BLASTX nr result

ID: Lithospermum22_contig00004109 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00004109
         (849 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323855.1| predicted protein [Populus trichocarpa] gi|2...   117   3e-24
ref|XP_002306048.1| predicted protein [Populus trichocarpa] gi|2...   113   6e-23
ref|NP_974373.1| mini zinc finger 2 [Arabidopsis thaliana] gi|92...   112   1e-22
ref|XP_002875479.1| hypothetical protein ARALYDRAFT_484661 [Arab...   112   1e-22
ref|XP_002514762.1| transcription factor, putative [Ricinus comm...   112   1e-22

>ref|XP_002323855.1| predicted protein [Populus trichocarpa] gi|222866857|gb|EEF03988.1|
           predicted protein [Populus trichocarpa]
          Length = 96

 Score =  117 bits (294), Expect = 3e-24
 Identities = 58/94 (61%), Positives = 67/94 (71%), Gaps = 7/94 (7%)
 Frame = -1

Query: 564 KRQVVVKRA-------VPSSVSLRTVRYVECQKNHAASVGGYAVDGCREFMPCGDEGTDG 406
           KRQVVV+R+         SS ++R V+Y ECQKNHAA VGGYAVDGCREFM  G+EGT  
Sbjct: 3   KRQVVVRRSEEPSRSSTTSSFTIRNVKYGECQKNHAAGVGGYAVDGCREFMASGEEGTAA 62

Query: 405 ALVCAACSCHRNFHRREVDNXXXXXXXSPTSNGH 304
           AL CAAC CHRNFHRREV+        SP+SNG+
Sbjct: 63  ALTCAACGCHRNFHRREVETEVACDCSSPSSNGN 96


>ref|XP_002306048.1| predicted protein [Populus trichocarpa] gi|222849012|gb|EEE86559.1|
           predicted protein [Populus trichocarpa]
          Length = 130

 Score =  113 bits (282), Expect = 6e-23
 Identities = 56/93 (60%), Positives = 66/93 (70%), Gaps = 6/93 (6%)
 Frame = -1

Query: 564 KRQVVVKR------AVPSSVSLRTVRYVECQKNHAASVGGYAVDGCREFMPCGDEGTDGA 403
           KRQV V+R      +  +S ++R V+Y EC KNHAASVGGYAVDGCREFM  G+EGT  A
Sbjct: 38  KRQVAVRRTEEPSRSSTTSFTIRNVKYGECLKNHAASVGGYAVDGCREFMASGEEGTADA 97

Query: 402 LVCAACSCHRNFHRREVDNXXXXXXXSPTSNGH 304
           L CAAC CHRNFHRREV+        SP+SNG+
Sbjct: 98  LTCAACGCHRNFHRREVETEVICDCSSPSSNGN 130


>ref|NP_974373.1| mini zinc finger 2 [Arabidopsis thaliana]
           gi|9294233|dbj|BAB02135.1| unnamed protein product
           [Arabidopsis thaliana] gi|21555769|gb|AAM63930.1|
           unknown [Arabidopsis thaliana]
           gi|62319539|dbj|BAD94968.1| hypothetical protein
           [Arabidopsis thaliana] gi|88900352|gb|ABD57488.1|
           At3g28917 [Arabidopsis thaliana]
           gi|332643985|gb|AEE77506.1| mini zinc finger 2
           [Arabidopsis thaliana]
          Length = 100

 Score =  112 bits (280), Expect = 1e-22
 Identities = 58/98 (59%), Positives = 69/98 (70%), Gaps = 11/98 (11%)
 Frame = -1

Query: 564 KRQVVVKRAVP----------SSVSLRTVRYVECQKNHAASVGGYAVDGCREFMPC-GDE 418
           KRQVV++RA P          SS+++RTVRY ECQKNHAA+VGGYAVDGCREFM   G+E
Sbjct: 3   KRQVVLRRASPEEPSRSSSTASSLTVRTVRYGECQKNHAAAVGGYAVDGCREFMASRGEE 62

Query: 417 GTDGALVCAACSCHRNFHRREVDNXXXXXXXSPTSNGH 304
           GT  AL CAAC CHR+FHRRE++        SP S G+
Sbjct: 63  GTVAALTCAACGCHRSFHRREIETEVVCDCNSPPSTGN 100


>ref|XP_002875479.1| hypothetical protein ARALYDRAFT_484661 [Arabidopsis lyrata subsp.
           lyrata] gi|297321317|gb|EFH51738.1| hypothetical protein
           ARALYDRAFT_484661 [Arabidopsis lyrata subsp. lyrata]
          Length = 100

 Score =  112 bits (279), Expect = 1e-22
 Identities = 58/98 (59%), Positives = 69/98 (70%), Gaps = 11/98 (11%)
 Frame = -1

Query: 564 KRQVVVKRAVP----------SSVSLRTVRYVECQKNHAASVGGYAVDGCREFMPC-GDE 418
           KRQVV++RA P          SS+++RTVRY ECQKNHAA+VGGYAVDGCREFM   G+E
Sbjct: 3   KRQVVLRRASPEEPSRSSSTASSLTVRTVRYGECQKNHAAAVGGYAVDGCREFMASRGEE 62

Query: 417 GTDGALVCAACSCHRNFHRREVDNXXXXXXXSPTSNGH 304
           GT  AL CAAC CHR+FHRRE++        SP S G+
Sbjct: 63  GTLAALTCAACGCHRSFHRREIETEVVCDCNSPPSTGN 100


>ref|XP_002514762.1| transcription factor, putative [Ricinus communis]
           gi|223546366|gb|EEF47868.1| transcription factor,
           putative [Ricinus communis]
          Length = 95

 Score =  112 bits (279), Expect = 1e-22
 Identities = 54/91 (59%), Positives = 64/91 (70%), Gaps = 6/91 (6%)
 Frame = -1

Query: 564 KRQVVVKRAVP------SSVSLRTVRYVECQKNHAASVGGYAVDGCREFMPCGDEGTDGA 403
           KRQVV+KR V       SS  +R VRY ECQKNHAA++GGYAVDGCREFM  G++  +GA
Sbjct: 4   KRQVVLKRDVSGRASTTSSSVVRNVRYGECQKNHAANIGGYAVDGCREFMASGEDAANGA 63

Query: 402 LVCAACSCHRNFHRREVDNXXXXXXXSPTSN 310
           L+CAAC CHRNFHRREV+         P S+
Sbjct: 64  LICAACGCHRNFHRREVETEVVCEYSPPNSS 94


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