BLASTX nr result

ID: Lithospermum22_contig00004396 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00004396
         (1105 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320236.1| predicted protein [Populus trichocarpa] gi|2...   153   8e-35
ref|XP_002266107.1| PREDICTED: thylakoid membrane phosphoprotein...   152   1e-34
emb|CAN75451.1| hypothetical protein VITISV_028013 [Vitis vinifera]   151   3e-34
gb|ABK95200.1| unknown [Populus trichocarpa]                          150   5e-34
ref|XP_002301447.1| predicted protein [Populus trichocarpa] gi|1...   147   5e-33

>ref|XP_002320236.1| predicted protein [Populus trichocarpa] gi|222861009|gb|EEE98551.1|
           predicted protein [Populus trichocarpa]
          Length = 172

 Score =  153 bits (386), Expect = 8e-35
 Identities = 93/179 (51%), Positives = 108/179 (60%)
 Frame = -3

Query: 782 IIDGKLSRQSATATPSQRVNLPSLPPLPVQFQSRASRTTAFCRKIARNVVAMAAGEAPVA 603
           +ID K SRQSA A+P Q V+LP+LPP PVQ Q+R  + TA+CRKIARNV+ MA GEAP  
Sbjct: 17  LIDAKASRQSAAASP-QCVSLPTLPPPPVQPQNRPWKATAYCRKIARNVMTMATGEAPA- 74

Query: 602 TEVATVETISXXXXXXXXXXXXXXXXXXXXXVKSIQEAWDKVEDKYXXXXXXXXXXXXXX 423
            EVA+ E                        VK++QEAWDKVEDKY              
Sbjct: 75  -EVASTEL--------------------PEIVKTVQEAWDKVEDKYAVSSLVVAGGVALW 113

Query: 422 XXXGMISAIDRXXXXXXXXXXXGIGYTGWFAYKNLIFKPDREALIRKIKDTYNGIIGSS 246
              G+ISAIDR           GIGY+GWFAYKNL+FKPDREALI KIKDTY  +IGSS
Sbjct: 114 GSTGLISAIDRLPLIPGVLELVGIGYSGWFAYKNLVFKPDREALIAKIKDTYREVIGSS 172


>ref|XP_002266107.1| PREDICTED: thylakoid membrane phosphoprotein 14 kDa, chloroplastic
           [Vitis vinifera] gi|296089017|emb|CBI38720.3| unnamed
           protein product [Vitis vinifera]
          Length = 171

 Score =  152 bits (384), Expect = 1e-34
 Identities = 92/179 (51%), Positives = 105/179 (58%)
 Frame = -3

Query: 782 IIDGKLSRQSATATPSQRVNLPSLPPLPVQFQSRASRTTAFCRKIARNVVAMAAGEAPVA 603
           +IDGK  RQSA A+ SQ V LP+LPP PV  Q R  + T +CRKIARNV+AMA GEAP  
Sbjct: 16  LIDGKAPRQSAAAS-SQCVTLPTLPPPPVPSQHRPGKGTTYCRKIARNVIAMATGEAPA- 73

Query: 602 TEVATVETISXXXXXXXXXXXXXXXXXXXXXVKSIQEAWDKVEDKYXXXXXXXXXXXXXX 423
            EV T E                        +K++QEAWDKVEDKY              
Sbjct: 74  -EVGTTEV--------------------PEIIKTVQEAWDKVEDKYAVSSLAAAGFVGLW 112

Query: 422 XXXGMISAIDRXXXXXXXXXXXGIGYTGWFAYKNLIFKPDREALIRKIKDTYNGIIGSS 246
              GM+SAID+           GIGY+GWFAYKNLIFKPDREALI+KIKDTY  IIGSS
Sbjct: 113 VSTGMVSAIDKLPLVPGVLEIVGIGYSGWFAYKNLIFKPDREALIQKIKDTYKEIIGSS 171


>emb|CAN75451.1| hypothetical protein VITISV_028013 [Vitis vinifera]
          Length = 171

 Score =  151 bits (381), Expect = 3e-34
 Identities = 91/179 (50%), Positives = 105/179 (58%)
 Frame = -3

Query: 782 IIDGKLSRQSATATPSQRVNLPSLPPLPVQFQSRASRTTAFCRKIARNVVAMAAGEAPVA 603
           +IDGK  RQSA A+ SQ V LP+LPP PV  Q R  + T +CRKIARNV+AMA GEAP  
Sbjct: 16  LIDGKAPRQSAAAS-SQCVTLPTLPPPPVPSQXRPGKGTTYCRKIARNVIAMATGEAPA- 73

Query: 602 TEVATVETISXXXXXXXXXXXXXXXXXXXXXVKSIQEAWDKVEDKYXXXXXXXXXXXXXX 423
            EV T E                        +K++QEAWDKVEDKY              
Sbjct: 74  -EVGTTEV--------------------PEIIKTVQEAWDKVEDKYAVSSLAAAGFVGLW 112

Query: 422 XXXGMISAIDRXXXXXXXXXXXGIGYTGWFAYKNLIFKPDREALIRKIKDTYNGIIGSS 246
              GM+SAID+           GIGY+GWFAYKNLIFKPDR+ALI+KIKDTY  IIGSS
Sbjct: 113 VSTGMVSAIDKLPLVPGVLEIVGIGYSGWFAYKNLIFKPDRDALIQKIKDTYKEIIGSS 171


>gb|ABK95200.1| unknown [Populus trichocarpa]
          Length = 172

 Score =  150 bits (379), Expect = 5e-34
 Identities = 92/179 (51%), Positives = 107/179 (59%)
 Frame = -3

Query: 782 IIDGKLSRQSATATPSQRVNLPSLPPLPVQFQSRASRTTAFCRKIARNVVAMAAGEAPVA 603
           +ID K SRQSA A+P Q V+LP+LPP PVQ Q+   + TA+CRKIARNV+ MA GEAP  
Sbjct: 17  LIDAKASRQSAAASP-QCVSLPTLPPPPVQPQNGPWKATAYCRKIARNVMTMATGEAPA- 74

Query: 602 TEVATVETISXXXXXXXXXXXXXXXXXXXXXVKSIQEAWDKVEDKYXXXXXXXXXXXXXX 423
            EVA+ E                        VK++QEAWDKVEDKY              
Sbjct: 75  -EVASTEL--------------------PEIVKTVQEAWDKVEDKYAVSSLVVAGGVALW 113

Query: 422 XXXGMISAIDRXXXXXXXXXXXGIGYTGWFAYKNLIFKPDREALIRKIKDTYNGIIGSS 246
              G+ISAIDR           GIGY+GWFAYKNL+FKPDREALI KIKDTY  +IGSS
Sbjct: 114 GSTGLISAIDRLPLIPGVLELVGIGYSGWFAYKNLVFKPDREALIAKIKDTYREVIGSS 172


>ref|XP_002301447.1| predicted protein [Populus trichocarpa] gi|118489574|gb|ABK96589.1|
           unknown [Populus trichocarpa x Populus deltoides]
           gi|222843173|gb|EEE80720.1| predicted protein [Populus
           trichocarpa]
          Length = 172

 Score =  147 bits (371), Expect = 5e-33
 Identities = 89/179 (49%), Positives = 104/179 (58%)
 Frame = -3

Query: 782 IIDGKLSRQSATATPSQRVNLPSLPPLPVQFQSRASRTTAFCRKIARNVVAMAAGEAPVA 603
           +ID K SR SA A+P Q V+LP+LPP PVQ ++R  +  A+CRKIARNV+ MA GEAPVA
Sbjct: 17  LIDAKASRLSAVASP-QCVSLPTLPPPPVQPRNRPWKAAAYCRKIARNVMTMATGEAPVA 75

Query: 602 TEVATVETISXXXXXXXXXXXXXXXXXXXXXVKSIQEAWDKVEDKYXXXXXXXXXXXXXX 423
                +  I                      VK++QEAWDKVEDKY              
Sbjct: 76  VASTDLPEI----------------------VKTVQEAWDKVEDKYAVSSVVVAGGVALW 113

Query: 422 XXXGMISAIDRXXXXXXXXXXXGIGYTGWFAYKNLIFKPDREALIRKIKDTYNGIIGSS 246
              G ISAI+R           GIGYTGWFAYKNL+FKPDREALI KIKDTY  +IGSS
Sbjct: 114 GSAGFISAIERLPLIPGVLELAGIGYTGWFAYKNLVFKPDREALIAKIKDTYKEVIGSS 172


Top