BLASTX nr result
ID: Lithospermum22_contig00004239
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Lithospermum22_contig00004239 (639 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003546839.1| PREDICTED: nuclear-pore anchor-like [Glycine... 63 5e-08 ref|XP_002265730.2| PREDICTED: nuclear-pore anchor-like [Vitis v... 59 8e-07 emb|CBI24130.3| unnamed protein product [Vitis vinifera] 59 8e-07 ref|XP_003532900.1| PREDICTED: nuclear-pore anchor-like [Glycine... 58 2e-06 >ref|XP_003546839.1| PREDICTED: nuclear-pore anchor-like [Glycine max] Length = 2075 Score = 62.8 bits (151), Expect = 5e-08 Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%) Frame = -3 Query: 571 MPLFMSDDEFARCSHDAMAVAESADAFIRRLYTELDTLKAKDLDKIDGNVSDK-DVIKRL 395 MPLF+SD+EFARCS D AVA ADAFIR L ELDT++AK D D N +I++ Sbjct: 1 MPLFLSDEEFARCSGDGAAVAAKADAFIRGLLHELDTVRAK-ADAADINAEQNCSLIEQK 59 Query: 394 KLAVKKQRDKLEHEKTFSRSS 332 L++ + KLE +SS Sbjct: 60 YLSLTAEFSKLESNVAELQSS 80 >ref|XP_002265730.2| PREDICTED: nuclear-pore anchor-like [Vitis vinifera] Length = 2087 Score = 58.9 bits (141), Expect = 8e-07 Identities = 33/81 (40%), Positives = 51/81 (62%), Gaps = 1/81 (1%) Frame = -3 Query: 571 MPLFMSDDEFARCSHDAMAVAESADAFIRRLYTELDTLKAK-DLDKIDGNVSDKDVIKRL 395 MPLF+SD+E++RCS+D VAE AD+FIR LY EL T+KA+ D I ++++ Sbjct: 1 MPLFISDEEYSRCSNDVALVAEKADSFIRDLYNELQTVKAQADAASITAE-QTCSLLEQK 59 Query: 394 KLAVKKQRDKLEHEKTFSRSS 332 +++ ++ KLE + SS Sbjct: 60 YISLSQEFSKLESQNAQLNSS 80 >emb|CBI24130.3| unnamed protein product [Vitis vinifera] Length = 2088 Score = 58.9 bits (141), Expect = 8e-07 Identities = 33/81 (40%), Positives = 51/81 (62%), Gaps = 1/81 (1%) Frame = -3 Query: 571 MPLFMSDDEFARCSHDAMAVAESADAFIRRLYTELDTLKAK-DLDKIDGNVSDKDVIKRL 395 MPLF+SD+E++RCS+D VAE AD+FIR LY EL T+KA+ D I ++++ Sbjct: 1 MPLFISDEEYSRCSNDVALVAEKADSFIRDLYNELQTVKAQADAASITAE-QTCSLLEQK 59 Query: 394 KLAVKKQRDKLEHEKTFSRSS 332 +++ ++ KLE + SS Sbjct: 60 YISLSQEFSKLESQNAQLNSS 80 >ref|XP_003532900.1| PREDICTED: nuclear-pore anchor-like [Glycine max] Length = 2088 Score = 57.8 bits (138), Expect = 2e-06 Identities = 27/41 (65%), Positives = 33/41 (80%) Frame = -3 Query: 571 MPLFMSDDEFARCSHDAMAVAESADAFIRRLYTELDTLKAK 449 MPLF+SD+EFA CS D AVA ADAFIR L+ ELDT+++K Sbjct: 1 MPLFLSDEEFAWCSGDGSAVAAKADAFIRGLFNELDTVRSK 41