BLASTX nr result

ID: Lithospermum22_contig00003948 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00003948
         (565 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC84833.1| hypothetical protein OsI_31924 [Oryza sativa Indi...   224   7e-57
gb|EEE69996.1| hypothetical protein OsJ_29906 [Oryza sativa Japo...   224   7e-57
ref|NP_001063584.1| Os09g0502000 [Oryza sativa Japonica Group] g...   224   7e-57
pdb|3IZR|HH Chain h, Localization Of The Large Subunit Ribosomal...   223   2e-56
ref|NP_001062288.2| Os08g0524600 [Oryza sativa Japonica Group] g...   223   2e-56

>gb|EEC84833.1| hypothetical protein OsI_31924 [Oryza sativa Indica Group]
          Length = 171

 Score =  224 bits (571), Expect = 7e-57
 Identities = 112/133 (84%), Positives = 115/133 (86%)
 Frame = -3

Query: 563 MAVPLLSXXXXXXXXXXXXRPHHDRYIGLKPSWRRPKGIDSRVRRKFKGCVLMPNIGYGS 384
           MAVPLL+            RPH DRYIGLK SWRRPKGIDSRVRRKFKGC LMPNIGYGS
Sbjct: 39  MAVPLLTKKIVKKRVKQFKRPHSDRYIGLKTSWRRPKGIDSRVRRKFKGCTLMPNIGYGS 98

Query: 383 DKKTRHYLPNGFKKFVVHNVQELEVLMMHNRRYCAEIAHNVSTKKRKDIVERAAQLDIVV 204
           DKKTRHYLPN FKKFVVHNV ELE+LMMHNR YCAEIAHNVSTKKRK+IVERAAQLDIVV
Sbjct: 99  DKKTRHYLPNKFKKFVVHNVSELELLMMHNRMYCAEIAHNVSTKKRKEIVERAAQLDIVV 158

Query: 203 TNKLARLRSQEDE 165
           TNKLARLRSQEDE
Sbjct: 159 TNKLARLRSQEDE 171


>gb|EEE69996.1| hypothetical protein OsJ_29906 [Oryza sativa Japonica Group]
          Length = 170

 Score =  224 bits (571), Expect = 7e-57
 Identities = 112/133 (84%), Positives = 115/133 (86%)
 Frame = -3

Query: 563 MAVPLLSXXXXXXXXXXXXRPHHDRYIGLKPSWRRPKGIDSRVRRKFKGCVLMPNIGYGS 384
           MAVPLL+            RPH DRYIGLK SWRRPKGIDSRVRRKFKGC LMPNIGYGS
Sbjct: 38  MAVPLLTKKIVKKRVKQFKRPHSDRYIGLKTSWRRPKGIDSRVRRKFKGCTLMPNIGYGS 97

Query: 383 DKKTRHYLPNGFKKFVVHNVQELEVLMMHNRRYCAEIAHNVSTKKRKDIVERAAQLDIVV 204
           DKKTRHYLPN FKKFVVHNV ELE+LMMHNR YCAEIAHNVSTKKRK+IVERAAQLDIVV
Sbjct: 98  DKKTRHYLPNKFKKFVVHNVSELELLMMHNRMYCAEIAHNVSTKKRKEIVERAAQLDIVV 157

Query: 203 TNKLARLRSQEDE 165
           TNKLARLRSQEDE
Sbjct: 158 TNKLARLRSQEDE 170


>ref|NP_001063584.1| Os09g0502000 [Oryza sativa Japonica Group]
           gi|113631817|dbj|BAF25498.1| Os09g0502000 [Oryza sativa
           Japonica Group] gi|125564262|gb|EAZ09642.1| hypothetical
           protein OsI_31926 [Oryza sativa Indica Group]
           gi|125606230|gb|EAZ45266.1| hypothetical protein
           OsJ_29908 [Oryza sativa Japonica Group]
           gi|215767820|dbj|BAH00049.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 133

 Score =  224 bits (571), Expect = 7e-57
 Identities = 112/133 (84%), Positives = 115/133 (86%)
 Frame = -3

Query: 563 MAVPLLSXXXXXXXXXXXXRPHHDRYIGLKPSWRRPKGIDSRVRRKFKGCVLMPNIGYGS 384
           MAVPLL+            RPH DRYIGLK SWRRPKGIDSRVRRKFKGC LMPNIGYGS
Sbjct: 1   MAVPLLTKKIVKKRVKQFKRPHSDRYIGLKTSWRRPKGIDSRVRRKFKGCTLMPNIGYGS 60

Query: 383 DKKTRHYLPNGFKKFVVHNVQELEVLMMHNRRYCAEIAHNVSTKKRKDIVERAAQLDIVV 204
           DKKTRHYLPN FKKFVVHNV ELE+LMMHNR YCAEIAHNVSTKKRK+IVERAAQLDIVV
Sbjct: 61  DKKTRHYLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDIVV 120

Query: 203 TNKLARLRSQEDE 165
           TNKLARLRSQEDE
Sbjct: 121 TNKLARLRSQEDE 133


>pdb|3IZR|HH Chain h, Localization Of The Large Subunit Ribosomal Proteins Into
           A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s
           Ribosome gi|76057835|emb|CAH55765.1| ribosomal L32
           [Oryza sativa Indica Group] gi|218202405|gb|EEC84832.1|
           hypothetical protein OsI_31922 [Oryza sativa Indica
           Group]
          Length = 133

 Score =  223 bits (568), Expect = 2e-56
 Identities = 111/133 (83%), Positives = 115/133 (86%)
 Frame = -3

Query: 563 MAVPLLSXXXXXXXXXXXXRPHHDRYIGLKPSWRRPKGIDSRVRRKFKGCVLMPNIGYGS 384
           MAVPLL+            RPH DRYIGLK SWRRPKGIDSRVRRKFKGC LMPNIGYGS
Sbjct: 1   MAVPLLTKKIVKKRVKQFKRPHSDRYIGLKTSWRRPKGIDSRVRRKFKGCTLMPNIGYGS 60

Query: 383 DKKTRHYLPNGFKKFVVHNVQELEVLMMHNRRYCAEIAHNVSTKKRKDIVERAAQLDIVV 204
           DKKTRHYLPN FKKFVVHNV ELE+LMMHNR YCAEIAHNVST+KRK+IVERAAQLDIVV
Sbjct: 61  DKKTRHYLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTRKRKEIVERAAQLDIVV 120

Query: 203 TNKLARLRSQEDE 165
           TNKLARLRSQEDE
Sbjct: 121 TNKLARLRSQEDE 133


>ref|NP_001062288.2| Os08g0524600 [Oryza sativa Japonica Group]
           gi|255678588|dbj|BAF24202.2| Os08g0524600, partial
           [Oryza sativa Japonica Group]
          Length = 151

 Score =  223 bits (568), Expect = 2e-56
 Identities = 111/133 (83%), Positives = 115/133 (86%)
 Frame = -3

Query: 563 MAVPLLSXXXXXXXXXXXXRPHHDRYIGLKPSWRRPKGIDSRVRRKFKGCVLMPNIGYGS 384
           MAVPLL+            RPH DRY+ LKPSWRRPKGIDSRVRRKFKGC LMPNIGYGS
Sbjct: 19  MAVPLLTKKIVKKRVKQFKRPHSDRYLCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGYGS 78

Query: 383 DKKTRHYLPNGFKKFVVHNVQELEVLMMHNRRYCAEIAHNVSTKKRKDIVERAAQLDIVV 204
           DKKTRHYLPN FKKFVVHNV ELE+LMMHNR YCAEIAHNVSTKKRK+IVERAAQLDIVV
Sbjct: 79  DKKTRHYLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDIVV 138

Query: 203 TNKLARLRSQEDE 165
           TNKLARLRSQEDE
Sbjct: 139 TNKLARLRSQEDE 151


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