BLASTX nr result

ID: Lithospermum22_contig00003899 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00003899
         (1226 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270610.1| PREDICTED: probable serine incorporator [Vit...   355   e-134
ref|XP_002890152.1| TMS membrane family protein [Arabidopsis lyr...   351   e-134
ref|NP_173069.1| serinc-domain containing protein [Arabidopsis t...   349   e-134
ref|XP_003532291.1| PREDICTED: probable serine incorporator-like...   344   e-132
ref|XP_002304839.1| predicted protein [Populus trichocarpa] gi|2...   343   e-131

>ref|XP_002270610.1| PREDICTED: probable serine incorporator [Vitis vinifera]
            gi|298204750|emb|CBI25248.3| unnamed protein product
            [Vitis vinifera]
          Length = 413

 Score =  355 bits (910), Expect(2) = e-134
 Identities = 161/204 (78%), Positives = 178/204 (87%)
 Frame = -3

Query: 1224 FETDAVLRVSLGNFLFFTILSVMMVGVKNQKDPRDSMHHGGWMMKVICWCLLVIFTFFLP 1045
            FETDAVLRVS GNFLFFTIL+++M+GVKNQKDPRD MHHGGWMMK+ICWC+LVIFTFFLP
Sbjct: 75   FETDAVLRVSFGNFLFFTILAILMIGVKNQKDPRDGMHHGGWMMKIICWCILVIFTFFLP 134

Query: 1044 NEMISFYETTSKFGAGXXXXXXXXXXXXXVHRWNDTWVGYDERFWYMALLVVSLVCYIAT 865
            NE+ISFYETTSKFG+G             VHRWNDTWVGY E+FWY+AL VVSLVCY+AT
Sbjct: 135  NELISFYETTSKFGSGLFLLVQVVLLLDFVHRWNDTWVGYGEQFWYIALFVVSLVCYVAT 194

Query: 864  FAFSGVLFHFFAPSGQDCGTNTFFIVMTLIFVVVFAIVTLHPAVSGSILPSSVISVYCMY 685
            F+FSG+LFHFF PSG DCG NTFFIVMTLI   VFAIV LHPAV GSILP+SV+S+YCMY
Sbjct: 195  FSFSGLLFHFFTPSGHDCGLNTFFIVMTLILAFVFAIVALHPAVGGSILPASVVSLYCMY 254

Query: 684  LCYSGLASEPRDYECNGLHKHSNA 613
            LCYSGL+SEPRDYECNGLHKHS A
Sbjct: 255  LCYSGLSSEPRDYECNGLHKHSKA 278



 Score =  152 bits (384), Expect(2) = e-134
 Identities = 80/140 (57%), Positives = 94/140 (67%)
 Frame = -2

Query: 607 HKYTLCWASNCVGLLTTVLSVVYSAVXXXXXXXXXXXXXXXXXXXXGKPLLPLDKADDQE 428
           H   +   +  +GLLTT+LSV+YSAV                     KPLLPL+K D  E
Sbjct: 275 HSKAVSTGTLTLGLLTTILSVIYSAVRAGSSTTLLSPPSSPRAGAG-KPLLPLEKTDVPE 333

Query: 427 EEEKSKPVXXXXXXXXXXXSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRIITGWA 248
           E+ ++KPV           SLASMYSAMLLTGWSTSVGESG+LVDVGWPSVWVRI+TGWA
Sbjct: 334 EKHEAKPVTYSYTFFHIIFSLASMYSAMLLTGWSTSVGESGRLVDVGWPSVWVRIVTGWA 393

Query: 247 TALLFLWSLVAPILFPDREF 188
           TA L++WSL APILFP+REF
Sbjct: 394 TAALYIWSLAAPILFPEREF 413


>ref|XP_002890152.1| TMS membrane family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297335994|gb|EFH66411.1| TMS membrane family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 412

 Score =  351 bits (900), Expect(2) = e-134
 Identities = 162/204 (79%), Positives = 177/204 (86%)
 Frame = -3

Query: 1224 FETDAVLRVSLGNFLFFTILSVMMVGVKNQKDPRDSMHHGGWMMKVICWCLLVIFTFFLP 1045
            FETDAVLRVSLGNFLFF+ILSVMM+GVKNQKDPRD +HHGGWMMK+ICWC+LVI  FFLP
Sbjct: 75   FETDAVLRVSLGNFLFFSILSVMMIGVKNQKDPRDGIHHGGWMMKIICWCILVILMFFLP 134

Query: 1044 NEMISFYETTSKFGAGXXXXXXXXXXXXXVHRWNDTWVGYDERFWYMALLVVSLVCYIAT 865
            NE+ISFYE+ SKFGAG             VH WNDTWVGYDE+FWY ALLVVSLVCY+AT
Sbjct: 135  NEIISFYESMSKFGAGFFLLVQVVLLLDFVHGWNDTWVGYDEQFWYAALLVVSLVCYLAT 194

Query: 864  FAFSGVLFHFFAPSGQDCGTNTFFIVMTLIFVVVFAIVTLHPAVSGSILPSSVISVYCMY 685
            F FSG+LFH+F PSG DCG NTFFI+MTLIFV VFA+V LHPAV GSILP+SVIS+YCMY
Sbjct: 195  FVFSGLLFHWFTPSGHDCGLNTFFIIMTLIFVFVFAVVVLHPAVGGSILPASVISLYCMY 254

Query: 684  LCYSGLASEPRDYECNGLHKHSNA 613
            LCYSGLASEPRDYECNGLHKHS A
Sbjct: 255  LCYSGLASEPRDYECNGLHKHSKA 278



 Score =  155 bits (393), Expect(2) = e-134
 Identities = 85/141 (60%), Positives = 96/141 (68%), Gaps = 1/141 (0%)
 Frame = -2

Query: 607 HKYTLCWASNCVGLLTTVLSVVYSAVXXXXXXXXXXXXXXXXXXXXGKPLLPLD-KADDQ 431
           H   +   +  +GLLTTVLSVVYSAV                     KPLLP+D KA+++
Sbjct: 275 HSKAVSTGTMTIGLLTTVLSVVYSAVRAGSSTTLLSPPDSPRAE---KPLLPIDGKAEEK 331

Query: 430 EEEEKSKPVXXXXXXXXXXXSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRIITGW 251
           EE+E  KPV           SLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVR++T W
Sbjct: 332 EEKENKKPVSYSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRVVTSW 391

Query: 250 ATALLFLWSLVAPILFPDREF 188
           ATA LF+WSLVAPILFPDREF
Sbjct: 392 ATAGLFIWSLVAPILFPDREF 412


>ref|NP_173069.1| serinc-domain containing protein [Arabidopsis thaliana]
            gi|334182610|ref|NP_001185008.1| serinc-domain containing
            protein [Arabidopsis thaliana]
            gi|6587821|gb|AAF18512.1|AC010924_25 Contains similarity
            to gb|AF181686 membrane protein TMS1d from Drosophila
            melanogaster. ESTs gb|R64994, gb|AI994832, gb|Z47674 come
            from this gene [Arabidopsis thaliana]
            gi|332191295|gb|AEE29416.1| serinc-domain containing
            protein [Arabidopsis thaliana]
            gi|332191296|gb|AEE29417.1| serinc-domain containing
            protein [Arabidopsis thaliana]
          Length = 412

 Score =  349 bits (896), Expect(2) = e-134
 Identities = 162/204 (79%), Positives = 175/204 (85%)
 Frame = -3

Query: 1224 FETDAVLRVSLGNFLFFTILSVMMVGVKNQKDPRDSMHHGGWMMKVICWCLLVIFTFFLP 1045
            FETDAVLRVSLGNFLFF+ILSVMM+GVKNQKDPRD +HHGGWMMK+ICWC+LVIF FFLP
Sbjct: 75   FETDAVLRVSLGNFLFFSILSVMMIGVKNQKDPRDGIHHGGWMMKIICWCILVIFMFFLP 134

Query: 1044 NEMISFYETTSKFGAGXXXXXXXXXXXXXVHRWNDTWVGYDERFWYMALLVVSLVCYIAT 865
            NE+ISFYE+ SKFGAG             VH WNDTWVGYDE+FWY ALLVVSLVCY+AT
Sbjct: 135  NEIISFYESMSKFGAGFFLLVQVVLLLDFVHGWNDTWVGYDEQFWYAALLVVSLVCYLAT 194

Query: 864  FAFSGVLFHFFAPSGQDCGTNTFFIVMTLIFVVVFAIVTLHPAVSGSILPSSVISVYCMY 685
            F FSG LFH+F PSG DCG NTFFI+MTLIFV VFAIV LHP V GSILP+SVIS+YCMY
Sbjct: 195  FVFSGFLFHWFTPSGHDCGLNTFFIIMTLIFVFVFAIVVLHPTVGGSILPASVISLYCMY 254

Query: 684  LCYSGLASEPRDYECNGLHKHSNA 613
            LCYSGLASEPRDYECNGLH HS A
Sbjct: 255  LCYSGLASEPRDYECNGLHNHSKA 278



 Score =  155 bits (393), Expect(2) = e-134
 Identities = 85/141 (60%), Positives = 96/141 (68%), Gaps = 1/141 (0%)
 Frame = -2

Query: 607 HKYTLCWASNCVGLLTTVLSVVYSAVXXXXXXXXXXXXXXXXXXXXGKPLLPLD-KADDQ 431
           H   +   +  +GLLTTVLSVVYSAV                     KPLLP+D KA+++
Sbjct: 275 HSKAVSTGTMTIGLLTTVLSVVYSAVRAGSSTTLLSPPDSPRAE---KPLLPIDGKAEEK 331

Query: 430 EEEEKSKPVXXXXXXXXXXXSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRIITGW 251
           EE+E  KPV           SLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVR++T W
Sbjct: 332 EEKENKKPVSYSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRVVTSW 391

Query: 250 ATALLFLWSLVAPILFPDREF 188
           ATA LF+WSLVAPILFPDREF
Sbjct: 392 ATAGLFIWSLVAPILFPDREF 412


>ref|XP_003532291.1| PREDICTED: probable serine incorporator-like [Glycine max]
          Length = 410

 Score =  344 bits (883), Expect(2) = e-132
 Identities = 159/204 (77%), Positives = 174/204 (85%)
 Frame = -3

Query: 1224 FETDAVLRVSLGNFLFFTILSVMMVGVKNQKDPRDSMHHGGWMMKVICWCLLVIFTFFLP 1045
            FETDAVLRVSLGNFLFFTIL+V+MVGVK Q+DPRDSMHHGGWMMK+ICWCLLVIF FF+P
Sbjct: 75   FETDAVLRVSLGNFLFFTILAVLMVGVKTQRDPRDSMHHGGWMMKIICWCLLVIFMFFVP 134

Query: 1044 NEMISFYETTSKFGAGXXXXXXXXXXXXXVHRWNDTWVGYDERFWYMALLVVSLVCYIAT 865
            NE+ISFYET SKFG+G             VH WND WVGYDE+FWY+AL VVSLVCY+AT
Sbjct: 135  NEIISFYETISKFGSGMFLLVQVMLLLDFVHGWNDKWVGYDEQFWYIALFVVSLVCYVAT 194

Query: 864  FAFSGVLFHFFAPSGQDCGTNTFFIVMTLIFVVVFAIVTLHPAVSGSILPSSVISVYCMY 685
            FAFSGVLFHFF PSGQDCG N FFI MT+I   VFAIV LHPAV+GS+LP+SVIS+YC Y
Sbjct: 195  FAFSGVLFHFFTPSGQDCGLNVFFITMTMILAFVFAIVALHPAVNGSVLPASVISLYCTY 254

Query: 684  LCYSGLASEPRDYECNGLHKHSNA 613
            LCYS LASEPRDYECNGLHKHS A
Sbjct: 255  LCYSALASEPRDYECNGLHKHSKA 278



 Score =  154 bits (388), Expect(2) = e-132
 Identities = 86/140 (61%), Positives = 95/140 (67%)
 Frame = -2

Query: 607 HKYTLCWASNCVGLLTTVLSVVYSAVXXXXXXXXXXXXXXXXXXXXGKPLLPLDKADDQE 428
           H   +   +  +GL TTVLSVVYSAV                     KPLLPLD  +D E
Sbjct: 275 HSKAVSTGTLTLGLATTVLSVVYSAVRAGSSAAVLSPPSSPRAG---KPLLPLDAKED-E 330

Query: 427 EEEKSKPVXXXXXXXXXXXSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRIITGWA 248
           E+EK+KPV           SLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRIIT WA
Sbjct: 331 EKEKAKPVTYSYAFFHLIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRIITSWA 390

Query: 247 TALLFLWSLVAPILFPDREF 188
           TALL+LWSLVAPI+FP+REF
Sbjct: 391 TALLYLWSLVAPIMFPEREF 410


>ref|XP_002304839.1| predicted protein [Populus trichocarpa] gi|222842271|gb|EEE79818.1|
            predicted protein [Populus trichocarpa]
          Length = 415

 Score =  343 bits (881), Expect(2) = e-131
 Identities = 156/204 (76%), Positives = 176/204 (86%)
 Frame = -3

Query: 1224 FETDAVLRVSLGNFLFFTILSVMMVGVKNQKDPRDSMHHGGWMMKVICWCLLVIFTFFLP 1045
            FETDAVLRVSLGNF+FFTIL+ MMVGVKNQKDPRDS+HHGGWM KV+CWC+LVI  FFLP
Sbjct: 75   FETDAVLRVSLGNFMFFTILATMMVGVKNQKDPRDSLHHGGWMAKVVCWCILVILMFFLP 134

Query: 1044 NEMISFYETTSKFGAGXXXXXXXXXXXXXVHRWNDTWVGYDERFWYMALLVVSLVCYIAT 865
            NE++SFYE+ SKFG+G             VH WND WVGYDE+FWY+AL VVSLVCY+ T
Sbjct: 135  NEIVSFYESISKFGSGLFLLVQVVLLLDFVHGWNDKWVGYDEKFWYVALFVVSLVCYVGT 194

Query: 864  FAFSGVLFHFFAPSGQDCGTNTFFIVMTLIFVVVFAIVTLHPAVSGSILPSSVISVYCMY 685
            FAFSG+LFH+F PSGQDCG NTFFIVMTLIF  VFAIV LHPAV+GS+LP+SVIS+YCMY
Sbjct: 195  FAFSGLLFHWFTPSGQDCGLNTFFIVMTLIFAFVFAIVALHPAVNGSVLPASVISLYCMY 254

Query: 684  LCYSGLASEPRDYECNGLHKHSNA 613
            LCYSGLASEPR+YECNGLH+HS A
Sbjct: 255  LCYSGLASEPREYECNGLHRHSKA 278



 Score =  153 bits (386), Expect(2) = e-131
 Identities = 87/142 (61%), Positives = 98/142 (69%), Gaps = 2/142 (1%)
 Frame = -2

Query: 607 HKYTLCWASNCVGLLTTVLSVVYSAVXXXXXXXXXXXXXXXXXXXXGKPLLPLD-KADDQ 431
           H   +   +  +GLLTTVLSVVYSAV                     KPLLPLD KA++Q
Sbjct: 275 HSKAVSTGTLSIGLLTTVLSVVYSAVRAGSSTALLSPPSSPRAGAD-KPLLPLDNKANEQ 333

Query: 430 EEEEKS-KPVXXXXXXXXXXXSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRIITG 254
           EE+EK+ KPV           SLASMYSAMLLTGWSTS+GESGKLVDVGWPSVWVRI+TG
Sbjct: 334 EEKEKACKPVTYSYSFFHIIFSLASMYSAMLLTGWSTSIGESGKLVDVGWPSVWVRILTG 393

Query: 253 WATALLFLWSLVAPILFPDREF 188
           WATA L+ WSLVAPILFP+REF
Sbjct: 394 WATAGLYTWSLVAPILFPEREF 415


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