BLASTX nr result

ID: Lithospermum22_contig00004370 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00004370
         (776 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38929.3| unnamed protein product [Vitis vinifera]              243   3e-62
ref|XP_002272092.1| PREDICTED: 40S ribosomal protein S12-like is...   239   5e-61
emb|CBI36518.3| unnamed protein product [Vitis vinifera]              238   1e-60
ref|XP_002279327.1| PREDICTED: 40S ribosomal protein S12 [Vitis ...   235   7e-60
gb|AFW79293.1| hypothetical protein ZEAMMB73_225348 [Zea mays]        231   1e-58

>emb|CBI38929.3| unnamed protein product [Vitis vinifera]
          Length = 228

 Score =  243 bits (620), Expect = 3e-62
 Identities = 120/144 (83%), Positives = 130/144 (90%), Gaps = 1/144 (0%)
 Frame = +1

Query: 133 KKMSGEDVAV-VETPGAVPGPGEPMDIMTALQMVLRKSLAHAGLAKGLDEGAKVIEKHTA 309
           KKMSGE+V V VET    P  GEPMD+MTALQ+VLRKSLAH GLA+GL EGAKVIEKH A
Sbjct: 85  KKMSGEEVVVAVETSAPAPALGEPMDLMTALQLVLRKSLAHGGLARGLHEGAKVIEKHAA 144

Query: 310 QLCVLAEDCDQPDYVKLVKALCADHNVSLITVPSAKTLGEWAGLCKIDSEGKARKVVGCS 489
            LCVLAEDC+QPDYVKLVKALCADHNVSLITVPSAKTLGEWAGLCKIDSEGKARKVVGCS
Sbjct: 145 HLCVLAEDCNQPDYVKLVKALCADHNVSLITVPSAKTLGEWAGLCKIDSEGKARKVVGCS 204

Query: 490 CVVVKDYGEETEGLHIVQEYVKSH 561
           CVVVKD+GEETE +++VQ+ VKSH
Sbjct: 205 CVVVKDFGEETEAMNVVQQQVKSH 228


>ref|XP_002272092.1| PREDICTED: 40S ribosomal protein S12-like isoform 2 [Vitis
           vinifera] gi|225465504|ref|XP_002272051.1| PREDICTED:
           40S ribosomal protein S12-like isoform 1 [Vitis
           vinifera]
          Length = 142

 Score =  239 bits (610), Expect = 5e-61
 Identities = 118/142 (83%), Positives = 128/142 (90%), Gaps = 1/142 (0%)
 Frame = +1

Query: 139 MSGEDVAV-VETPGAVPGPGEPMDIMTALQMVLRKSLAHAGLAKGLDEGAKVIEKHTAQL 315
           MSGE+V V VET    P  GEPMD+MTALQ+VLRKSLAH GLA+GL EGAKVIEKH A L
Sbjct: 1   MSGEEVVVAVETSAPAPALGEPMDLMTALQLVLRKSLAHGGLARGLHEGAKVIEKHAAHL 60

Query: 316 CVLAEDCDQPDYVKLVKALCADHNVSLITVPSAKTLGEWAGLCKIDSEGKARKVVGCSCV 495
           CVLAEDC+QPDYVKLVKALCADHNVSLITVPSAKTLGEWAGLCKIDSEGKARKVVGCSCV
Sbjct: 61  CVLAEDCNQPDYVKLVKALCADHNVSLITVPSAKTLGEWAGLCKIDSEGKARKVVGCSCV 120

Query: 496 VVKDYGEETEGLHIVQEYVKSH 561
           VVKD+GEETE +++VQ+ VKSH
Sbjct: 121 VVKDFGEETEAMNVVQQQVKSH 142


>emb|CBI36518.3| unnamed protein product [Vitis vinifera]
          Length = 177

 Score =  238 bits (607), Expect = 1e-60
 Identities = 117/143 (81%), Positives = 129/143 (90%)
 Frame = +1

Query: 133 KKMSGEDVAVVETPGAVPGPGEPMDIMTALQMVLRKSLAHAGLAKGLDEGAKVIEKHTAQ 312
           +KMSG++  VVE   A P  GE +D+MTALQ+VLRKSLAH GL +GL EGAKVIEKH AQ
Sbjct: 36  RKMSGDEAVVVEA-AAAPPLGETLDLMTALQLVLRKSLAHGGLVRGLHEGAKVIEKHAAQ 94

Query: 313 LCVLAEDCDQPDYVKLVKALCADHNVSLITVPSAKTLGEWAGLCKIDSEGKARKVVGCSC 492
           LCVLAEDC+QPDY+KLVKALCADHNVSLI+VPSAKTLGEWAGLCKIDSEGKARKVVGCSC
Sbjct: 95  LCVLAEDCNQPDYIKLVKALCADHNVSLISVPSAKTLGEWAGLCKIDSEGKARKVVGCSC 154

Query: 493 VVVKDYGEETEGLHIVQEYVKSH 561
           VVVKDYGEET GLHIVQE+VKS+
Sbjct: 155 VVVKDYGEETPGLHIVQEHVKSN 177


>ref|XP_002279327.1| PREDICTED: 40S ribosomal protein S12 [Vitis vinifera]
          Length = 140

 Score =  235 bits (600), Expect = 7e-60
 Identities = 116/141 (82%), Positives = 127/141 (90%)
 Frame = +1

Query: 139 MSGEDVAVVETPGAVPGPGEPMDIMTALQMVLRKSLAHAGLAKGLDEGAKVIEKHTAQLC 318
           MSG++  VVE   A P  GE +D+MTALQ+VLRKSLAH GL +GL EGAKVIEKH AQLC
Sbjct: 1   MSGDEAVVVEA-AAAPPLGETLDLMTALQLVLRKSLAHGGLVRGLHEGAKVIEKHAAQLC 59

Query: 319 VLAEDCDQPDYVKLVKALCADHNVSLITVPSAKTLGEWAGLCKIDSEGKARKVVGCSCVV 498
           VLAEDC+QPDY+KLVKALCADHNVSLI+VPSAKTLGEWAGLCKIDSEGKARKVVGCSCVV
Sbjct: 60  VLAEDCNQPDYIKLVKALCADHNVSLISVPSAKTLGEWAGLCKIDSEGKARKVVGCSCVV 119

Query: 499 VKDYGEETEGLHIVQEYVKSH 561
           VKDYGEET GLHIVQE+VKS+
Sbjct: 120 VKDYGEETPGLHIVQEHVKSN 140


>gb|AFW79293.1| hypothetical protein ZEAMMB73_225348 [Zea mays]
          Length = 156

 Score =  231 bits (589), Expect = 1e-58
 Identities = 115/138 (83%), Positives = 123/138 (89%)
 Frame = +1

Query: 148 EDVAVVETPGAVPGPGEPMDIMTALQMVLRKSLAHAGLAKGLDEGAKVIEKHTAQLCVLA 327
           E VAVVE P   P  GEPMD+MTALQ+V++KS AH GL KGL E AK IEKH AQLCVLA
Sbjct: 21  ETVAVVEAP--TPVLGEPMDLMTALQLVMKKSGAHDGLVKGLREAAKAIEKHAAQLCVLA 78

Query: 328 EDCDQPDYVKLVKALCADHNVSLITVPSAKTLGEWAGLCKIDSEGKARKVVGCSCVVVKD 507
           EDCDQPDYVKLVKALCA+HNV L+TVPSAKTLGEWAGLCKIDSEGKARKVVGCSCVVVKD
Sbjct: 79  EDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDSEGKARKVVGCSCVVVKD 138

Query: 508 YGEETEGLHIVQEYVKSH 561
           YGEE+EGL+IVQEYVKSH
Sbjct: 139 YGEESEGLNIVQEYVKSH 156


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