BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00003943
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_565534.1| uncharacterized protein [Arabidopsis thaliana] ...   205   3e-51
ref|XP_002532875.1| conserved hypothetical protein [Ricinus comm...   201   4e-50
ref|XP_002283731.1| PREDICTED: mediator of RNA polymerase II tra...   200   1e-49
ref|XP_002880440.1| hypothetical protein ARALYDRAFT_320077 [Arab...   197   6e-49
ref|NP_001236730.1| uncharacterized protein LOC100500095 [Glycin...   196   2e-48

>ref|NP_565534.1| uncharacterized protein [Arabidopsis thaliana]
           gi|75206349|sp|Q9SJZ6.1|MED18_ARATH RecName:
           Full=Mediator of RNA polymerase II transcription subunit
           18 gi|4544453|gb|AAD22361.1| expressed protein
           [Arabidopsis thaliana] gi|117168219|gb|ABK32192.1|
           At2g22370 [Arabidopsis thaliana]
           gi|330252204|gb|AEC07298.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 219

 Score =  205 bits (522), Expect = 3e-51
 Identities = 98/107 (91%), Positives = 107/107 (100%)
 Frame = -3

Query: 323 MECVVQGIIETQHVEALEILLQGLCGVQRERLKVHELCLRSGPNLGLVASEVRLLCDLEQ 144
           MECVVQGIIETQHVEALEILLQGLCGVQRERL+VHELCLRSGPNLG+V+SEVRLLCDL+Q
Sbjct: 3   MECVVQGIIETQHVEALEILLQGLCGVQRERLRVHELCLRSGPNLGVVSSEVRLLCDLDQ 62

Query: 143 PEPTWTVRHVGGAMRGAGAEQISVLVRNMVESKVSKNALRLFYSLGY 3
           PEPTWTV+HVGGAMRGAGA+QISVLVRNM+ESKVSKNALR+FY+LGY
Sbjct: 63  PEPTWTVKHVGGAMRGAGADQISVLVRNMIESKVSKNALRMFYALGY 109


>ref|XP_002532875.1| conserved hypothetical protein [Ricinus communis]
           gi|223527360|gb|EEF29504.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 217

 Score =  201 bits (512), Expect = 4e-50
 Identities = 97/107 (90%), Positives = 103/107 (96%)
 Frame = -3

Query: 323 MECVVQGIIETQHVEALEILLQGLCGVQRERLKVHELCLRSGPNLGLVASEVRLLCDLEQ 144
           MECVVQGIIETQHVEALEILLQGLCGV RERL++HELCL+SGPNLG+VASEVRLLCDLEQ
Sbjct: 1   MECVVQGIIETQHVEALEILLQGLCGVHRERLRIHELCLKSGPNLGIVASEVRLLCDLEQ 60

Query: 143 PEPTWTVRHVGGAMRGAGAEQISVLVRNMVESKVSKNALRLFYSLGY 3
           PEPTWTV+HVGGAMRGAGAEQISVLVR MVESK SKN LRLFY+LGY
Sbjct: 61  PEPTWTVKHVGGAMRGAGAEQISVLVRTMVESKASKNVLRLFYALGY 107


>ref|XP_002283731.1| PREDICTED: mediator of RNA polymerase II transcription subunit 18
           [Vitis vinifera] gi|302142417|emb|CBI19620.3| unnamed
           protein product [Vitis vinifera]
          Length = 216

 Score =  200 bits (508), Expect = 1e-49
 Identities = 96/107 (89%), Positives = 103/107 (96%)
 Frame = -3

Query: 323 MECVVQGIIETQHVEALEILLQGLCGVQRERLKVHELCLRSGPNLGLVASEVRLLCDLEQ 144
           MECVVQGIIETQHVEALEILLQGLCGV RERL++HELCL+SGPNLGLVASEVR+LCDLEQ
Sbjct: 1   MECVVQGIIETQHVEALEILLQGLCGVHRERLRIHELCLKSGPNLGLVASEVRVLCDLEQ 60

Query: 143 PEPTWTVRHVGGAMRGAGAEQISVLVRNMVESKVSKNALRLFYSLGY 3
           PEPTW VRH+GGAMRG+GAEQISVLVR MVESKVSKN LRLFY+LGY
Sbjct: 61  PEPTWIVRHIGGAMRGSGAEQISVLVRTMVESKVSKNVLRLFYALGY 107


>ref|XP_002880440.1| hypothetical protein ARALYDRAFT_320077 [Arabidopsis lyrata subsp.
           lyrata] gi|297326279|gb|EFH56699.1| hypothetical protein
           ARALYDRAFT_320077 [Arabidopsis lyrata subsp. lyrata]
          Length = 219

 Score =  197 bits (502), Expect = 6e-49
 Identities = 93/107 (86%), Positives = 105/107 (98%)
 Frame = -3

Query: 323 MECVVQGIIETQHVEALEILLQGLCGVQRERLKVHELCLRSGPNLGLVASEVRLLCDLEQ 144
           MECVVQGIIETQHVEALEILLQGLCGV+RERL+VHELCL+SGPNLG+V+SEVRLLCDL+Q
Sbjct: 3   MECVVQGIIETQHVEALEILLQGLCGVKRERLRVHELCLKSGPNLGVVSSEVRLLCDLDQ 62

Query: 143 PEPTWTVRHVGGAMRGAGAEQISVLVRNMVESKVSKNALRLFYSLGY 3
           PEPTWTV+HVGG MRGAGA+QISV+VR M+ESKVSKNALR+FY+LGY
Sbjct: 63  PEPTWTVKHVGGPMRGAGADQISVMVRTMIESKVSKNALRMFYALGY 109


>ref|NP_001236730.1| uncharacterized protein LOC100500095 [Glycine max]
           gi|255629097|gb|ACU14893.1| unknown [Glycine max]
          Length = 217

 Score =  196 bits (498), Expect = 2e-48
 Identities = 94/107 (87%), Positives = 104/107 (97%)
 Frame = -3

Query: 323 MECVVQGIIETQHVEALEILLQGLCGVQRERLKVHELCLRSGPNLGLVASEVRLLCDLEQ 144
           MECVVQGIIETQHVEALEILLQGLCGVQRERL++HE+CL+SGP+LG VASEVRLLCDLEQ
Sbjct: 1   MECVVQGIIETQHVEALEILLQGLCGVQRERLRIHEICLKSGPHLGTVASEVRLLCDLEQ 60

Query: 143 PEPTWTVRHVGGAMRGAGAEQISVLVRNMVESKVSKNALRLFYSLGY 3
            EP+WTV+HVGGAMRGAGAEQISVLVR+MVESK SKNALR+FY+LGY
Sbjct: 61  AEPSWTVKHVGGAMRGAGAEQISVLVRSMVESKTSKNALRMFYTLGY 107