BLASTX nr result

ID: Lithospermum22_contig00004239 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00004239
         (639 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546839.1| PREDICTED: nuclear-pore anchor-like [Glycine...    63   5e-08
ref|XP_002265730.2| PREDICTED: nuclear-pore anchor-like [Vitis v...    59   8e-07
emb|CBI24130.3| unnamed protein product [Vitis vinifera]               59   8e-07
ref|XP_003532900.1| PREDICTED: nuclear-pore anchor-like [Glycine...    58   2e-06

>ref|XP_003546839.1| PREDICTED: nuclear-pore anchor-like [Glycine max]
          Length = 2075

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
 Frame = -3

Query: 571 MPLFMSDDEFARCSHDAMAVAESADAFIRRLYTELDTLKAKDLDKIDGNVSDK-DVIKRL 395
           MPLF+SD+EFARCS D  AVA  ADAFIR L  ELDT++AK  D  D N      +I++ 
Sbjct: 1   MPLFLSDEEFARCSGDGAAVAAKADAFIRGLLHELDTVRAK-ADAADINAEQNCSLIEQK 59

Query: 394 KLAVKKQRDKLEHEKTFSRSS 332
            L++  +  KLE      +SS
Sbjct: 60  YLSLTAEFSKLESNVAELQSS 80


>ref|XP_002265730.2| PREDICTED: nuclear-pore anchor-like [Vitis vinifera]
          Length = 2087

 Score = 58.9 bits (141), Expect = 8e-07
 Identities = 33/81 (40%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
 Frame = -3

Query: 571 MPLFMSDDEFARCSHDAMAVAESADAFIRRLYTELDTLKAK-DLDKIDGNVSDKDVIKRL 395
           MPLF+SD+E++RCS+D   VAE AD+FIR LY EL T+KA+ D   I        ++++ 
Sbjct: 1   MPLFISDEEYSRCSNDVALVAEKADSFIRDLYNELQTVKAQADAASITAE-QTCSLLEQK 59

Query: 394 KLAVKKQRDKLEHEKTFSRSS 332
            +++ ++  KLE +     SS
Sbjct: 60  YISLSQEFSKLESQNAQLNSS 80


>emb|CBI24130.3| unnamed protein product [Vitis vinifera]
          Length = 2088

 Score = 58.9 bits (141), Expect = 8e-07
 Identities = 33/81 (40%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
 Frame = -3

Query: 571 MPLFMSDDEFARCSHDAMAVAESADAFIRRLYTELDTLKAK-DLDKIDGNVSDKDVIKRL 395
           MPLF+SD+E++RCS+D   VAE AD+FIR LY EL T+KA+ D   I        ++++ 
Sbjct: 1   MPLFISDEEYSRCSNDVALVAEKADSFIRDLYNELQTVKAQADAASITAE-QTCSLLEQK 59

Query: 394 KLAVKKQRDKLEHEKTFSRSS 332
            +++ ++  KLE +     SS
Sbjct: 60  YISLSQEFSKLESQNAQLNSS 80


>ref|XP_003532900.1| PREDICTED: nuclear-pore anchor-like [Glycine max]
          Length = 2088

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 27/41 (65%), Positives = 33/41 (80%)
 Frame = -3

Query: 571 MPLFMSDDEFARCSHDAMAVAESADAFIRRLYTELDTLKAK 449
           MPLF+SD+EFA CS D  AVA  ADAFIR L+ ELDT+++K
Sbjct: 1   MPLFLSDEEFAWCSGDGSAVAAKADAFIRGLFNELDTVRSK 41


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