BLASTX nr result

ID: Lithospermum22_contig00003906 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00003906
         (1220 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282278.1| PREDICTED: eukaryotic translation initiation...   368   1e-99
ref|XP_004145638.1| PREDICTED: eukaryotic translation initiation...   365   1e-98
ref|XP_002878024.1| initiation factor 3g [Arabidopsis lyrata sub...   364   3e-98
ref|XP_002282439.1| PREDICTED: eukaryotic translation initiation...   363   4e-98
ref|XP_004137389.1| PREDICTED: eukaryotic translation initiation...   362   8e-98

>ref|XP_002282278.1| PREDICTED: eukaryotic translation initiation factor 3 subunit G-B
            [Vitis vinifera]
          Length = 296

 Score =  368 bits (945), Expect = 1e-99
 Identities = 193/284 (67%), Positives = 218/284 (76%), Gaps = 5/284 (1%)
 Frame = -1

Query: 1058 KPRWGXXXXXXXXXXXXXLPPKQVVGPDENGIKKIIEYKFNDEGHKVKXXXTIRVRKLAE 879
            K RWG             LPP+QV+GPD+NGIKK+IEYKFND+G+KVK   T R+RKLA+
Sbjct: 15   KLRWGELEEDDGEDLDFLLPPRQVIGPDDNGIKKVIEYKFNDDGNKVKITTTTRIRKLAK 74

Query: 878  ARLSKRAIERRSWGKFGDAATQDAAGDNRTNVSTEEILLERPRPPGSKQEETKASGDPF- 702
            ARLSKRAIERRSW KFGDA  +D  G   T VSTEEILLERPR PGSK EE+K +GD   
Sbjct: 75   ARLSKRAIERRSWAKFGDAVHEDV-GSRLTMVSTEEILLERPRAPGSKAEESKVAGDSLA 133

Query: 701  QVSKAGGVLMVCRTCLRKGDHWTAQCPYKDLAQPN--FMNKPPTPD--ADKPGLGKNTYV 534
            Q+ K G VLMVCRTC +KGDHWT++CPYKDLA P+  F++KP   +  A   G  K TYV
Sbjct: 134  QLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPPSEGFIDKPAASEGTATASGPSKGTYV 193

Query: 533  SPALRDKGPGERTPTEMRRRNDENSVRVSNLSEDTREADLGELFRPFGTVSRTYVAFDQK 354
             P +R     ERT TEMRRRN+ENSVRV+NLSEDTRE DL ELFR FG VSR YVA DQK
Sbjct: 194  PPGMR--AGAERTGTEMRRRNEENSVRVTNLSEDTREPDLHELFRTFGPVSRVYVAVDQK 251

Query: 353  TGMSRGFGFVNFVSREDAERAINKLNGYGYDNLILRVEWAAPRA 222
            TGMSRGFGFVNFV++EDAERAINKLNGYGYDNLILRVEWA PR+
Sbjct: 252  TGMSRGFGFVNFVNKEDAERAINKLNGYGYDNLILRVEWATPRS 295


>ref|XP_004145638.1| PREDICTED: eukaryotic translation initiation factor 3 subunit G-like
            [Cucumis sativus] gi|449530442|ref|XP_004172204.1|
            PREDICTED: eukaryotic translation initiation factor 3
            subunit G-like [Cucumis sativus]
          Length = 288

 Score =  365 bits (937), Expect = 1e-98
 Identities = 191/286 (66%), Positives = 216/286 (75%), Gaps = 4/286 (1%)
 Frame = -1

Query: 1064 AQKPRWGXXXXXXXXXXXXXLPPKQVVGPDENGIKKIIEYKFNDEGHKVKXXXTIRVRKL 885
            A K RWG              PPKQ++GPDENG+KKI+EY+FN++G+KVK   T R RKL
Sbjct: 7    ASKLRWGELEDDDGDLDFLL-PPKQIIGPDENGLKKIVEYQFNEDGNKVKITTTTRTRKL 65

Query: 884  AEARLSKRAIERRSWGKFGDAATQDAAGDNRTNVSTEEILLERPRPPGSKQEETKASGDP 705
            A ARLSK A+ERRSW KFGDA  +D  G   T VSTEEILLERPR PGSK EE K +GDP
Sbjct: 66   AHARLSKHAVERRSWAKFGDAVHEDV-GSRLTMVSTEEILLERPRAPGSKPEEPKVAGDP 124

Query: 704  F-QVSKAGGVLMVCRTCLRKGDHWTAQCPYKDLA-QPNFMNKPPTPD--ADKPGLGKNTY 537
              Q+ K G VLMVCRTC +KGDHWT++CPYKDLA Q + ++KP  P+  A  PG  K  Y
Sbjct: 125  LAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQADGLDKPVAPETTAAAPGATKGAY 184

Query: 536  VSPALRDKGPGERTPTEMRRRNDENSVRVSNLSEDTREADLGELFRPFGTVSRTYVAFDQ 357
            V P +R     ERT T+MRRRNDENSVRV+NLSEDTRE DL ELFRPFG VSR YVA DQ
Sbjct: 185  VPPGMR--AGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQ 242

Query: 356  KTGMSRGFGFVNFVSREDAERAINKLNGYGYDNLILRVEWAAPRAT 219
            K GMSRGFGFVNFV+REDA+R+INKLNGYGYDNLILRVEWA PRAT
Sbjct: 243  KNGMSRGFGFVNFVNREDAQRSINKLNGYGYDNLILRVEWATPRAT 288


>ref|XP_002878024.1| initiation factor 3g [Arabidopsis lyrata subsp. lyrata]
            gi|297323862|gb|EFH54283.1| initiation factor 3g
            [Arabidopsis lyrata subsp. lyrata]
          Length = 294

 Score =  364 bits (934), Expect = 3e-98
 Identities = 183/268 (68%), Positives = 213/268 (79%), Gaps = 7/268 (2%)
 Frame = -1

Query: 1001 PPKQVVGPDENGIKKIIEYKFNDEGHKVKXXXTIRVRKLAEARLSKRAIERRSWGKFGDA 822
            PPKQV+GPDENG+K  +EYKFNDEG+KVK     RVRKLA ARL+KRA+ERR+W KFGDA
Sbjct: 28   PPKQVIGPDENGLKTTMEYKFNDEGNKVKITTRTRVRKLASARLNKRAMERRNWPKFGDA 87

Query: 821  ATQDAAGDNRTNVSTEEILLERPRPPGSKQEETKASGDPF-QVSKAGGVLMVCRTCLRKG 645
            A ++A G + T VSTEEILLERPRPPG+K +E+KA+GD   Q+ K G VLMVCR C +KG
Sbjct: 88   ANEEA-GSHLTMVSTEEILLERPRPPGTKADESKATGDGLSQLGKGGAVLMVCRICHKKG 146

Query: 644  DHWTAQCPYKDLAQPN--FMNKPPTPDADK----PGLGKNTYVSPALRDKGPGERTPTEM 483
            DHWT++CPYKDLA P   F++KPPT ++      PG GK  YV P++R         ++M
Sbjct: 147  DHWTSKCPYKDLAAPTDAFIDKPPTGESSTMSAAPGTGKAAYVPPSMRAGADRSAVGSDM 206

Query: 482  RRRNDENSVRVSNLSEDTREADLGELFRPFGTVSRTYVAFDQKTGMSRGFGFVNFVSRED 303
            RRRNDENSVRV+NLSEDTRE DL ELF PFG V+R YVA DQKTG+SRGFGFVNFVSRED
Sbjct: 207  RRRNDENSVRVTNLSEDTREPDLMELFHPFGAVTRVYVAIDQKTGVSRGFGFVNFVSRED 266

Query: 302  AERAINKLNGYGYDNLILRVEWAAPRAT 219
            A+RAINKLNGYGYDNLILRVEWA PR T
Sbjct: 267  AQRAINKLNGYGYDNLILRVEWATPRPT 294


>ref|XP_002282439.1| PREDICTED: eukaryotic translation initiation factor 3 subunit G-B
            [Vitis vinifera]
          Length = 301

 Score =  363 bits (933), Expect = 4e-98
 Identities = 191/287 (66%), Positives = 219/287 (76%), Gaps = 6/287 (2%)
 Frame = -1

Query: 1067 QAQKPRWGXXXXXXXXXXXXXLPPKQVVGPDENGIKKIIEYKFNDEGHKVKXXXTIRVRK 888
            +A+K RWG             LPP+QV+GP+ENGIKK+IEYKFN++G+KVK   T RVRK
Sbjct: 17   KAEKIRWGELDEDDGEDLDFLLPPRQVIGPEENGIKKVIEYKFNEDGNKVKITTTTRVRK 76

Query: 887  LAEARLSKRAIERRSWGKFGDAATQDAAGDNRTNVSTEEILLERPRPPGSKQEETKASGD 708
            LA+ARLSKRA+ERRSW KFGDA  +D  G   T VSTEEILLERPR PG+K EETK +GD
Sbjct: 77   LAKARLSKRAVERRSWAKFGDAVHEDV-GSRLTMVSTEEILLERPRAPGTKAEETKIAGD 135

Query: 707  PF-QVSKAGGVLMVCRTCLRKGDHWTAQCPYKDLAQPN--FMNKPPTPDAD--KPGLGKN 543
               Q+ K G VLMVCRTC +KGDHWT++CPYKDLA     F++KPP  +      G GK 
Sbjct: 136  SLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAAQTDAFVDKPPAAETTVATTGTGKA 195

Query: 542  TYVSPALRDKGPG-ERTPTEMRRRNDENSVRVSNLSEDTREADLGELFRPFGTVSRTYVA 366
             YV P +R   PG ER  ++MRRRN+ENSVRV+NLSEDTRE DL ELFR FG VSR YVA
Sbjct: 196  AYVPPGMR---PGAERVGSDMRRRNEENSVRVTNLSEDTREPDLHELFRTFGPVSRVYVA 252

Query: 365  FDQKTGMSRGFGFVNFVSREDAERAINKLNGYGYDNLILRVEWAAPR 225
             DQKTGMSRGFGFVNFV++EDAERAINKLNGYGYDNLILRVEWA PR
Sbjct: 253  IDQKTGMSRGFGFVNFVNKEDAERAINKLNGYGYDNLILRVEWATPR 299


>ref|XP_004137389.1| PREDICTED: eukaryotic translation initiation factor 3 subunit G-like
            [Cucumis sativus] gi|449507153|ref|XP_004162947.1|
            PREDICTED: eukaryotic translation initiation factor 3
            subunit G-like [Cucumis sativus]
          Length = 289

 Score =  362 bits (930), Expect = 8e-98
 Identities = 191/292 (65%), Positives = 217/292 (74%), Gaps = 5/292 (1%)
 Frame = -1

Query: 1079 SMAAQAQKPRWGXXXXXXXXXXXXXLPPKQVVGPDENGIKKIIEYKFNDEGHKVKXXXTI 900
            + AA   K RWG              PPK+++GPDENG+KK+IEY+FN++G+KVK   T 
Sbjct: 2    AQAASRSKLRWGELDDDDGDLDFLL-PPKKIIGPDENGVKKVIEYQFNEDGNKVKITTTT 60

Query: 899  RVRKLAEARLSKRAIERRSWGKFGDAATQDAAGDNRTNVSTEEILLERPRPPGSKQEETK 720
            R RKLA ARLSK A+ERRSW KFGDA  +D  G   T VSTEEILLERPR PGSK EE K
Sbjct: 61   RTRKLANARLSKHAVERRSWAKFGDAVHEDV-GSRLTMVSTEEILLERPRAPGSKPEEPK 119

Query: 719  ASGDPF-QVSKAGGVLMVCRTCLRKGDHWTAQCPYKDLA-QPNFMNKPPTPDADKPGLG- 549
             +GDP  Q+ K G VLMVCRTC +KGDHWT++CPYKDLA Q   ++K   P+A     G 
Sbjct: 120  VAGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQGEGLDKATAPEAAAAAPGG 179

Query: 548  --KNTYVSPALRDKGPGERTPTEMRRRNDENSVRVSNLSEDTREADLGELFRPFGTVSRT 375
              K TYV P +R     +RT T+MRRRNDENSVRV+NLSEDTRE DL ELFRPFG VSR 
Sbjct: 180  ATKGTYVPPGMR--AGADRTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRV 237

Query: 374  YVAFDQKTGMSRGFGFVNFVSREDAERAINKLNGYGYDNLILRVEWAAPRAT 219
            YVA DQKTGMSRGFGFVNFV+REDA+RAINKLNGYGYDNLILRVEWA PRAT
Sbjct: 238  YVAVDQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPRAT 289


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