BLASTX nr result
ID: Lithospermum22_contig00003998
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00003998
(653 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AEX00355.1| IAA12 [Solanum lycopersicum] 108 2e-34
ref|XP_002526541.1| Auxin-responsive protein IAA13, putative [Ri... 99 1e-29
ref|XP_002269922.2| PREDICTED: auxin-responsive protein IAA11-li... 95 2e-28
ref|XP_002528346.1| Auxin-responsive protein IAA13, putative [Ri... 94 2e-25
gb|ABK94046.1| unknown [Populus trichocarpa] 91 2e-25
>gb|AEX00355.1| IAA12 [Solanum lycopersicum]
Length = 313
Score = 108 bits (271), Expect(2) = 2e-34
Identities = 75/163 (46%), Positives = 86/163 (52%), Gaps = 10/163 (6%)
Frame = -2
Query: 460 MNSLTNHAKPPISEEFSSSVEKHETGNNIEK--SKKTTN---EKRLVSSSLLVKVNMDGX 296
MN+L N K P EEFS + EK ++ N I S K N EK LV +SL VKVN
Sbjct: 134 MNTLVNQTKLPPPEEFSVTNEKCKSKNTIANAGSSKINNFAKEKGLVKASLFVKVN---- 189
Query: 295 XXXXXXXXXXXXXXXXXXXXXXVKVNMDGHAIGRKVDLNAHQSYEALAETLDDMFHKPST 116
MDG IGRKVDLNAH SYE LA+TLD+MF +PST
Sbjct: 190 --------------------------MDGVTIGRKVDLNAHNSYENLAQTLDNMFLRPST 223
Query: 115 TMTTKSRLDLE-----GQAGIGGLLDGSSDFVLTYEDKDGDWM 2
T+ +S E LLDGSS+FVLTYEDKDGDWM
Sbjct: 224 TVCARSSNVQELGVMSETTSSSRLLDGSSEFVLTYEDKDGDWM 266
Score = 63.2 bits (152), Expect(2) = 2e-34
Identities = 28/35 (80%), Positives = 30/35 (85%)
Frame = -3
Query: 630 GTKRGADSVSPPCSGVSQVVGWPPIRAYRMNSLTN 526
GTKR ADS+SPP S VSQVVGWPPIR YRMN+L N
Sbjct: 105 GTKRNADSISPPRSSVSQVVGWPPIRTYRMNTLVN 139
>ref|XP_002526541.1| Auxin-responsive protein IAA13, putative [Ricinus communis]
gi|223534102|gb|EEF35819.1| Auxin-responsive protein
IAA13, putative [Ricinus communis]
Length = 300
Score = 99.0 bits (245), Expect(2) = 1e-29
Identities = 66/160 (41%), Positives = 85/160 (53%), Gaps = 7/160 (4%)
Frame = -2
Query: 460 MNSLTNHAKPPISEEFSSSVEKHETGNN--IEKSKKTTNEKRLVSSSLLVKVNMDGXXXX 287
MNS+ N AK ++EF+S V ++ GNN +EK+K +N +S +
Sbjct: 137 MNSMVNQAKSMAADEFNSVVGGNK-GNNTLVEKTKNGSNMNNSISKA------------- 182
Query: 286 XXXXXXXXXXXXXXXXXXXVKVNMDGHAIGRKVDLNAHQSYEALAETLDDMFHKPSTTMT 107
VKVNMDG IGRKVDL+AH YEALA+TL+DMF +P+ T+
Sbjct: 183 --------------RTSLFVKVNMDGIPIGRKVDLSAHGCYEALAQTLEDMFLQPTPTIN 228
Query: 106 TKSRLDLEGQAGIGG-----LLDGSSDFVLTYEDKDGDWM 2
E G LLDGSS+FVLTYEDK+GDWM
Sbjct: 229 ALRPSATEHNIMADGTRRPTLLDGSSEFVLTYEDKEGDWM 268
Score = 57.0 bits (136), Expect(2) = 1e-29
Identities = 28/37 (75%), Positives = 30/37 (81%), Gaps = 2/37 (5%)
Frame = -3
Query: 630 GTKRGADSVS--PPCSGVSQVVGWPPIRAYRMNSLTN 526
GTKR ADSVS PP + SQVVGWPPIRAYRMNS+ N
Sbjct: 106 GTKRSADSVSAAPPNAASSQVVGWPPIRAYRMNSMVN 142
>ref|XP_002269922.2| PREDICTED: auxin-responsive protein IAA11-like [Vitis vinifera]
Length = 296
Score = 94.7 bits (234), Expect(2) = 2e-28
Identities = 61/153 (39%), Positives = 81/153 (52%)
Frame = -2
Query: 460 MNSLTNHAKPPISEEFSSSVEKHETGNNIEKSKKTTNEKRLVSSSLLVKVNMDGXXXXXX 281
MNSL N +K ++E+ +S VEK ++ N + ++ T N + K ++
Sbjct: 128 MNSLANQSKSLVTEDLNSMVEKSKSTNTMVEN--TYNGSNNTNGYAKKKGPLN------- 178
Query: 280 XXXXXXXXXXXXXXXXXVKVNMDGHAIGRKVDLNAHQSYEALAETLDDMFHKPSTTMTTK 101
VKVNMDG IGRKVDL+AH YE LA+TL++MF P+TT+
Sbjct: 179 -------------TSFFVKVNMDGIPIGRKVDLSAHSCYETLAKTLEEMFQGPTTTVNAI 225
Query: 100 SRLDLEGQAGIGGLLDGSSDFVLTYEDKDGDWM 2
LLDGSSDFVLTYEDK+GDWM
Sbjct: 226 E------STRPSKLLDGSSDFVLTYEDKEGDWM 252
Score = 57.0 bits (136), Expect(2) = 2e-28
Identities = 27/35 (77%), Positives = 29/35 (82%)
Frame = -3
Query: 630 GTKRGADSVSPPCSGVSQVVGWPPIRAYRMNSLTN 526
GTKR ADSV+ +G SQVVGWPPIRAYRMNSL N
Sbjct: 99 GTKRRADSVAASNNGSSQVVGWPPIRAYRMNSLAN 133
>ref|XP_002528346.1| Auxin-responsive protein IAA13, putative [Ricinus communis]
gi|223532214|gb|EEF34018.1| Auxin-responsive protein
IAA13, putative [Ricinus communis]
Length = 318
Score = 94.0 bits (232), Expect(2) = 2e-25
Identities = 65/159 (40%), Positives = 80/159 (50%), Gaps = 6/159 (3%)
Frame = -2
Query: 460 MNSLTNHAKPPISEEFSSSVEKHETGN------NIEKSKKTTNEKRLVSSSLLVKVNMDG 299
+NSL N AK SEE S VE+ ++ + N K+ T NEK +
Sbjct: 150 INSLVNQAKASRSEEDKSVVEQDKSKDASKKICNGSKTNATNNEKGHLG----------- 198
Query: 298 XXXXXXXXXXXXXXXXXXXXXXXVKVNMDGHAIGRKVDLNAHQSYEALAETLDDMFHKPS 119
VKVNMDG IGRKVDLNAH SYE LA+TL+DMF + S
Sbjct: 199 ----------------------FVKVNMDGIPIGRKVDLNAHASYETLAQTLEDMFFR-S 235
Query: 118 TTMTTKSRLDLEGQAGIGGLLDGSSDFVLTYEDKDGDWM 2
T + + + LLDGSS+FVLTYEDK+GDWM
Sbjct: 236 TPSINSTGGEKQQSTKPSKLLDGSSEFVLTYEDKEGDWM 274
Score = 47.8 bits (112), Expect(2) = 2e-25
Identities = 23/38 (60%), Positives = 27/38 (71%), Gaps = 3/38 (7%)
Frame = -3
Query: 630 GTKRGADSVSPPC---SGVSQVVGWPPIRAYRMNSLTN 526
GTKR ADSVS + SQ+VGWPP+R YR+NSL N
Sbjct: 118 GTKRAADSVSHEGGSPTAASQIVGWPPVRTYRINSLVN 155
>gb|ABK94046.1| unknown [Populus trichocarpa]
Length = 303
Score = 90.5 bits (223), Expect(2) = 2e-25
Identities = 62/156 (39%), Positives = 79/156 (50%), Gaps = 3/156 (1%)
Frame = -2
Query: 460 MNSLTNHAKPPISEEFSSSVEKHETGNNIEKSKKTTNEKRLVSSSLLVKVNMDGXXXXXX 281
MNSL + AK +EE EK ++ N++K N K N G
Sbjct: 135 MNSLVSQAKAARAEEDKGIGEKDKSKENLKKKICNGN-----------KTNATGNEKGHL 183
Query: 280 XXXXXXXXXXXXXXXXXVKVNMDGHAIGRKVDLNAHQSYEALAETLDDMFHKPSTTMTTK 101
VKVNMDG IGRKVDLNAH YE LA+ L++MF + +TT+ +
Sbjct: 184 GF---------------VKVNMDGVPIGRKVDLNAHACYETLAQALEEMFFRSTTTINS- 227
Query: 100 SRLDLEGQ---AGIGGLLDGSSDFVLTYEDKDGDWM 2
+ GQ + LLDGSS+FVLTYEDK+GDWM
Sbjct: 228 ----IGGQKPLSKFSKLLDGSSEFVLTYEDKEGDWM 259
Score = 51.2 bits (121), Expect(2) = 2e-25
Identities = 28/39 (71%), Positives = 30/39 (76%), Gaps = 4/39 (10%)
Frame = -3
Query: 630 GTKRGADSVS----PPCSGVSQVVGWPPIRAYRMNSLTN 526
GTKR ADSVS P +G SQVVGWPPIRAYRMNSL +
Sbjct: 103 GTKRAADSVSHEGGSPTAG-SQVVGWPPIRAYRMNSLVS 140