BLASTX nr result

ID: Lithospermum22_contig00003949 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00003949
         (741 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001062288.2| Os08g0524600 [Oryza sativa Japonica Group] g...   223   4e-56
gb|EEC84833.1| hypothetical protein OsI_31924 [Oryza sativa Indi...   222   6e-56
gb|EEE69996.1| hypothetical protein OsJ_29906 [Oryza sativa Japo...   222   6e-56
ref|NP_001063584.1| Os09g0502000 [Oryza sativa Japonica Group] g...   222   6e-56
pdb|3IZR|HH Chain h, Localization Of The Large Subunit Ribosomal...   221   1e-55

>ref|NP_001062288.2| Os08g0524600 [Oryza sativa Japonica Group]
           gi|255678588|dbj|BAF24202.2| Os08g0524600, partial
           [Oryza sativa Japonica Group]
          Length = 151

 Score =  223 bits (567), Expect = 4e-56
 Identities = 110/135 (81%), Positives = 115/135 (85%)
 Frame = +2

Query: 128 ETMAVPLLSXXXXXXXXXXXXXPHHDRYIGLKPSWRRPKGIDSRVRRKFKGCVLMPNIGY 307
           E MAVPLL+             PH DRY+ LKPSWRRPKGIDSRVRRKFKGC LMPNIGY
Sbjct: 17  EEMAVPLLTKKIVKKRVKQFKRPHSDRYLCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGY 76

Query: 308 GSDKKTRHYLPNGFKKFVVHNVQELEVLMMHNRRYCAEIAHDVSTKKRKDIVERAAQLDI 487
           GSDKKTRHYLPN FKKFVVHNV ELE+LMMHNR YCAEIAH+VSTKKRK+IVERAAQLDI
Sbjct: 77  GSDKKTRHYLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDI 136

Query: 488 VVTNKLARLRSQEDE 532
           VVTNKLARLRSQEDE
Sbjct: 137 VVTNKLARLRSQEDE 151


>gb|EEC84833.1| hypothetical protein OsI_31924 [Oryza sativa Indica Group]
          Length = 171

 Score =  222 bits (566), Expect = 6e-56
 Identities = 110/133 (82%), Positives = 114/133 (85%)
 Frame = +2

Query: 134 MAVPLLSXXXXXXXXXXXXXPHHDRYIGLKPSWRRPKGIDSRVRRKFKGCVLMPNIGYGS 313
           MAVPLL+             PH DRYIGLK SWRRPKGIDSRVRRKFKGC LMPNIGYGS
Sbjct: 39  MAVPLLTKKIVKKRVKQFKRPHSDRYIGLKTSWRRPKGIDSRVRRKFKGCTLMPNIGYGS 98

Query: 314 DKKTRHYLPNGFKKFVVHNVQELEVLMMHNRRYCAEIAHDVSTKKRKDIVERAAQLDIVV 493
           DKKTRHYLPN FKKFVVHNV ELE+LMMHNR YCAEIAH+VSTKKRK+IVERAAQLDIVV
Sbjct: 99  DKKTRHYLPNKFKKFVVHNVSELELLMMHNRMYCAEIAHNVSTKKRKEIVERAAQLDIVV 158

Query: 494 TNKLARLRSQEDE 532
           TNKLARLRSQEDE
Sbjct: 159 TNKLARLRSQEDE 171


>gb|EEE69996.1| hypothetical protein OsJ_29906 [Oryza sativa Japonica Group]
          Length = 170

 Score =  222 bits (566), Expect = 6e-56
 Identities = 110/133 (82%), Positives = 114/133 (85%)
 Frame = +2

Query: 134 MAVPLLSXXXXXXXXXXXXXPHHDRYIGLKPSWRRPKGIDSRVRRKFKGCVLMPNIGYGS 313
           MAVPLL+             PH DRYIGLK SWRRPKGIDSRVRRKFKGC LMPNIGYGS
Sbjct: 38  MAVPLLTKKIVKKRVKQFKRPHSDRYIGLKTSWRRPKGIDSRVRRKFKGCTLMPNIGYGS 97

Query: 314 DKKTRHYLPNGFKKFVVHNVQELEVLMMHNRRYCAEIAHDVSTKKRKDIVERAAQLDIVV 493
           DKKTRHYLPN FKKFVVHNV ELE+LMMHNR YCAEIAH+VSTKKRK+IVERAAQLDIVV
Sbjct: 98  DKKTRHYLPNKFKKFVVHNVSELELLMMHNRMYCAEIAHNVSTKKRKEIVERAAQLDIVV 157

Query: 494 TNKLARLRSQEDE 532
           TNKLARLRSQEDE
Sbjct: 158 TNKLARLRSQEDE 170


>ref|NP_001063584.1| Os09g0502000 [Oryza sativa Japonica Group]
           gi|113631817|dbj|BAF25498.1| Os09g0502000 [Oryza sativa
           Japonica Group] gi|125564262|gb|EAZ09642.1| hypothetical
           protein OsI_31926 [Oryza sativa Indica Group]
           gi|125606230|gb|EAZ45266.1| hypothetical protein
           OsJ_29908 [Oryza sativa Japonica Group]
           gi|215767820|dbj|BAH00049.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 133

 Score =  222 bits (566), Expect = 6e-56
 Identities = 110/133 (82%), Positives = 114/133 (85%)
 Frame = +2

Query: 134 MAVPLLSXXXXXXXXXXXXXPHHDRYIGLKPSWRRPKGIDSRVRRKFKGCVLMPNIGYGS 313
           MAVPLL+             PH DRYIGLK SWRRPKGIDSRVRRKFKGC LMPNIGYGS
Sbjct: 1   MAVPLLTKKIVKKRVKQFKRPHSDRYIGLKTSWRRPKGIDSRVRRKFKGCTLMPNIGYGS 60

Query: 314 DKKTRHYLPNGFKKFVVHNVQELEVLMMHNRRYCAEIAHDVSTKKRKDIVERAAQLDIVV 493
           DKKTRHYLPN FKKFVVHNV ELE+LMMHNR YCAEIAH+VSTKKRK+IVERAAQLDIVV
Sbjct: 61  DKKTRHYLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDIVV 120

Query: 494 TNKLARLRSQEDE 532
           TNKLARLRSQEDE
Sbjct: 121 TNKLARLRSQEDE 133


>pdb|3IZR|HH Chain h, Localization Of The Large Subunit Ribosomal Proteins Into
           A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s
           Ribosome gi|76057835|emb|CAH55765.1| ribosomal L32
           [Oryza sativa Indica Group] gi|218202405|gb|EEC84832.1|
           hypothetical protein OsI_31922 [Oryza sativa Indica
           Group]
          Length = 133

 Score =  221 bits (563), Expect = 1e-55
 Identities = 109/133 (81%), Positives = 114/133 (85%)
 Frame = +2

Query: 134 MAVPLLSXXXXXXXXXXXXXPHHDRYIGLKPSWRRPKGIDSRVRRKFKGCVLMPNIGYGS 313
           MAVPLL+             PH DRYIGLK SWRRPKGIDSRVRRKFKGC LMPNIGYGS
Sbjct: 1   MAVPLLTKKIVKKRVKQFKRPHSDRYIGLKTSWRRPKGIDSRVRRKFKGCTLMPNIGYGS 60

Query: 314 DKKTRHYLPNGFKKFVVHNVQELEVLMMHNRRYCAEIAHDVSTKKRKDIVERAAQLDIVV 493
           DKKTRHYLPN FKKFVVHNV ELE+LMMHNR YCAEIAH+VST+KRK+IVERAAQLDIVV
Sbjct: 61  DKKTRHYLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTRKRKEIVERAAQLDIVV 120

Query: 494 TNKLARLRSQEDE 532
           TNKLARLRSQEDE
Sbjct: 121 TNKLARLRSQEDE 133


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