BLASTX nr result

ID: Lithospermum22_contig00004408 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00004408
         (828 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300189.1| white-brown-complex ABC transporter family [...    66   8e-09
ref|XP_002525837.1| ATP-binding cassette transporter, putative [...    64   4e-08
emb|CBI34070.3| unnamed protein product [Vitis vinifera]               63   7e-08
ref|XP_002270647.1| PREDICTED: ABC transporter G family member 1...    63   7e-08
gb|AFC36404.1| ABCG1 [Petunia x hybrida]                               62   2e-07

>ref|XP_002300189.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222847447|gb|EEE84994.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 580

 Score = 66.2 bits (160), Expect = 8e-09
 Identities = 42/84 (50%), Positives = 52/84 (61%), Gaps = 3/84 (3%)
 Frame = -1

Query: 681 IFLTWEDLWVTVSEGS*ASQFF---KVSPATPGRISYYWLSWGHPVPGNLTLLDSLAGRL 511
           +FLTWEDLWVTVS G   S+         A PG +       G    G  TLLD+LAGRL
Sbjct: 2   VFLTWEDLWVTVSNGKKGSKSILQGLTGYAQPGEL---LAIMGPSGCGKSTLLDTLAGRL 58

Query: 510 GSDDTRRSGSLLVNGHEQ*SLAYG 439
           GS +TR++G +L+NGH+Q  LAYG
Sbjct: 59  GS-NTRQTGDILINGHKQ-RLAYG 80


>ref|XP_002525837.1| ATP-binding cassette transporter, putative [Ricinus communis]
           gi|223534842|gb|EEF36531.1| ATP-binding cassette
           transporter, putative [Ricinus communis]
          Length = 701

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 38/81 (46%), Positives = 48/81 (59%)
 Frame = -1

Query: 681 IFLTWEDLWVTVSEGS*ASQFFKVSPATPGRISYYWLSWGHPVPGNLTLLDSLAGRLGSD 502
           +FL WEDLWV VS G   S+          +     +  G    G  TLLD+LAGRLGS 
Sbjct: 70  VFLAWEDLWVNVSNGKKGSKSILQGVTGYAKPGELMVIMGPSGCGKSTLLDALAGRLGS- 128

Query: 501 DTRRSGSLLVNGHEQ*SLAYG 439
           +T +SGS+L+NGH+Q  LAYG
Sbjct: 129 NTSQSGSILINGHKQ-RLAYG 148


>emb|CBI34070.3| unnamed protein product [Vitis vinifera]
          Length = 608

 Score = 63.2 bits (152), Expect = 7e-08
 Identities = 39/81 (48%), Positives = 48/81 (59%)
 Frame = -1

Query: 681 IFLTWEDLWVTVSEGS*ASQFFKVSPATPGRISYYWLSWGHPVPGNLTLLDSLAGRLGSD 502
           +FLTWEDLWVTVS G    +          R        G    G  TLLD+LAGRLGS 
Sbjct: 45  VFLTWEDLWVTVSNGKSGCRSILQGLTGYARPGEVLAIMGPSGCGKSTLLDALAGRLGS- 103

Query: 501 DTRRSGSLLVNGHEQ*SLAYG 439
           +T +SG +LVNGH+Q +L+YG
Sbjct: 104 NTSQSGIILVNGHKQ-ALSYG 123


>ref|XP_002270647.1| PREDICTED: ABC transporter G family member 11 [Vitis vinifera]
          Length = 676

 Score = 63.2 bits (152), Expect = 7e-08
 Identities = 39/81 (48%), Positives = 48/81 (59%)
 Frame = -1

Query: 681 IFLTWEDLWVTVSEGS*ASQFFKVSPATPGRISYYWLSWGHPVPGNLTLLDSLAGRLGSD 502
           +FLTWEDLWVTVS G    +          R        G    G  TLLD+LAGRLGS 
Sbjct: 45  VFLTWEDLWVTVSNGKSGCRSILQGLTGYARPGEVLAIMGPSGCGKSTLLDALAGRLGS- 103

Query: 501 DTRRSGSLLVNGHEQ*SLAYG 439
           +T +SG +LVNGH+Q +L+YG
Sbjct: 104 NTSQSGIILVNGHKQ-ALSYG 123


>gb|AFC36404.1| ABCG1 [Petunia x hybrida]
          Length = 633

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 41/84 (48%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
 Frame = -1

Query: 681 IFLTWEDLWVT---VSEGS*ASQFFKVSPATPGRISYYWLSWGHPVPGNLTLLDSLAGRL 511
           +FLTWEDLWVT   V +GS A        A PG +       G    G  TLLD++AGRL
Sbjct: 21  VFLTWEDLWVTASSVKDGSKAILKGLTGYAMPGEL---LAIMGPSGSGKSTLLDTIAGRL 77

Query: 510 GSDDTRRSGSLLVNGHEQ*SLAYG 439
           GS  TR+SG +L+NG  Q +LAYG
Sbjct: 78  GS-STRQSGDILINGRRQ-TLAYG 99


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