BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00004184
         (523 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517553.1| pentatricopeptide repeat-containing protein,...    99   5e-19
ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containi...    91   1e-16
emb|CBI36234.3| unnamed protein product [Vitis vinifera]               91   1e-16
ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containi...    87   1e-15
ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    77   2e-12

>ref|XP_002517553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223543185|gb|EEF44717.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 653

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 59/151 (39%), Positives = 93/151 (61%), Gaps = 5/151 (3%)
 Frame = +3

Query: 84  MALSSKSQPISLNSHHFNTQLIKPNNLKSFHFSYILQNSLNFSIRKSHHHHSLHSPNASI 263
           MA S+K+  I L   H +++   PN+  S H ++    + +F   K+H   SL SP  S+
Sbjct: 1   MAFSAKTSQIPL---HLDSKT--PNSSNSQHPNFRKALAFSFKPLKTHPFSSLKSPKTSL 55

Query: 264 SST----LTTTIDHNLHIYQLCIKGQVQESIRYLRKIREFHESIEEETFVCVIRLCEYKR 431
           ++T     TT    N H+ QLC++G+++ +I++L  ++E    +E+ETF+ +IRLCE KR
Sbjct: 56  TTTNTSLSTTQNPTNSHLLQLCLEGKLEHAIKHLNSMQELKILVEDETFIALIRLCENKR 115

Query: 432 ALDEGCFVYEFILN-LTTQLSLRLGNALLSM 521
              EG +V++ +LN L   LS+RLGNALLSM
Sbjct: 116 GYTEGDYVFKAVLNSLVNPLSVRLGNALLSM 146


>ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Vitis vinifera]
          Length = 872

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 54/146 (36%), Positives = 88/146 (60%)
 Frame = +3

Query: 84  MALSSKSQPISLNSHHFNTQLIKPNNLKSFHFSYILQNSLNFSIRKSHHHHSLHSPNASI 263
           MA+S+K   I L ++  N    K +  K  +FS  +Q     S+RK HH  S+ +P++  
Sbjct: 1   MAVSAKIPAIHLQTNLPNPHHSKTHKPKPLNFSRNIQTR-QISLRK-HHEISVLNPSS-- 56

Query: 264 SSTLTTTIDHNLHIYQLCIKGQVQESIRYLRKIREFHESIEEETFVCVIRLCEYKRALDE 443
                T  + N  I +LC+KG +++++ +L  ++E   S+EEET++ ++RLCE+KRA  E
Sbjct: 57  ----ITAQNPNSLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASE 112

Query: 444 GCFVYEFILNLTTQLSLRLGNALLSM 521
           G  V+ ++    T+L +RLGNALLSM
Sbjct: 113 GSRVHSYVSKTVTRLGVRLGNALLSM 138


>emb|CBI36234.3| unnamed protein product [Vitis vinifera]
          Length = 906

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 54/146 (36%), Positives = 88/146 (60%)
 Frame = +3

Query: 84  MALSSKSQPISLNSHHFNTQLIKPNNLKSFHFSYILQNSLNFSIRKSHHHHSLHSPNASI 263
           MA+S+K   I L ++  N    K +  K  +FS  +Q     S+RK HH  S+ +P++  
Sbjct: 1   MAVSAKIPAIHLQTNLPNPHHSKTHKPKPLNFSRNIQTR-QISLRK-HHEISVLNPSS-- 56

Query: 264 SSTLTTTIDHNLHIYQLCIKGQVQESIRYLRKIREFHESIEEETFVCVIRLCEYKRALDE 443
                T  + N  I +LC+KG +++++ +L  ++E   S+EEET++ ++RLCE+KRA  E
Sbjct: 57  ----ITAQNPNSLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASE 112

Query: 444 GCFVYEFILNLTTQLSLRLGNALLSM 521
           G  V+ ++    T+L +RLGNALLSM
Sbjct: 113 GSRVHSYVSKTVTRLGVRLGNALLSM 138


>ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Glycine max]
          Length = 882

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 47/122 (38%), Positives = 74/122 (60%), Gaps = 14/122 (11%)
 Frame = +3

Query: 198 SLNFSIRK---SHHHHSLHSP-----------NASISSTLTTTIDHNLHIYQLCIKGQVQ 335
           S NF ++    SH+ H+LH P           +A+ +++L++  + N HIYQLC+ G + 
Sbjct: 29  SSNFKLKTFTFSHNLHTLHPPFRKAKHICVSNSATTTTSLSSNHNPNSHIYQLCLLGNLD 88

Query: 336 ESIRYLRKIREFHESIEEETFVCVIRLCEYKRALDEGCFVYEFILNLTTQLSLRLGNALL 515
            ++ YL  + E    +E++ +V +IRLCE+KRA  EG  VY ++    + LSL+LGNALL
Sbjct: 89  RAMSYLDSMHELRIPVEDDAYVALIRLCEWKRARKEGSRVYSYVSISMSHLSLQLGNALL 148

Query: 516 SM 521
           SM
Sbjct: 149 SM 150


>ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g15510, chloroplastic-like [Cucumis sativus]
          Length = 878

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 48/147 (32%), Positives = 86/147 (58%), Gaps = 1/147 (0%)
 Frame = +3

Query: 84  MALSSKSQPISLNSHHFNTQLIKPNNLKSFHFSYILQNSLNFSIRKSHHHHSLHSPNASI 263
           MA+ ++S  +       N Q+   +N K+  FS  LQ   + ++RK+     +    A++
Sbjct: 1   MAVFAQSSHLLTYLDRSNPQVPNNHNPKTLSFSKNLQTHKH-TLRKTQE---ISVVGAAV 56

Query: 264 S-STLTTTIDHNLHIYQLCIKGQVQESIRYLRKIREFHESIEEETFVCVIRLCEYKRALD 440
           S S +  T   NL + +LC++G ++++++ L  + E    +EE+ ++ ++RLCE++RA D
Sbjct: 57  SHSAIDQT--QNLELRELCLQGNLEQAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPD 114

Query: 441 EGCFVYEFILNLTTQLSLRLGNALLSM 521
           EG  VYE + +  + L +RLGNALLSM
Sbjct: 115 EGSRVYELVSSSKSCLCVRLGNALLSM 141