BLASTX nr result

ID: Lithospermum22_contig00004364 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00004364
         (916 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279785.1| PREDICTED: 60S ribosome subunit biogenesis p...   310   3e-82
ref|XP_002273010.1| PREDICTED: 60S ribosome subunit biogenesis p...   309   5e-82
ref|XP_004134205.1| PREDICTED: 60S ribosome subunit biogenesis p...   303   4e-80
ref|XP_004159812.1| PREDICTED: 60S ribosome subunit biogenesis p...   302   8e-80
gb|AFK43440.1| unknown [Medicago truncatula]                          295   1e-77

>ref|XP_002279785.1| PREDICTED: 60S ribosome subunit biogenesis protein NIP7 homolog
           [Vitis vinifera] gi|147783622|emb|CAN68143.1|
           hypothetical protein VITISV_035660 [Vitis vinifera]
          Length = 187

 Score =  310 bits (794), Expect = 3e-82
 Identities = 154/187 (82%), Positives = 165/187 (88%), Gaps = 3/187 (1%)
 Frame = +2

Query: 41  MRPLDEQETTQVFEKLFKYVGNNLKNIVENPSH---DASSSRYVFRLQKNRVYYVSESLV 211
           MRPLDE ETT VFEKLFK+ GNNLKNIVENPSH   D +  RY FRLQKNRVYYVSESLV
Sbjct: 1   MRPLDENETTAVFEKLFKFTGNNLKNIVENPSHEGPDPNPGRYCFRLQKNRVYYVSESLV 60

Query: 212 KRATNIKRHNLVSLGTQLGKFTKSGKFHLTIQCLGLIAANAKHKVWLKPTSEMSFLYGNH 391
           KRATNI R  LVSLGT +GKFTK GKFHLT+Q + L+AANAKHKVWLKPTSEMSFLYGNH
Sbjct: 61  KRATNIGRAQLVSLGTCIGKFTKGGKFHLTVQSVNLLAANAKHKVWLKPTSEMSFLYGNH 120

Query: 392 VLKGGLGRITENIKENDGVVVFSMSDVPLGFGVAAKSTADCRKMDPNGNVVLHQSDIGEY 571
           VLKGGLGRITENI   DG+VVFSMSDVPLGFG+AAKST DCRK+DPNG VVLHQ+DIGEY
Sbjct: 121 VLKGGLGRITENIVAGDGIVVFSMSDVPLGFGIAAKSTQDCRKLDPNGIVVLHQADIGEY 180

Query: 572 LRMEDDL 592
           LRMED+L
Sbjct: 181 LRMEDEL 187


>ref|XP_002273010.1| PREDICTED: 60S ribosome subunit biogenesis protein NIP7 homolog
           [Vitis vinifera]
          Length = 187

 Score =  309 bits (792), Expect = 5e-82
 Identities = 154/187 (82%), Positives = 166/187 (88%), Gaps = 3/187 (1%)
 Frame = +2

Query: 41  MRPLDEQETTQVFEKLFKYVGNNLKNIVENPSH---DASSSRYVFRLQKNRVYYVSESLV 211
           MRPLDE ETT VFEKLFK+ GNNLKNIVENPS+   D ++ RY FRLQKNRVYYVSES+V
Sbjct: 1   MRPLDENETTAVFEKLFKFTGNNLKNIVENPSYEGPDPNAGRYCFRLQKNRVYYVSESMV 60

Query: 212 KRATNIKRHNLVSLGTQLGKFTKSGKFHLTIQCLGLIAANAKHKVWLKPTSEMSFLYGNH 391
           KRATNI R  LVSLGT +GKFTK GKFHLT+Q + L+AANAKHKVWLKPTSEMSFLYGNH
Sbjct: 61  KRATNIGRAQLVSLGTCIGKFTKGGKFHLTVQSVNLLAANAKHKVWLKPTSEMSFLYGNH 120

Query: 392 VLKGGLGRITENIKENDGVVVFSMSDVPLGFGVAAKSTADCRKMDPNGNVVLHQSDIGEY 571
           VLKGGLGRITENI   DGVVVFSMSDVPLGFG+AAKST DCRK+DPNG VVLHQSDIGEY
Sbjct: 121 VLKGGLGRITENIVAGDGVVVFSMSDVPLGFGIAAKSTQDCRKLDPNGIVVLHQSDIGEY 180

Query: 572 LRMEDDL 592
           LRMED+L
Sbjct: 181 LRMEDEL 187


>ref|XP_004134205.1| PREDICTED: 60S ribosome subunit biogenesis protein NIP7 homolog
           [Cucumis sativus]
          Length = 187

 Score =  303 bits (776), Expect = 4e-80
 Identities = 149/187 (79%), Positives = 163/187 (87%), Gaps = 3/187 (1%)
 Frame = +2

Query: 41  MRPLDEQETTQVFEKLFKYVGNNLKNIVENPSHDASS---SRYVFRLQKNRVYYVSESLV 211
           MRPLDEQETT VFEKL K+ GNNLKNIVENPSH+ +     RY FRL KN+VYYVS+SLV
Sbjct: 1   MRPLDEQETTVVFEKLHKFTGNNLKNIVENPSHEGTEPNPGRYCFRLHKNKVYYVSDSLV 60

Query: 212 KRATNIKRHNLVSLGTQLGKFTKSGKFHLTIQCLGLIAANAKHKVWLKPTSEMSFLYGNH 391
           KRATN+ R NLVSLGT +GKFT  G FHLT+Q LGL++ NAKHKVWLKPTSEMSFLYGNH
Sbjct: 61  KRATNVARSNLVSLGTCIGKFTHGGSFHLTVQSLGLLSPNAKHKVWLKPTSEMSFLYGNH 120

Query: 392 VLKGGLGRITENIKENDGVVVFSMSDVPLGFGVAAKSTADCRKMDPNGNVVLHQSDIGEY 571
           VLKGGLGRITENI   DGVVV+SMSDVPLGFG+AAKST DCRK+DPNG VVLHQSDIGEY
Sbjct: 121 VLKGGLGRITENIVPGDGVVVYSMSDVPLGFGIAAKSTQDCRKLDPNGIVVLHQSDIGEY 180

Query: 572 LRMEDDL 592
           LRMED+L
Sbjct: 181 LRMEDEL 187


>ref|XP_004159812.1| PREDICTED: 60S ribosome subunit biogenesis protein NIP7 homolog
           [Cucumis sativus]
          Length = 187

 Score =  302 bits (773), Expect = 8e-80
 Identities = 148/187 (79%), Positives = 163/187 (87%), Gaps = 3/187 (1%)
 Frame = +2

Query: 41  MRPLDEQETTQVFEKLFKYVGNNLKNIVENPSHDASS---SRYVFRLQKNRVYYVSESLV 211
           MRPLDEQETT VFEKL K+ GNNLKNIV+NPSH+ +     RY FRL KN+VYYVS+SLV
Sbjct: 1   MRPLDEQETTVVFEKLHKFTGNNLKNIVDNPSHEGTEPNPGRYCFRLHKNKVYYVSDSLV 60

Query: 212 KRATNIKRHNLVSLGTQLGKFTKSGKFHLTIQCLGLIAANAKHKVWLKPTSEMSFLYGNH 391
           KRATN+ R NLVSLGT +GKFT  G FHLT+Q LGL++ NAKHKVWLKPTSEMSFLYGNH
Sbjct: 61  KRATNVARSNLVSLGTCIGKFTHGGSFHLTVQSLGLLSPNAKHKVWLKPTSEMSFLYGNH 120

Query: 392 VLKGGLGRITENIKENDGVVVFSMSDVPLGFGVAAKSTADCRKMDPNGNVVLHQSDIGEY 571
           VLKGGLGRITENI   DGVVV+SMSDVPLGFG+AAKST DCRK+DPNG VVLHQSDIGEY
Sbjct: 121 VLKGGLGRITENIVPGDGVVVYSMSDVPLGFGIAAKSTQDCRKLDPNGIVVLHQSDIGEY 180

Query: 572 LRMEDDL 592
           LRMED+L
Sbjct: 181 LRMEDEL 187


>gb|AFK43440.1| unknown [Medicago truncatula]
          Length = 187

 Score =  295 bits (755), Expect = 1e-77
 Identities = 146/187 (78%), Positives = 160/187 (85%), Gaps = 3/187 (1%)
 Frame = +2

Query: 41  MRPLDEQETTQVFEKLFKYVGNNLKNIVENPSH---DASSSRYVFRLQKNRVYYVSESLV 211
           MRPLDE ET+ VFEKLFK+VGNNLKN+VENPSH   D++  RY FRL KN++YY SESLV
Sbjct: 1   MRPLDETETSVVFEKLFKFVGNNLKNLVENPSHEGPDSNPGRYCFRLNKNKIYYCSESLV 60

Query: 212 KRATNIKRHNLVSLGTQLGKFTKSGKFHLTIQCLGLIAANAKHKVWLKPTSEMSFLYGNH 391
           KRATNI R NLVSLGT +GK+T  G FHLT+Q L L+AANAKHKVWLKP SEMSFLYGNH
Sbjct: 61  KRATNIARPNLVSLGTCIGKYTHGGNFHLTVQALNLLAANAKHKVWLKPQSEMSFLYGNH 120

Query: 392 VLKGGLGRITENIKENDGVVVFSMSDVPLGFGVAAKSTADCRKMDPNGNVVLHQSDIGEY 571
           VLK  LGRITENI   DGVVVFSMSDVPLGFGVAAKST DCRK+DPNG VVLHQ DIGEY
Sbjct: 121 VLKSALGRITENIVSGDGVVVFSMSDVPLGFGVAAKSTQDCRKLDPNGIVVLHQGDIGEY 180

Query: 572 LRMEDDL 592
           LR+ED+L
Sbjct: 181 LRIEDEL 187


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