BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00003936
         (1773 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267079.1| PREDICTED: CRS2-associated factor 2, chlorop...   489   e-139
ref|XP_003631275.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associa...   472   e-134
ref|XP_002525395.1| conserved hypothetical protein [Ricinus comm...   478   e-132
ref|XP_003530640.1| PREDICTED: CRS2-associated factor 2, chlorop...   457   e-130
ref|XP_002315689.1| predicted protein [Populus trichocarpa] gi|2...   455   e-129

>ref|XP_002267079.1| PREDICTED: CRS2-associated factor 2, chloroplastic [Vitis vinifera]
            gi|297739063|emb|CBI28552.3| unnamed protein product
            [Vitis vinifera]
          Length = 561

 Score =  489 bits (1260), Expect(2) = e-139
 Identities = 257/426 (60%), Positives = 294/426 (69%), Gaps = 3/426 (0%)
 Frame = +1

Query: 271  PHDHLSQTRPQTSSN-SKTHPKTSSNSKTHPKTSKPNPAFKISHHNSRYYKPIKPGDHLT 447
            P+D  + T PQ      K  P   S   + P T  P PAFK  HH S+YYKP+  G   +
Sbjct: 23   PNDSTTSTPPQPPIPIPKYPPPLKSQKSSRPPTKPPTPAFKTVHHRSKYYKPVSDGVIAS 82

Query: 448  PPSLFPDDRSVVIGESGISYKLPGAPFEFSFSYSETPKAKPLALREPAFLPFAPPSMPRP 627
                   DRSVVIGESG+SY LPGAPFEF FSYSETPKAKPLA+REPAFLPFAPP+MPRP
Sbjct: 83   D-----GDRSVVIGESGVSYLLPGAPFEFQFSYSETPKAKPLAIREPAFLPFAPPTMPRP 137

Query: 628  WTGKAPLKKKKSRNIKLFKPLGYLXXXXXXXXXXXXGFEEEGVMKYEMLRGYELGK--VE 801
            WTGKAPLKK K + I LF                      +GV + EM   + LGK  VE
Sbjct: 138  WTGKAPLKKSKKK-IPLFDSFNPPPPGT------------KGVKRVEMPGPFPLGKFPVE 184

Query: 802  VRPREEVLGEPLSKVEIKGLLRKLFSSNKQVNLGRDGLTHNMLELIHSHWRRQPVCKVRC 981
             R REE+LGEPLSK EI+ L++   S N+QVNLGRDGLTHNMLELIHSHW+RQ VCKVRC
Sbjct: 185  GRTREEILGEPLSKAEIRMLVKPYLSHNRQVNLGRDGLTHNMLELIHSHWKRQRVCKVRC 244

Query: 982  LGVPTVDMDNICSCLEXXXXXXXXXXXXXXXXXXDKTGGKIIHXXXXXXXXXXXXNYDYR 1161
             GVPT+DMDN+C  LE                  +KTGGKIIH            NY+YR
Sbjct: 245  KGVPTIDMDNVCHHLE------------------EKTGGKIIHRVGGVVYLFRGRNYNYR 286

Query: 1162 RRPKFPVMLWKPAAPVYPKLIQDAPGGLTKEEANELRMKGKKLLPICKLRKNGIYCTLVR 1341
             RP++PVMLWKPAAPVYPKLIQ+AP GLTK EA+ELRMKGK L+PIC+L KNG+Y +LV+
Sbjct: 287  TRPQYPVMLWKPAAPVYPKLIQEAPEGLTKFEADELRMKGKNLIPICRLVKNGVYISLVK 346

Query: 1342 DVRVAFEGCPLVKIDCRGMHASDYKKLGAKLKELVPCVLLSFDDEQILIWRGNDWKERYK 1521
            DVR AFEG PLVKIDC+GMHASDYKK+GAKLKELVPCVLLSFDDEQIL WRG+ WK  Y+
Sbjct: 347  DVRDAFEGSPLVKIDCKGMHASDYKKIGAKLKELVPCVLLSFDDEQILTWRGHGWKSMYQ 406

Query: 1522 DISLYL 1539
                +L
Sbjct: 407  GAPSFL 412



 Score = 34.3 bits (77), Expect(2) = e-139
 Identities = 17/43 (39%), Positives = 26/43 (60%)
 Frame = +3

Query: 1644 AIGVQSSGDLGALSQDSEAMRVHSSPRMMHLWQRALESGKALM 1772
            A G++ SG   +     +   V +SP+MM LW+ A+ES KAL+
Sbjct: 420  ASGLEGSGIPKSNHHRLDTKAVSASPKMMSLWKSAIESSKALL 462


>ref|XP_003631275.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associated factor 2,
            chloroplastic-like [Vitis vinifera]
          Length = 560

 Score =  472 bits (1214), Expect(2) = e-134
 Identities = 250/426 (58%), Positives = 289/426 (67%), Gaps = 3/426 (0%)
 Frame = +1

Query: 271  PHDHLSQTRPQTSSNSKTHPKTSSNSKT-HPKTSKPNPAFKISHHNSRYYKPIKPGDHLT 447
            P+   + T PQ       +P    + K+  P T    PAFK  HH S+YYKP+  G   +
Sbjct: 23   PNASTTSTPPQPPIPIPKYPPPLKSQKSPRPPTKPSTPAFKTVHHRSKYYKPVSDGVIAS 82

Query: 448  PPSLFPDDRSVVIGESGISYKLPGAPFEFSFSYSETPKAKPLALREPAFLPFAPPSMPRP 627
                   DRSVVIGESG+SY L GAPFEF FSYSETPKAKPLA+REPAFLPFAPP+MPRP
Sbjct: 83   D-----GDRSVVIGESGVSYLLAGAPFEFQFSYSETPKAKPLAIREPAFLPFAPPTMPRP 137

Query: 628  WTGKAPLKKKKSRNIKLFKPLGYLXXXXXXXXXXXXGFEEEGVMKYEMLRGYELGK--VE 801
            WTGKAPLKK K + I LF                      +GV + EM   + LGK  VE
Sbjct: 138  WTGKAPLKKSKKK-IPLFDSFNPPPPGT------------KGVKRVEMPGPFPLGKFPVE 184

Query: 802  VRPREEVLGEPLSKVEIKGLLRKLFSSNKQVNLGRDGLTHNMLELIHSHWRRQPVCKVRC 981
             R REE+LGEPLSK EI+ L++   S N+QVNLGRDGLTHNMLELIHSHW+RQ VCKV C
Sbjct: 185  GRTREEILGEPLSKAEIRMLVKPYLSHNRQVNLGRDGLTHNMLELIHSHWKRQRVCKVWC 244

Query: 982  LGVPTVDMDNICSCLEXXXXXXXXXXXXXXXXXXDKTGGKIIHXXXXXXXXXXXXNYDYR 1161
             GVPT+DMDN+C  LE                  +KTGGKIIH            NY+YR
Sbjct: 245  KGVPTIDMDNVCHHLE------------------EKTGGKIIHRVGGVVYLFRGRNYNYR 286

Query: 1162 RRPKFPVMLWKPAAPVYPKLIQDAPGGLTKEEANELRMKGKKLLPICKLRKNGIYCTLVR 1341
             RP++PVMLWKPAAPVYPKLIQ+AP GLTK EA+ELRMKG  L+PIC+L KNG+Y +LV+
Sbjct: 287  TRPQYPVMLWKPAAPVYPKLIQEAPEGLTKFEADELRMKGXNLIPICRLVKNGVYISLVK 346

Query: 1342 DVRVAFEGCPLVKIDCRGMHASDYKKLGAKLKELVPCVLLSFDDEQILIWRGNDWKERYK 1521
            DVR AFEG PLVKIDC+GMHASDYKK+GAKLKE VPCVLLSFDDEQIL WRG+ WK  Y+
Sbjct: 347  DVRDAFEGSPLVKIDCKGMHASDYKKIGAKLKESVPCVLLSFDDEQILTWRGHGWKSMYQ 406

Query: 1522 DISLYL 1539
                +L
Sbjct: 407  GAPSFL 412



 Score = 34.3 bits (77), Expect(2) = e-134
 Identities = 17/43 (39%), Positives = 26/43 (60%)
 Frame = +3

Query: 1644 AIGVQSSGDLGALSQDSEAMRVHSSPRMMHLWQRALESGKALM 1772
            A G++ SG   +     +   V +SP+MM LW+ A+ES KAL+
Sbjct: 420  ASGLEGSGVPKSNHHRLDTKAVSASPKMMSLWKSAIESSKALL 462


>ref|XP_002525395.1| conserved hypothetical protein [Ricinus communis]
            gi|223535358|gb|EEF37033.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 561

 Score =  478 bits (1231), Expect = e-132
 Identities = 248/423 (58%), Positives = 292/423 (69%), Gaps = 2/423 (0%)
 Frame = +1

Query: 265  NKPHDHLSQTRPQTSSNSKTHPKTSSNSKTHPKTSKPNPAFKISHHNSRYYKPIKPGDHL 444
            N P ++ S   PQ       +P     SK +P+T+  +PAFK+ H  ++YYKPIK    +
Sbjct: 19   NPPQNNHSPP-PQPPIPIPKYPPPLKKSK-NPQTASSSPAFKLPHRRTKYYKPIKQDGVI 76

Query: 445  TPPSLFPDDRSVVIGESGISYKLPGAPFEFSFSYSETPKAKPLALREPAFLPFAPPSMPR 624
            +       DRSVV+GE+G+SYKLPGAPFEF FSYSETPK KPLA+REPAFLPF PP+MPR
Sbjct: 77   SSDG----DRSVVVGENGVSYKLPGAPFEFQFSYSETPKVKPLAIREPAFLPFGPPTMPR 132

Query: 625  PWTGKAPLKKKKSRNIKLFKPLGYLXXXXXXXXXXXXGFEEEGVMKYEMLRGYELGKV-- 798
            PWTGKAPLKK K + I LF                     +EGV  +EM    + GK   
Sbjct: 133  PWTGKAPLKKSKKKKIPLFS-------------NSIPNDAKEGVKYFEMPGDLQFGKFPE 179

Query: 799  EVRPREEVLGEPLSKVEIKGLLRKLFSSNKQVNLGRDGLTHNMLELIHSHWRRQPVCKVR 978
            EV+ R E+LG+PL++ EIK L++ L S N+QVNLGRDGLTHNMLELIHSHWRR PVCKVR
Sbjct: 180  EVKSRREILGKPLTRWEIKQLVKPLLSDNRQVNLGRDGLTHNMLELIHSHWRRSPVCKVR 239

Query: 979  CLGVPTVDMDNICSCLEXXXXXXXXXXXXXXXXXXDKTGGKIIHXXXXXXXXXXXXNYDY 1158
            C G+PTVDM+NIC  LE                  ++TGGKII+            NYDY
Sbjct: 240  CKGIPTVDMNNICRHLE------------------ERTGGKIIYRIGGVVYLFCGRNYDY 281

Query: 1159 RRRPKFPVMLWKPAAPVYPKLIQDAPGGLTKEEANELRMKGKKLLPICKLRKNGIYCTLV 1338
            R R ++PVMLWKPAAPVYPKLIQDAP GLTK EA+E R KGK LLPICKL KNG+Y TLV
Sbjct: 282  RSRVRYPVMLWKPAAPVYPKLIQDAPEGLTKAEADEFREKGKNLLPICKLAKNGVYITLV 341

Query: 1339 RDVRVAFEGCPLVKIDCRGMHASDYKKLGAKLKELVPCVLLSFDDEQILIWRGNDWKERY 1518
            RDVR AFEG PLVKIDC+GM+ SDYKKLGAKLKELVPCVLLSFDDE IL+WRG +WK  Y
Sbjct: 342  RDVRNAFEGSPLVKIDCKGMNPSDYKKLGAKLKELVPCVLLSFDDEHILMWRGQNWKPMY 401

Query: 1519 KDI 1527
             ++
Sbjct: 402  PEV 404


>ref|XP_003530640.1| PREDICTED: CRS2-associated factor 2, chloroplastic-like [Glycine max]
          Length = 593

 Score =  457 bits (1175), Expect(2) = e-130
 Identities = 241/418 (57%), Positives = 287/418 (68%), Gaps = 9/418 (2%)
 Frame = +1

Query: 292  TRPQTSSNSKTHPKTSSNSKTHPKTSKP------NPAFKISHHNSRYYKPI-KPGDHLTP 450
            T P  ++ S T        K  P   KP      NPA K  H  S+Y++P+ + G  +  
Sbjct: 23   TPPPPTTVSATPQPPIPIPKYPPPRKKPQPPPPQNPALK-HHRRSKYHRPVPRDGGIIAS 81

Query: 451  PSLFPDDRSVVIGESGISYKLPGAPFEFSFSYSETPKAKPLALREPAFLPFAPPSMPRPW 630
                  DR+VVIGESG+SY LPGAPFEF FSYSETPKAKP+A+REPAFLPFAPP+MPRPW
Sbjct: 82   DGA---DRAVVIGESGVSYLLPGAPFEFQFSYSETPKAKPIAIREPAFLPFAPPTMPRPW 138

Query: 631  TGKAPLKKKKSRNIKLFKPLGYLXXXXXXXXXXXXGFEEEGVMKYEMLRGYELGK--VEV 804
            TGKAPLK KKS+ + LF                      +GV   EM   + +G+  +E 
Sbjct: 139  TGKAPLKGKKSKKVPLFDSFN------------PPPAGTKGVKLVEMPGPFPMGQFPLEG 186

Query: 805  RPREEVLGEPLSKVEIKGLLRKLFSSNKQVNLGRDGLTHNMLELIHSHWRRQPVCKVRCL 984
            + REE+LGEPL K EI  L++ + S N+QVNLGRDGLTHNMLELIHSHW+R+ VCK+RCL
Sbjct: 187  KSREEILGEPLKKWEIHMLVKPMMSYNRQVNLGRDGLTHNMLELIHSHWKRRRVCKIRCL 246

Query: 985  GVPTVDMDNICSCLEXXXXXXXXXXXXXXXXXXDKTGGKIIHXXXXXXXXXXXXNYDYRR 1164
            GVPTVDMDN+C  +E                  +KTGGKIIH            NY+Y  
Sbjct: 247  GVPTVDMDNVCHHIE------------------EKTGGKIIHRVGGVVYLFRGRNYNYST 288

Query: 1165 RPKFPVMLWKPAAPVYPKLIQDAPGGLTKEEANELRMKGKKLLPICKLRKNGIYCTLVRD 1344
            RP++PVMLWKPAAPVYPKLIQDAPGGLTK+EA+ELRMKGK LLPICKL KNG+Y +LV+D
Sbjct: 289  RPQYPVMLWKPAAPVYPKLIQDAPGGLTKDEADELRMKGKSLLPICKLAKNGVYTSLVKD 348

Query: 1345 VRVAFEGCPLVKIDCRGMHASDYKKLGAKLKELVPCVLLSFDDEQILIWRGNDWKERY 1518
            VR AFEG  LVKI+C+G+  SDYKK+GAKLK+LVPCVLLSFDDEQIL+WRG DWK RY
Sbjct: 349  VRDAFEGSILVKINCKGLDPSDYKKIGAKLKDLVPCVLLSFDDEQILMWRGKDWKSRY 406



 Score = 38.5 bits (88), Expect(2) = e-130
 Identities = 18/59 (30%), Positives = 32/59 (54%)
 Frame = +3

Query: 1596 RYKDISPTLTARSSRKAIGVQSSGDLGALSQDSEAMRVHSSPRMMHLWQRALESGKALM 1772
            RY    P  T   +     +++SG+        +   V++SP+M+ LW+RA++S KAL+
Sbjct: 405  RYPQPLPVFTPSKANIVGNLENSGETDDNQYKHDGNMVNTSPKMLSLWKRAIQSSKALL 463


>ref|XP_002315689.1| predicted protein [Populus trichocarpa] gi|222864729|gb|EEF01860.1|
            predicted protein [Populus trichocarpa]
          Length = 506

 Score =  455 bits (1170), Expect(2) = e-129
 Identities = 234/387 (60%), Positives = 268/387 (69%), Gaps = 4/387 (1%)
 Frame = +1

Query: 376  NPAFKISHHNSRYYKPIKPGDHLTPPSLFPDDRSVVIGESGISYKLPGAPFEFSFSYSET 555
            NPAFKI H  ++YYKP+K G  +        DRSV++G+SG+SY LPGAPFEF FSYSET
Sbjct: 3    NPAFKIPHLRTKYYKPVKDGGGVIASD---GDRSVLVGDSGVSYLLPGAPFEFQFSYSET 59

Query: 556  PKAKPLALREPAFLPFAPPSMPRPWTGKAPLK--KKKSRNIKLFKPLGYLXXXXXXXXXX 729
            PK KPLA+REPAFLPFAPP+MPRPWTGK PLK  KKK      F P              
Sbjct: 60   PKVKPLAIREPAFLPFAPPTMPRPWTGKPPLKTSKKKIPVFDSFNP-------------- 105

Query: 730  XXGFEEEGVMKYEMLRGYELGKV--EVRPREEVLGEPLSKVEIKGLLRKLFSSNKQVNLG 903
                 ++GV   EM   Y  GK   E + REE+LGEPL   EIK L++   S N+QVNLG
Sbjct: 106  -PPAGKKGVKYVEMPGPYPFGKFPEEGKSREEILGEPLKTWEIKLLIKPHLSDNRQVNLG 164

Query: 904  RDGLTHNMLELIHSHWRRQPVCKVRCLGVPTVDMDNICSCLEXXXXXXXXXXXXXXXXXX 1083
             DGLTHNMLEL+HSHW+R+ VCKVRC GVPTVDMDN+C  LE                  
Sbjct: 165  EDGLTHNMLELVHSHWKRRRVCKVRCKGVPTVDMDNVCRHLE------------------ 206

Query: 1084 DKTGGKIIHXXXXXXXXXXXXNYDYRRRPKFPVMLWKPAAPVYPKLIQDAPGGLTKEEAN 1263
            +KTGGKIIH            NY+YR RP++PVMLWKPA PVYPKLIQ+AP GLTK +A+
Sbjct: 207  EKTGGKIIHRVGGVVYLFRGRNYNYRTRPQYPVMLWKPATPVYPKLIQEAPEGLTKAQAD 266

Query: 1264 ELRMKGKKLLPICKLRKNGIYCTLVRDVRVAFEGCPLVKIDCRGMHASDYKKLGAKLKEL 1443
            E R KGK LLPICKL KNG+Y TLVRDVR AFEG PLVK+DC+GM  SDYKKLGAKLK+L
Sbjct: 267  EFRKKGKNLLPICKLAKNGVYITLVRDVRAAFEGSPLVKVDCKGMEPSDYKKLGAKLKDL 326

Query: 1444 VPCVLLSFDDEQILIWRGNDWKERYKD 1524
            VPCVLLSFDDEQIL+WRG DWK  Y +
Sbjct: 327  VPCVLLSFDDEQILMWRGQDWKSMYPE 353



 Score = 36.2 bits (82), Expect(2) = e-129
 Identities = 19/43 (44%), Positives = 26/43 (60%)
 Frame = +3

Query: 1644 AIGVQSSGDLGALSQDSEAMRVHSSPRMMHLWQRALESGKALM 1772
            A G   SG       +S+A  + SSP+MM LW+ ALES KA++
Sbjct: 367  ASGSDDSGKSDDDCDNSDAKILSSSPKMMLLWKHALESNKAIL 409