BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00004148
         (1029 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB86262.1| unknown [Solanum tuberosum]                            320   5e-85
ref|XP_002285426.1| PREDICTED: heterogeneous nuclear ribonucleop...   195   1e-47
ref|XP_002299908.1| predicted protein [Populus trichocarpa] gi|2...   194   4e-47
ref|XP_002313339.1| predicted protein [Populus trichocarpa] gi|2...   192   1e-46
ref|XP_002513501.1| heterogeneous nuclear ribonucleoprotein, put...   191   2e-46

>gb|ABB86262.1| unknown [Solanum tuberosum]
          Length = 364

 Score =  320 bits (819), Expect = 5e-85
 Identities = 162/252 (64%), Positives = 201/252 (79%), Gaps = 2/252 (0%)
 Frame = -3

Query: 1027 DFALKRNKQNIGRRYVEVFRSKRQEYYKAIAHEXXXXXXXXXXXXXXXXXXXXXXAEHTG 848
            DFAL+RN+QNIGRRYVEVFRSK++EYYKAIA+E                       EHTG
Sbjct: 114  DFALQRNRQNIGRRYVEVFRSKKEEYYKAIANEVYDSRGGSVPRARSADESKTLP-EHTG 172

Query: 847  VLRMRGLPFSATKEDIVDFFKDFVLAEEKIHITTDSIGRPTGEAYVEFANAEDSKAAMAN 668
            VL +RGLPFSA+KEDI+DFFKDF L E+ IHIT    GRPTGEA+VEFA+A+DS+AAMA 
Sbjct: 173  VLWLRGLPFSASKEDIIDFFKDFELPEKSIHITATFEGRPTGEAFVEFASADDSRAAMAK 232

Query: 667  DRMTLGSRYIELFPSAPDELTEAVSKGRV--KSVDGEDVVEPTTVIRMRGLPFSARKKDV 494
            DRMT+G+RYIELF S+ +EL EAVS+GRV  K VDG D  E T+++RMRGLPFSA K D+
Sbjct: 233  DRMTIGNRYIELFASSSEELEEAVSRGRVLEKPVDGRDPNEVTSILRMRGLPFSAGKDDI 292

Query: 493  IEFFKDFTLPDDSVYLTFNSEGRPTGEAFVEFSSADDAKAALTKDRMTLGSRYIELFAST 314
            ++FFKDF L +D++++TF S+GRPTGEAFVEF+S DDAKAAL KDRMTLGSRY+ELF S+
Sbjct: 293  MDFFKDFALTEDAIHVTFLSDGRPTGEAFVEFASTDDAKAALAKDRMTLGSRYVELFPSS 352

Query: 313  LDELNDALARGR 278
            ++++N A++RGR
Sbjct: 353  IEDMNHAISRGR 364



 Score =  167 bits (423), Expect = 4e-39
 Identities = 92/201 (45%), Positives = 132/201 (65%), Gaps = 11/201 (5%)
 Frame = -3

Query: 847 VLRMRGLPFSATKEDIVDFFKDFVLAEEKIHITTDSIGRPTGEAYVEFANAEDSKAAMAN 668
           V+R+RGLPF  ++ +I DF     + +    +     GR TGEAY           A+  
Sbjct: 63  VVRLRGLPFDCSETEIADFLHGLDVVDV---LLVHKGGRFTGEAYCVLGYPLQVDFALQR 119

Query: 667 DRMTLGSRYIELFPSAPDELTEAV------SKG----RVKSVD-GEDVVEPTTVIRMRGL 521
           +R  +G RY+E+F S  +E  +A+      S+G    R +S D  + + E T V+ +RGL
Sbjct: 120 NRQNIGRRYVEVFRSKKEEYYKAIANEVYDSRGGSVPRARSADESKTLPEHTGVLWLRGL 179

Query: 520 PFSARKKDVIEFFKDFTLPDDSVYLTFNSEGRPTGEAFVEFSSADDAKAALTKDRMTLGS 341
           PFSA K+D+I+FFKDF LP+ S+++T   EGRPTGEAFVEF+SADD++AA+ KDRMT+G+
Sbjct: 180 PFSASKEDIIDFFKDFELPEKSIHITATFEGRPTGEAFVEFASADDSRAAMAKDRMTIGN 239

Query: 340 RYIELFASTLDELNDALARGR 278
           RYIELFAS+ +EL +A++RGR
Sbjct: 240 RYIELFASSSEELEEAVSRGR 260


>ref|XP_002285426.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like [Vitis
            vinifera]
          Length = 258

 Score =  195 bits (496), Expect = 1e-47
 Identities = 101/151 (66%), Positives = 118/151 (78%), Gaps = 3/151 (1%)
 Frame = -3

Query: 1027 DFALKRNKQNIGRRYVEVFRSKRQEYYKAIAHEXXXXXXXXXXXXXXXXXXXXXXAE--- 857
            +FAL+RN+QN+GRRYVEVFRSKRQEYYKAIA+E                       E   
Sbjct: 108  EFALQRNRQNMGRRYVEVFRSKRQEYYKAIANEVSDTRGGSPRRTAPKAKSNDEGKESAE 167

Query: 856  HTGVLRMRGLPFSATKEDIVDFFKDFVLAEEKIHITTDSIGRPTGEAYVEFANAEDSKAA 677
            HTGVLR+RGLPFSA+KEDI+DFFKDFVL+E+ IH+T +S GRPTGEA+VEF NAEDSKAA
Sbjct: 168  HTGVLRLRGLPFSASKEDIMDFFKDFVLSEDSIHMTVNSEGRPTGEAFVEFTNAEDSKAA 227

Query: 676  MANDRMTLGSRYIELFPSAPDELTEAVSKGR 584
            MA DRMTLGSRYIELFPS+ +EL EAV++GR
Sbjct: 228  MAKDRMTLGSRYIELFPSSLEELDEAVARGR 258



 Score =  177 bits (448), Expect = 5e-42
 Identities = 94/205 (45%), Positives = 136/205 (66%), Gaps = 15/205 (7%)
 Frame = -3

Query: 847 VLRMRGLPFSATKEDIVDFFKDFVLAEEKIHITTDSIGRPTGEAYVEFANAEDSKAAMAN 668
           V+R+RGLPF  ++ D+ +FF    + +    +     GR TGEA+         + A+  
Sbjct: 57  VVRLRGLPFDCSEADVAEFFHSLDIVDV---LFVHKNGRFTGEAFCVLGYPLQVEFALQR 113

Query: 667 DRMTLGSRYIELFPSAPDELTEAVSKG--------------RVKSVD-GEDVVEPTTVIR 533
           +R  +G RY+E+F S   E  +A++                + KS D G++  E T V+R
Sbjct: 114 NRQNMGRRYVEVFRSKRQEYYKAIANEVSDTRGGSPRRTAPKAKSNDEGKESAEHTGVLR 173

Query: 532 MRGLPFSARKKDVIEFFKDFTLPDDSVYLTFNSEGRPTGEAFVEFSSADDAKAALTKDRM 353
           +RGLPFSA K+D+++FFKDF L +DS+++T NSEGRPTGEAFVEF++A+D+KAA+ KDRM
Sbjct: 174 LRGLPFSASKEDIMDFFKDFVLSEDSIHMTVNSEGRPTGEAFVEFTNAEDSKAAMAKDRM 233

Query: 352 TLGSRYIELFASTLDELNDALARGR 278
           TLGSRYIELF S+L+EL++A+ARGR
Sbjct: 234 TLGSRYIELFPSSLEELDEAVARGR 258



 Score = 60.1 bits (144), Expect = 9e-07
 Identities = 34/88 (38%), Positives = 46/88 (52%)
 Frame = -3

Query: 550 PTTVIRMRGLPFSARKKDVIEFFKDFTLPDDSVYLTFNSEGRPTGEAFVEFSSADDAKAA 371
           P  V+R+RGLPF   + DV EFF    + D    L  +  GR TGEAF         + A
Sbjct: 54  PFPVVRLRGLPFDCSEADVAEFFHSLDIVD---VLFVHKNGRFTGEAFCVLGYPLQVEFA 110

Query: 370 LTKDRMTLGSRYIELFASTLDELNDALA 287
           L ++R  +G RY+E+F S   E   A+A
Sbjct: 111 LQRNRQNMGRRYVEVFRSKRQEYYKAIA 138


>ref|XP_002299908.1| predicted protein [Populus trichocarpa] gi|222847166|gb|EEE84713.1|
            predicted protein [Populus trichocarpa]
          Length = 253

 Score =  194 bits (492), Expect = 4e-47
 Identities = 101/150 (67%), Positives = 118/150 (78%), Gaps = 2/150 (1%)
 Frame = -3

Query: 1027 DFALKRNKQNIGRRYVEVFRSKRQEYYKAIAHEXXXXXXXXXXXXXXXXXXXXXXA--EH 854
            DFAL++N+QN+GRRYVEVFRSKRQ+YYKAIA+E                         EH
Sbjct: 104  DFALQKNRQNMGRRYVEVFRSKRQDYYKAIANEVSESRGSPRRNISRAKSYDEGKDLAEH 163

Query: 853  TGVLRMRGLPFSATKEDIVDFFKDFVLAEEKIHITTDSIGRPTGEAYVEFANAEDSKAAM 674
            TGVLR+RGLPFSA K+DI++FFKDFVL+E+ IHIT +S GRPTGEA+VEFANAEDSKAAM
Sbjct: 164  TGVLRLRGLPFSAGKDDIMEFFKDFVLSEDLIHITMNSEGRPTGEAFVEFANAEDSKAAM 223

Query: 673  ANDRMTLGSRYIELFPSAPDELTEAVSKGR 584
            A DRMTLGSRYIELFPS+ +EL EAVS+GR
Sbjct: 224  AKDRMTLGSRYIELFPSSIEELDEAVSRGR 253



 Score =  177 bits (450), Expect = 3e-42
 Identities = 93/204 (45%), Positives = 135/204 (66%), Gaps = 14/204 (6%)
 Frame = -3

Query: 847 VLRMRGLPFSATKEDIVDFFKDFVLAEEKIHITTDSIGRPTGEAYVEFANAEDSKAAMAN 668
           V+R+RGLPF  T+ D+ +FF+   + +    +     G+ TGEA+           A+  
Sbjct: 53  VVRLRGLPFDCTETDVAEFFRGLDIVDV---LFVHKGGKFTGEAFCVLGYPLQVDFALQK 109

Query: 667 DRMTLGSRYIELFPSAPDELTEAVSK-------------GRVKSVD-GEDVVEPTTVIRM 530
           +R  +G RY+E+F S   +  +A++               R KS D G+D+ E T V+R+
Sbjct: 110 NRQNMGRRYVEVFRSKRQDYYKAIANEVSESRGSPRRNISRAKSYDEGKDLAEHTGVLRL 169

Query: 529 RGLPFSARKKDVIEFFKDFTLPDDSVYLTFNSEGRPTGEAFVEFSSADDAKAALTKDRMT 350
           RGLPFSA K D++EFFKDF L +D +++T NSEGRPTGEAFVEF++A+D+KAA+ KDRMT
Sbjct: 170 RGLPFSAGKDDIMEFFKDFVLSEDLIHITMNSEGRPTGEAFVEFANAEDSKAAMAKDRMT 229

Query: 349 LGSRYIELFASTLDELNDALARGR 278
           LGSRYIELF S+++EL++A++RGR
Sbjct: 230 LGSRYIELFPSSIEELDEAVSRGR 253



 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 33/88 (37%), Positives = 46/88 (52%)
 Frame = -3

Query: 550 PTTVIRMRGLPFSARKKDVIEFFKDFTLPDDSVYLTFNSEGRPTGEAFVEFSSADDAKAA 371
           P  V+R+RGLPF   + DV EFF+   + D    L  +  G+ TGEAF           A
Sbjct: 50  PFPVVRLRGLPFDCTETDVAEFFRGLDIVD---VLFVHKGGKFTGEAFCVLGYPLQVDFA 106

Query: 370 LTKDRMTLGSRYIELFASTLDELNDALA 287
           L K+R  +G RY+E+F S   +   A+A
Sbjct: 107 LQKNRQNMGRRYVEVFRSKRQDYYKAIA 134


>ref|XP_002313339.1| predicted protein [Populus trichocarpa] gi|222849747|gb|EEE87294.1|
            predicted protein [Populus trichocarpa]
          Length = 253

 Score =  192 bits (488), Expect = 1e-46
 Identities = 99/150 (66%), Positives = 117/150 (78%), Gaps = 2/150 (1%)
 Frame = -3

Query: 1027 DFALKRNKQNIGRRYVEVFRSKRQEYYKAIAHEXXXXXXXXXXXXXXXXXXXXXXA--EH 854
            DFAL++N+QN+GRRYVEVFRSKRQ+YYK IA+E                         EH
Sbjct: 104  DFALQKNRQNMGRRYVEVFRSKRQDYYKTIANEVSESRGSPRRNIPRAKSYDEGKDSAEH 163

Query: 853  TGVLRMRGLPFSATKEDIVDFFKDFVLAEEKIHITTDSIGRPTGEAYVEFANAEDSKAAM 674
            TGVLR+RGLPFSA+K+DI++FFKDFVL+E+ IHIT +S GRPTGEA+VEFANAEDSKAAM
Sbjct: 164  TGVLRLRGLPFSASKDDIMEFFKDFVLSEDSIHITMNSEGRPTGEAFVEFANAEDSKAAM 223

Query: 673  ANDRMTLGSRYIELFPSAPDELTEAVSKGR 584
            A DRMTLGSRYIELFPS+ +E  EAVS+GR
Sbjct: 224  AKDRMTLGSRYIELFPSSVEESDEAVSRGR 253



 Score =  174 bits (440), Expect = 4e-41
 Identities = 94/207 (45%), Positives = 135/207 (65%), Gaps = 14/207 (6%)
 Frame = -3

Query: 856 HTGVLRMRGLPFSATKEDIVDFFKDFVLAEEKIHITTDSIGRPTGEAYVEFANAEDSKAA 677
           H  V+R+RGLPF  T+ D+ +FF    + +    +     G+ +GEA+           A
Sbjct: 50  HFPVVRLRGLPFDCTETDVAEFFHGLDIVDV---LFVHKGGKFSGEAFCVLGYPLQVDFA 106

Query: 676 MANDRMTLGSRYIELFPSAPDELTEAV------SKG-------RVKSVD-GEDVVEPTTV 539
           +  +R  +G RY+E+F S   +  + +      S+G       R KS D G+D  E T V
Sbjct: 107 LQKNRQNMGRRYVEVFRSKRQDYYKTIANEVSESRGSPRRNIPRAKSYDEGKDSAEHTGV 166

Query: 538 IRMRGLPFSARKKDVIEFFKDFTLPDDSVYLTFNSEGRPTGEAFVEFSSADDAKAALTKD 359
           +R+RGLPFSA K D++EFFKDF L +DS+++T NSEGRPTGEAFVEF++A+D+KAA+ KD
Sbjct: 167 LRLRGLPFSASKDDIMEFFKDFVLSEDSIHITMNSEGRPTGEAFVEFANAEDSKAAMAKD 226

Query: 358 RMTLGSRYIELFASTLDELNDALARGR 278
           RMTLGSRYIELF S+++E ++A++RGR
Sbjct: 227 RMTLGSRYIELFPSSVEESDEAVSRGR 253


>ref|XP_002513501.1| heterogeneous nuclear ribonucleoprotein, putative [Ricinus communis]
            gi|223547409|gb|EEF48904.1| heterogeneous nuclear
            ribonucleoprotein, putative [Ricinus communis]
          Length = 260

 Score =  191 bits (485), Expect = 2e-46
 Identities = 98/150 (65%), Positives = 118/150 (78%), Gaps = 2/150 (1%)
 Frame = -3

Query: 1027 DFALKRNKQNIGRRYVEVFRSKRQEYYKAIAHEXXXXXXXXXXXXXXXXXXXXXXA--EH 854
            DFAL++N+QN+GRRYVEVFRSKRQ+YYKAIA+E                         EH
Sbjct: 111  DFALQKNRQNMGRRYVEVFRSKRQDYYKAIANEVSDARGGSPRRAPRAKSYDEGKDSAEH 170

Query: 853  TGVLRMRGLPFSATKEDIVDFFKDFVLAEEKIHITTDSIGRPTGEAYVEFANAEDSKAAM 674
            TGVLR+RGLPFSA K+DI++FFKDFVL+E+ +HIT +S GRPTGEA+VEFA+AEDSKAAM
Sbjct: 171  TGVLRLRGLPFSAGKDDIMEFFKDFVLSEDSVHITMNSEGRPTGEAFVEFASAEDSKAAM 230

Query: 673  ANDRMTLGSRYIELFPSAPDELTEAVSKGR 584
            A DRMTLGSRYIELFPS+ +EL EAV++GR
Sbjct: 231  AKDRMTLGSRYIELFPSSIEELEEAVTRGR 260



 Score =  177 bits (449), Expect = 4e-42
 Identities = 96/204 (47%), Positives = 132/204 (64%), Gaps = 14/204 (6%)
 Frame = -3

Query: 847 VLRMRGLPFSATKEDIVDFFKDFVLAEEKIHITTDSIGRPTGEAYVEFANAEDSKAAMAN 668
           V+R+RGLPF  T+ D+ +FF    + +    +     G+ TGEA+           A+  
Sbjct: 60  VVRLRGLPFDCTETDVAEFFHGLDIVDV---LFVHKGGKFTGEAFCVLGCPLQVDFALQK 116

Query: 667 DRMTLGSRYIELFPSAPDELTEAVSKG-------------RVKSVD-GEDVVEPTTVIRM 530
           +R  +G RY+E+F S   +  +A++               R KS D G+D  E T V+R+
Sbjct: 117 NRQNMGRRYVEVFRSKRQDYYKAIANEVSDARGGSPRRAPRAKSYDEGKDSAEHTGVLRL 176

Query: 529 RGLPFSARKKDVIEFFKDFTLPDDSVYLTFNSEGRPTGEAFVEFSSADDAKAALTKDRMT 350
           RGLPFSA K D++EFFKDF L +DSV++T NSEGRPTGEAFVEF+SA+D+KAA+ KDRMT
Sbjct: 177 RGLPFSAGKDDIMEFFKDFVLSEDSVHITMNSEGRPTGEAFVEFASAEDSKAAMAKDRMT 236

Query: 349 LGSRYIELFASTLDELNDALARGR 278
           LGSRYIELF S+++EL +A+ RGR
Sbjct: 237 LGSRYIELFPSSIEELEEAVTRGR 260



 Score = 57.4 bits (137), Expect = 6e-06
 Identities = 33/88 (37%), Positives = 45/88 (51%)
 Frame = -3

Query: 550 PTTVIRMRGLPFSARKKDVIEFFKDFTLPDDSVYLTFNSEGRPTGEAFVEFSSADDAKAA 371
           P  V+R+RGLPF   + DV EFF    + D    L  +  G+ TGEAF           A
Sbjct: 57  PFPVVRLRGLPFDCTETDVAEFFHGLDIVD---VLFVHKGGKFTGEAFCVLGCPLQVDFA 113

Query: 370 LTKDRMTLGSRYIELFASTLDELNDALA 287
           L K+R  +G RY+E+F S   +   A+A
Sbjct: 114 LQKNRQNMGRRYVEVFRSKRQDYYKAIA 141