BLASTX nr result

ID: Lithospermum22_contig00004160 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00004160
         (720 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADR71306.1| 50S ribosomal protein L20 [Hevea brasiliensis]         219   3e-55
ref|XP_002301732.1| predicted protein [Populus trichocarpa] gi|2...   217   2e-54
ref|XP_002530749.1| 50S ribosomal protein L20, putative [Ricinus...   214   2e-53
ref|XP_004139908.1| PREDICTED: 50S ribosomal protein L20-like is...   211   1e-52
ref|XP_002890186.1| predicted protein [Arabidopsis lyrata subsp....   211   1e-52

>gb|ADR71306.1| 50S ribosomal protein L20 [Hevea brasiliensis]
          Length = 125

 Score =  219 bits (559), Expect = 3e-55
 Identities = 109/125 (87%), Positives = 116/125 (92%), Gaps = 1/125 (0%)
 Frame = -2

Query: 629 MNKKEVLKLAKGFRGRAKNCIRIARERVEKALQYAYRDRRNKKRDMRSLWIQRINAGSRQ 450
           MNKKEVLKLAKGFRGRAKNCIRIARERVEKALQY+YRDRRNKKRDMRSLWIQRINAG+RQ
Sbjct: 1   MNKKEVLKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQ 60

Query: 449 HGVNYGNFVHGLMKENIQLNRKVLSELAMHEPYSFKALVDISKSSFPGNKKPTAPP-KVG 273
           HGVNYGNF+HGLMKENIQLNRKVLSEL+MHEPYSFKALVDIS ++FPGNK    PP KV 
Sbjct: 61  HGVNYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALVDISHNAFPGNKNVVLPPRKVN 120

Query: 272 LQILV 258
           + I V
Sbjct: 121 ISINV 125


>ref|XP_002301732.1| predicted protein [Populus trichocarpa] gi|222843458|gb|EEE81005.1|
           predicted protein [Populus trichocarpa]
          Length = 126

 Score =  217 bits (552), Expect = 2e-54
 Identities = 102/117 (87%), Positives = 112/117 (95%)
 Frame = -2

Query: 629 MNKKEVLKLAKGFRGRAKNCIRIARERVEKALQYAYRDRRNKKRDMRSLWIQRINAGSRQ 450
           MNKKE+ KLAKGFRGRAKNCIRIARERVEKALQY+YRDRRNKKRDMRSLWIQRINAG+RQ
Sbjct: 1   MNKKEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQ 60

Query: 449 HGVNYGNFVHGLMKENIQLNRKVLSELAMHEPYSFKALVDISKSSFPGNKKPTAPPK 279
           HGVNYGNF+HGLMKENIQLNRKVLSE++MHEPYSFKALVDIS+++FPGNK    PP+
Sbjct: 61  HGVNYGNFMHGLMKENIQLNRKVLSEISMHEPYSFKALVDISRNAFPGNKNVVHPPR 117


>ref|XP_002530749.1| 50S ribosomal protein L20, putative [Ricinus communis]
           gi|223529713|gb|EEF31655.1| 50S ribosomal protein L20,
           putative [Ricinus communis]
          Length = 224

 Score =  214 bits (544), Expect = 2e-53
 Identities = 102/117 (87%), Positives = 111/117 (94%)
 Frame = -2

Query: 629 MNKKEVLKLAKGFRGRAKNCIRIARERVEKALQYAYRDRRNKKRDMRSLWIQRINAGSRQ 450
           MNKKE+ KLAKGFRGRAKNCIRIARERVEKALQY+YRDRRNKKRDMRSLWIQRINAG+RQ
Sbjct: 1   MNKKEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQ 60

Query: 449 HGVNYGNFVHGLMKENIQLNRKVLSELAMHEPYSFKALVDISKSSFPGNKKPTAPPK 279
           HGVNYGNF+HGLMKENIQLNRKVLSEL+MHEPYSFKALVDIS+++ PGNK    PP+
Sbjct: 61  HGVNYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALVDISRNTNPGNKNLVFPPR 117


>ref|XP_004139908.1| PREDICTED: 50S ribosomal protein L20-like isoform 1 [Cucumis
           sativus] gi|449444292|ref|XP_004139909.1| PREDICTED: 50S
           ribosomal protein L20-like isoform 2 [Cucumis sativus]
           gi|449444294|ref|XP_004139910.1| PREDICTED: 50S
           ribosomal protein L20-like isoform 3 [Cucumis sativus]
           gi|449444296|ref|XP_004139911.1| PREDICTED: 50S
           ribosomal protein L20-like isoform 4 [Cucumis sativus]
           gi|449475856|ref|XP_004154571.1| PREDICTED: 50S
           ribosomal protein L20-like isoform 1 [Cucumis sativus]
           gi|449475859|ref|XP_004154572.1| PREDICTED: 50S
           ribosomal protein L20-like isoform 2 [Cucumis sativus]
           gi|449475863|ref|XP_004154573.1| PREDICTED: 50S
           ribosomal protein L20-like isoform 3 [Cucumis sativus]
          Length = 125

 Score =  211 bits (537), Expect = 1e-52
 Identities = 99/117 (84%), Positives = 110/117 (94%)
 Frame = -2

Query: 629 MNKKEVLKLAKGFRGRAKNCIRIARERVEKALQYAYRDRRNKKRDMRSLWIQRINAGSRQ 450
           MNK ++ KLAKGFRGRAKNCIRIARERVEKALQY+YRDRRNKKRDMRSLWIQRINAG+R 
Sbjct: 1   MNKDKIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRL 60

Query: 449 HGVNYGNFVHGLMKENIQLNRKVLSELAMHEPYSFKALVDISKSSFPGNKKPTAPPK 279
           HGVNYGNF+HGLMKEN+QLNRKVLSE++MHEPYSFKALVDIS+++FPGNK    PPK
Sbjct: 61  HGVNYGNFMHGLMKENVQLNRKVLSEISMHEPYSFKALVDISRNAFPGNKNVVFPPK 117


>ref|XP_002890186.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297336028|gb|EFH66445.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 126

 Score =  211 bits (537), Expect = 1e-52
 Identities = 99/110 (90%), Positives = 107/110 (97%)
 Frame = -2

Query: 629 MNKKEVLKLAKGFRGRAKNCIRIARERVEKALQYAYRDRRNKKRDMRSLWIQRINAGSRQ 450
           MNKKE+ KLAKGFRGRAKNCIRIARERVEKALQY+YRDRRNKKR+MR LWI+RINAGSRQ
Sbjct: 1   MNKKEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKREMRGLWIERINAGSRQ 60

Query: 449 HGVNYGNFVHGLMKENIQLNRKVLSELAMHEPYSFKALVDISKSSFPGNK 300
           HGVNYGNF+HGLMKENIQLNRKVLSEL+MHEPYSFKALVD+S+ SFPGNK
Sbjct: 61  HGVNYGNFIHGLMKENIQLNRKVLSELSMHEPYSFKALVDVSRKSFPGNK 110


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