truncatul... 81 7e-13 dbj|BAH56864.1| AT2G18670 [Arabidopsis thaliana] 80 9e-13 gb|AAM67030.1| putative RING zinc finger protein [Arabidopsis th... 80 9e-13 ref|NP_179457.1| RING-H2 finger protein ATL56 [Arabidopsis thali... 80 9e-13 ref|XP_002884149.1| hypothetical protein ARALYDRAFT_900256 [Arab... 79 3e-12 >ref|XP_003610228.1| RING finger-like protein [Medicago truncatula] gi|355511283|gb|AES92425.1| RING finger-like protein [Medicago truncatula] Length = 182 Score = 80.9 bits (198), Expect = 7e-13 Identities = 38/81 (46%), Positives = 52/81 (64%), Gaps = 3/81 (3%) Frame = -1 Query: 931 CAICLEGFNEGELCRSLPPCGHFFHVSCVDSWLMKVPSCPVCRTRVRLGPQ--ETSLVMS 758 CA+CL+GF G+ CR+L CGH FH C+D+WL+KV +CP CRT VR PQ + S+V Sbjct: 102 CAVCLDGFRNGQWCRNLAACGHVFHRRCIDTWLLKVATCPTCRTPVRSNPQTSQGSVVEQ 161 Query: 757 NDDWKI-WWAVSN*EKNGHFL 698 +++ +W SN NG L Sbjct: 162 DEEGSSRFWNCSN-NNNGFTL 181 >dbj|BAH56864.1| AT2G18670 [Arabidopsis thaliana] Length = 173 Score = 80.5 bits (197), Expect = 9e-13 Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 3/58 (5%) Frame = -1 Query: 931 CAICLEGFNEGELCRSLPPCGHFFHVSCVDSWLMKVPSCPVCRTRVRL---GPQETSL 767 C +C +GF +G+ CR+LP CGH FH CVD+WL+K +CP+CR RVRL PQE L Sbjct: 102 CVVCFDGFRQGQWCRNLPGCGHVFHRKCVDTWLLKASTCPICRARVRLWEEDPQEGEL 159 >gb|AAM67030.1| putative RING zinc finger protein [Arabidopsis thaliana] Length = 181 Score = 80.5 bits (197), Expect = 9e-13 Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 3/58 (5%) Frame = -1 Query: 931 CAICLEGFNEGELCRSLPPCGHFFHVSCVDSWLMKVPSCPVCRTRVRL---GPQETSL 767 C +C +GF +G+ CR+LP CGH FH CVD+WL+K +CP+CR RVRL PQE L Sbjct: 110 CVVCFDGFRQGQWCRNLPGCGHVFHRKCVDTWLLKASTCPICRARVRLWEEDPQEGEL 167 >ref|NP_179457.1| RING-H2 finger protein ATL56 [Arabidopsis thaliana] gi|75339071|sp|Q9ZV51.1|ATL56_ARATH RecName: Full=RING-H2 finger protein ATL56 gi|4185133|gb|AAD08936.1| putative RING zinc finger protein [Arabidopsis thaliana] gi|15450663|gb|AAK96603.1| At2g18670/MSF3.5 [Arabidopsis thaliana] gi|20466087|gb|AAM19965.1| At2g18670/MSF3.5 [Arabidopsis thaliana] gi|66865918|gb|AAY57593.1| RING finger family protein [Arabidopsis thaliana] gi|330251697|gb|AEC06791.1| RING-H2 finger protein ATL56 [Arabidopsis thaliana] Length = 181 Score = 80.5 bits (197), Expect = 9e-13 Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 3/58 (5%) Frame = -1 Query: 931 CAICLEGFNEGELCRSLPPCGHFFHVSCVDSWLMKVPSCPVCRTRVRL---GPQETSL 767 C +C +GF +G+ CR+LP CGH FH CVD+WL+K +CP+CR RVRL PQE L Sbjct: 110 CVVCFDGFRQGQWCRNLPGCGHVFHRKCVDTWLLKASTCPICRARVRLWEEDPQEGEL 167 >ref|XP_002884149.1| hypothetical protein ARALYDRAFT_900256 [Arabidopsis lyrata subsp. lyrata] gi|297329989|gb|EFH60408.1| hypothetical protein ARALYDRAFT_900256 [Arabidopsis lyrata subsp. lyrata] Length = 181 Score = 78.6 bits (192), Expect = 3e-12 Identities = 28/52 (53%), Positives = 39/52 (75%) Frame = -1 Query: 931 CAICLEGFNEGELCRSLPPCGHFFHVSCVDSWLMKVPSCPVCRTRVRLGPQE 776 C +C +GF +G+ CR+LP CGH FH CVD+WL+K +CP+CR RVRL ++ Sbjct: 110 CVVCFDGFRQGQWCRNLPGCGHVFHRKCVDTWLLKSSTCPICRARVRLREED 161