BLASTX nr result

ID: Lithospermum22_contig00004127 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00004127
         (1105 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24303.3| unnamed protein product [Vitis vinifera]              341   2e-91
ref|XP_002266622.1| PREDICTED: THO complex subunit 7 homolog iso...   341   2e-91
gb|ABK96424.1| unknown [Populus trichocarpa x Populus deltoides]      340   4e-91
ref|XP_002319257.1| predicted protein [Populus trichocarpa] gi|2...   340   5e-91
ref|XP_002520058.1| conserved hypothetical protein [Ricinus comm...   335   1e-89

>emb|CBI24303.3| unnamed protein product [Vitis vinifera]
          Length = 267

 Score =  341 bits (875), Expect = 2e-91
 Identities = 174/241 (72%), Positives = 201/241 (83%)
 Frame = -3

Query: 1061 MLARSRKVSGRGETAAGHYAFGPQEDDIIIKXXXXXXXXXXRGEPPLKKLQKKFTAFAME 882
            ML + RKVSGRGE  A HYAFGP EDD IIK          RGEPPLKKLQKKFT+F +E
Sbjct: 28   MLVKGRKVSGRGEAMAAHYAFGP-EDDTIIKHRLLTRTTTTRGEPPLKKLQKKFTSFTLE 86

Query: 881  VEKDSDNVSDCERLAKTFLQELNTFEIPLLKSRAVIDANVREKENFEELKDEINRQILQA 702
            +EKD+DN SDCERL+K FLQE+ TFEIPLLKS+AVIDAN+REKENF ELKD+INR ILQA
Sbjct: 87   IEKDTDNFSDCERLSKAFLQEMTTFEIPLLKSKAVIDANLREKENFNELKDDINRMILQA 146

Query: 701  EIDIEDLKKQLEESKIERQHKEECEAIRRLIATQPPRVQTQKAINDLEKEIALLEAENTA 522
            + DIEDLKKQLEESKIERQHKEECEAIRRLIA QPPR +T+K I++LE EIA LEAENTA
Sbjct: 147  QADIEDLKKQLEESKIERQHKEECEAIRRLIAMQPPRSETEKIISELENEIAALEAENTA 206

Query: 521  SSRTLELRKKQFTLLLHVVDELQNTIEDEQKSLMEEMRMAMDDQKNAIDDDDGRPVAMSI 342
             SRTLELRKKQF LLLHVVDELQNTIE+EQK+L+EE+R   ++ KN ++D +G   AM++
Sbjct: 207  GSRTLELRKKQFALLLHVVDELQNTIEEEQKNLIEEIRSLTEEHKNGMEDGNGVSEAMAV 266

Query: 341  E 339
            +
Sbjct: 267  D 267


>ref|XP_002266622.1| PREDICTED: THO complex subunit 7 homolog isoform 1 [Vitis vinifera]
            gi|359479144|ref|XP_003632225.1| PREDICTED: THO complex
            subunit 7 homolog isoform 2 [Vitis vinifera]
            gi|359479146|ref|XP_003632226.1| PREDICTED: THO complex
            subunit 7 homolog isoform 3 [Vitis vinifera]
          Length = 240

 Score =  341 bits (875), Expect = 2e-91
 Identities = 174/241 (72%), Positives = 201/241 (83%)
 Frame = -3

Query: 1061 MLARSRKVSGRGETAAGHYAFGPQEDDIIIKXXXXXXXXXXRGEPPLKKLQKKFTAFAME 882
            ML + RKVSGRGE  A HYAFGP EDD IIK          RGEPPLKKLQKKFT+F +E
Sbjct: 1    MLVKGRKVSGRGEAMAAHYAFGP-EDDTIIKHRLLTRTTTTRGEPPLKKLQKKFTSFTLE 59

Query: 881  VEKDSDNVSDCERLAKTFLQELNTFEIPLLKSRAVIDANVREKENFEELKDEINRQILQA 702
            +EKD+DN SDCERL+K FLQE+ TFEIPLLKS+AVIDAN+REKENF ELKD+INR ILQA
Sbjct: 60   IEKDTDNFSDCERLSKAFLQEMTTFEIPLLKSKAVIDANLREKENFNELKDDINRMILQA 119

Query: 701  EIDIEDLKKQLEESKIERQHKEECEAIRRLIATQPPRVQTQKAINDLEKEIALLEAENTA 522
            + DIEDLKKQLEESKIERQHKEECEAIRRLIA QPPR +T+K I++LE EIA LEAENTA
Sbjct: 120  QADIEDLKKQLEESKIERQHKEECEAIRRLIAMQPPRSETEKIISELENEIAALEAENTA 179

Query: 521  SSRTLELRKKQFTLLLHVVDELQNTIEDEQKSLMEEMRMAMDDQKNAIDDDDGRPVAMSI 342
             SRTLELRKKQF LLLHVVDELQNTIE+EQK+L+EE+R   ++ KN ++D +G   AM++
Sbjct: 180  GSRTLELRKKQFALLLHVVDELQNTIEEEQKNLIEEIRSLTEEHKNGMEDGNGVSEAMAV 239

Query: 341  E 339
            +
Sbjct: 240  D 240


>gb|ABK96424.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 240

 Score =  340 bits (872), Expect = 4e-91
 Identities = 171/240 (71%), Positives = 201/240 (83%)
 Frame = -3

Query: 1058 LARSRKVSGRGETAAGHYAFGPQEDDIIIKXXXXXXXXXXRGEPPLKKLQKKFTAFAMEV 879
            + + RK+SGRGET A +YAFGP EDD+IIK          RGEPPLKKLQKKF ++  E+
Sbjct: 1    MLKGRKISGRGETVAANYAFGPLEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFASYVSEI 60

Query: 878  EKDSDNVSDCERLAKTFLQELNTFEIPLLKSRAVIDANVREKENFEELKDEINRQILQAE 699
            EKD DN +DC +L+K FLQEL+TFEIPLLKS+AVID+NVREKENF ELKD+INRQILQA+
Sbjct: 61   EKDEDNYNDCVKLSKAFLQELSTFEIPLLKSKAVIDSNVREKENFNELKDDINRQILQAQ 120

Query: 698  IDIEDLKKQLEESKIERQHKEECEAIRRLIATQPPRVQTQKAINDLEKEIALLEAENTAS 519
             DIEDLKKQLEESKIERQHKEECEAIR+LIATQPPR   QK I DLEKEIA LEAENTAS
Sbjct: 121  ADIEDLKKQLEESKIERQHKEECEAIRKLIATQPPRSLMQKVITDLEKEIAALEAENTAS 180

Query: 518  SRTLELRKKQFTLLLHVVDELQNTIEDEQKSLMEEMRMAMDDQKNAIDDDDGRPVAMSIE 339
            SR LELRKKQF LLLHVVDELQNTIE+++K+L+EEMR+A ++QKN ++D  G   AM+++
Sbjct: 181  SRLLELRKKQFVLLLHVVDELQNTIEEDEKNLIEEMRVATEEQKNGMEDAGGVSEAMAVD 240


>ref|XP_002319257.1| predicted protein [Populus trichocarpa] gi|222857633|gb|EEE95180.1|
            predicted protein [Populus trichocarpa]
          Length = 240

 Score =  340 bits (871), Expect = 5e-91
 Identities = 171/240 (71%), Positives = 200/240 (83%)
 Frame = -3

Query: 1058 LARSRKVSGRGETAAGHYAFGPQEDDIIIKXXXXXXXXXXRGEPPLKKLQKKFTAFAMEV 879
            + + RK+SGRGET A +YAFGP EDD+IIK          RGEPPLKKLQKKF ++  E+
Sbjct: 1    MLKGRKISGRGETVAANYAFGPLEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFASYVSEI 60

Query: 878  EKDSDNVSDCERLAKTFLQELNTFEIPLLKSRAVIDANVREKENFEELKDEINRQILQAE 699
            EKD DN  DC +L+K FLQEL+TFEIPLLKS+AVID+NVREKENF ELKD+INRQILQA+
Sbjct: 61   EKDEDNYHDCVKLSKAFLQELSTFEIPLLKSKAVIDSNVREKENFNELKDDINRQILQAQ 120

Query: 698  IDIEDLKKQLEESKIERQHKEECEAIRRLIATQPPRVQTQKAINDLEKEIALLEAENTAS 519
             DIEDLKKQLEESKIERQHKEECEAIR+LIATQPPR   QK I DLEKEIA LEAENTAS
Sbjct: 121  ADIEDLKKQLEESKIERQHKEECEAIRKLIATQPPRSLMQKVITDLEKEIAALEAENTAS 180

Query: 518  SRTLELRKKQFTLLLHVVDELQNTIEDEQKSLMEEMRMAMDDQKNAIDDDDGRPVAMSIE 339
            SR LELRKKQF LLLHVVDELQNTIE+++K+L+EEMR+A ++QKN ++D  G   AM+++
Sbjct: 181  SRLLELRKKQFVLLLHVVDELQNTIEEDEKNLIEEMRVATEEQKNGMEDTGGVSEAMAVD 240


>ref|XP_002520058.1| conserved hypothetical protein [Ricinus communis]
            gi|223540822|gb|EEF42382.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 242

 Score =  335 bits (859), Expect = 1e-89
 Identities = 174/241 (72%), Positives = 200/241 (82%), Gaps = 1/241 (0%)
 Frame = -3

Query: 1058 LARSRKVSGRGETAAGHYAFGPQEDDIIIKXXXXXXXXXXRGEPPLKKLQKKFTAFAMEV 879
            + + RK+SGRGET A +YAFGP EDDI+IK          RGEPPLKKLQKKFT+F +EV
Sbjct: 1    MLKGRKISGRGETVAANYAFGPLEDDIVIKHRLLTRTTTTRGEPPLKKLQKKFTSFVVEV 60

Query: 878  EK-DSDNVSDCERLAKTFLQELNTFEIPLLKSRAVIDANVREKENFEELKDEINRQILQA 702
            EK D DN +DC RL+K FLQEL+TFEIPLLKS+AVIDAN+REKENF EL DEI RQI QA
Sbjct: 61   EKNDEDNYNDCVRLSKAFLQELSTFEIPLLKSKAVIDANLREKENFTELIDEITRQISQA 120

Query: 701  EIDIEDLKKQLEESKIERQHKEECEAIRRLIATQPPRVQTQKAINDLEKEIALLEAENTA 522
            + DIEDLKKQLEESKIERQHKEECEAIR+LIA QPPR +TQK I DLEKEIA LEAEN A
Sbjct: 121  QDDIEDLKKQLEESKIERQHKEECEAIRKLIAMQPPRSETQKLIEDLEKEIAGLEAENIA 180

Query: 521  SSRTLELRKKQFTLLLHVVDELQNTIEDEQKSLMEEMRMAMDDQKNAIDDDDGRPVAMSI 342
             SR LELRKKQF LLLHVVDELQN+IE++QK+L+EEMRMA +DQKN ++D DG   AM++
Sbjct: 181  GSRLLELRKKQFALLLHVVDELQNSIEEDQKNLIEEMRMATEDQKNGMEDADGGSEAMAV 240

Query: 341  E 339
            +
Sbjct: 241  D 241


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