BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00003875
         (1329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266563.1| PREDICTED: pentatricopeptide repeat-containi...   509   e-142
ref|XP_003548528.1| PREDICTED: pentatricopeptide repeat-containi...   477   e-132
ref|XP_002515001.1| pentatricopeptide repeat-containing protein,...   473   e-131
ref|XP_004159705.1| PREDICTED: pentatricopeptide repeat-containi...   469   e-130
ref|XP_004135302.1| PREDICTED: pentatricopeptide repeat-containi...   469   e-130

>ref|XP_002266563.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
            mitochondrial [Vitis vinifera]
          Length = 496

 Score =  509 bits (1312), Expect = e-142
 Identities = 237/356 (66%), Positives = 288/356 (80%)
 Frame = +3

Query: 6    AMVQEMHADNLVSKNTIAKVMRRFCGAGEWKEAIRIFDELENYGLEKNTETMNILLNSLC 185
            A+++EM   NLV  +T+AK MRR  GAGEW++A+R+FD+L N+ LEKNTE+MN+LL++LC
Sbjct: 133  ALMEEMRQGNLVRLSTVAKAMRRLAGAGEWEDAVRVFDDLGNFELEKNTESMNLLLDTLC 192

Query: 186  KEKRVEQARDVFLELKSHIQPNANTFNIFIYGWCKIYRIEEAYWTIQEMKGYGFRPCVIS 365
            KE++VEQAR +FLELK HI PN +TFNIFI+GWCK  R++EA WTIQEMKG+G RPCVIS
Sbjct: 193  KERKVEQARAIFLELKPHISPNTHTFNIFIHGWCKANRVDEAEWTIQEMKGHGCRPCVIS 252

Query: 366  YTTIIQSYCEQFDFPKVYELLDEMQAQECAPNVVTFTSIMCSLTNSQMYEEALQIYERME 545
            Y+TIIQSYC Q +F KVYELLD+MQAQ CAPNVVT+T+IMCSLT  + +EEALQI ERM 
Sbjct: 253  YSTIIQSYCRQSNFRKVYELLDDMQAQGCAPNVVTYTTIMCSLTKVEQFEEALQIAERMR 312

Query: 546  SIGCKPDTLFFNAYIHTLGRAGQAHRAIRVFKFVMPVNGATPNTSTYNSMIAMFCHQEQE 725
            S+GCKPDTLF+NA IHTLGRAGQ   A+RVF+  MP  G  PNTSTYNSMIAMFCH  QE
Sbjct: 313  SVGCKPDTLFYNALIHTLGRAGQLREAVRVFEVEMPKTGVPPNTSTYNSMIAMFCHHSQE 372

Query: 726  EKALEYLRHMENSPYCKPDVQSYSPLFKLYLRAGKFEACRQMLDDMVNKHHLSLDLATYA 905
            +KAL  LR +ENS +CKPD+Q+Y P+ K   + GK ++    LDDMVNKHHLSLD++ Y 
Sbjct: 373  QKALNLLREIENSTFCKPDIQTYYPVLKSCFKTGKIDSLSNFLDDMVNKHHLSLDVSAYT 432

Query: 906  LLIHGLCRGKKCEVAYLLFQAMIGKGITPRYQTCRLLLEEMKSKNMFDAAETIEEY 1073
            LLIHGLCR  KCE  Y LF+ M+GK ITPRY+TC LLL+E+K KNM DAAE IE +
Sbjct: 433  LLIHGLCRANKCEWGYNLFEEMVGKAITPRYKTCALLLDEIKQKNMHDAAERIEVF 488


>ref|XP_003548528.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
            mitochondrial-like [Glycine max]
          Length = 490

 Score =  477 bits (1228), Expect = e-132
 Identities = 224/355 (63%), Positives = 287/355 (80%), Gaps = 1/355 (0%)
 Frame = +3

Query: 9    MVQEMHADNLVSKNTIAKVMRRFCGAGEWKEAIRIFDELENYGLEKNTETMNILLNSLCK 188
            +++EM    LV+ NT+AK MRRF GAG+W +A+RIFD+L+  GLEKNTE+MN+LL++LCK
Sbjct: 131  LLEEMREGGLVNMNTVAKAMRRFVGAGQWVDAVRIFDDLQALGLEKNTESMNLLLDTLCK 190

Query: 189  EKRVEQARDVFLELKSHIQPNANTFNIFIYGWCKIYRIEEAYWTIQEMKGYGFRPCVISY 368
            EK V+QAR++FLELK HI PNA+TFNIFI+GWCKI R++EA+WTIQEMKGYGF PCVISY
Sbjct: 191  EKFVQQAREIFLELKQHIAPNAHTFNIFIHGWCKICRVDEAHWTIQEMKGYGFHPCVISY 250

Query: 369  TTIIQSYCEQFDFPKVYELLDEMQAQECAPNVVTFTSIMCSLTNSQMYEEALQIYERMES 548
            +T+IQ YC++ +F +VYELLDEMQAQ C+ NV+T+TSIMC+L  ++ +EEAL++ ERM S
Sbjct: 251  STLIQCYCQEGNFSRVYELLDEMQAQGCSANVITYTSIMCALGKAKKFEEALKVPERMRS 310

Query: 549  IGCKPDTLFFNAYIHTLGRAGQAHRAIRVFKFVMPVNGATPNTSTYNSMIAMFCHQEQEE 728
             GC+PDTLFFN+ IHTLGRAG+   A  VFK  MP  G +PNTSTYNSMI+MFC+  QE+
Sbjct: 311  SGCRPDTLFFNSLIHTLGRAGRLDDAADVFKVEMPKAGVSPNTSTYNSMISMFCYHAQEK 370

Query: 729  KALEYLRHMENSPYCKPDVQSYSPLFKLYLRAGKFE-ACRQMLDDMVNKHHLSLDLATYA 905
            +ALE L+ MENS  CKPD Q+Y PL K   R+GK +    ++L+DM+NK HLSLDL+TY 
Sbjct: 371  RALEILKEMENSGGCKPDAQTYHPLIKSCFRSGKIDGVLSEILNDMINKQHLSLDLSTYT 430

Query: 906  LLIHGLCRGKKCEVAYLLFQAMIGKGITPRYQTCRLLLEEMKSKNMFDAAETIEE 1070
            LLIHGLCR  +C  A+ LF+ MI + I PRY+TCRLLL+E+K KNM+ AAE IE+
Sbjct: 431  LLIHGLCREDRCNWAFSLFEEMIDQDIIPRYRTCRLLLDEVKQKNMYQAAEKIED 485


>ref|XP_002515001.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223546052|gb|EEF47555.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 466

 Score =  473 bits (1218), Expect = e-131
 Identities = 221/354 (62%), Positives = 280/354 (79%), Gaps = 1/354 (0%)
 Frame = +3

Query: 9    MVQEMHADNLVSKNTIAKVMRRFCGAGEWKEAIRIFDELENYGLEKNTETMNILLNSLCK 188
            +++EM     V+  T+ K MRRF GA +W+  +R+FD+L  +GLEKNTE+MN+LL++LCK
Sbjct: 107  LLEEMEKGQHVTLKTVGKAMRRFAGARQWENVLRVFDKLGTFGLEKNTESMNLLLDTLCK 166

Query: 189  EKRVEQARDVFLELKSHIQPNANTFNIFIYGWCKIYRIEEAYWTIQEMKGYGFRPCVISY 368
            E++VE AR++FL+LKSHI PNANTFNIFI+GWCK+ R+EEAYWTIQEMKG+G  PCVISY
Sbjct: 167  ERKVELAREIFLDLKSHISPNANTFNIFIHGWCKVNRVEEAYWTIQEMKGHGCTPCVISY 226

Query: 369  TTIIQSYCEQFDFPKVYELLDEMQAQECAPNVVTFTSIMCSLTNSQMYEEALQIYERMES 548
            +TI+Q YC + +F KVYELLDEM+AQ   PNVVT+TS+M +L  S+ YEEALQI +RM+S
Sbjct: 227  STIVQFYCHRSNFSKVYELLDEMEAQGLIPNVVTYTSVMSALAKSEEYEEALQIAQRMKS 286

Query: 549  IGCKPDTLFFNAYIHTLGRAGQAHRAIRVFKFVMPVNGATPNTSTYNSMIAMFCHQEQEE 728
            +GCKPDTLF+N+ IHTLG+AG+   AI+VF+  MP  G  PNTSTYNSMIAM CH  QE 
Sbjct: 287  VGCKPDTLFYNSLIHTLGKAGRPEEAIQVFEVEMPNTGVPPNTSTYNSMIAMLCHHSQER 346

Query: 729  KALEYLRHMENSPYCKPDVQSYSPLFKLYLRAGKFEA-CRQMLDDMVNKHHLSLDLATYA 905
            KAL  L+ +E S  CKPDVQ+Y PL K   +AG  ++   Q+LDDMV KHHLSLD + Y 
Sbjct: 347  KALNLLKEIEASIICKPDVQTYYPLLKSCFKAGSIDSLLSQLLDDMVKKHHLSLDFSAYT 406

Query: 906  LLIHGLCRGKKCEVAYLLFQAMIGKGITPRYQTCRLLLEEMKSKNMFDAAETIE 1067
            LL+HGLCR  KCE AY LF+ MIGK +TP+YQTCRLLL+E+K K+M+DAA+ IE
Sbjct: 407  LLVHGLCRANKCEWAYCLFEEMIGKDMTPKYQTCRLLLDEVKLKHMYDAAQKIE 460


>ref|XP_004159705.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
            mitochondrial-like [Cucumis sativus]
          Length = 488

 Score =  469 bits (1207), Expect = e-130
 Identities = 221/354 (62%), Positives = 280/354 (79%), Gaps = 1/354 (0%)
 Frame = +3

Query: 9    MVQEMHADNLVSKNTIAKVMRRFCGAGEWKEAIRIFDELENYGLEKNTETMNILLNSLCK 188
            M++EM    LV+ +T+AK MRRF GAG+W+ A+RIFD+LE YGLEKNTE+MN+LL++LCK
Sbjct: 129  MLEEMKEARLVTLDTVAKAMRRFAGAGQWENAVRIFDDLETYGLEKNTESMNVLLDTLCK 188

Query: 189  EKRVEQARDVFLELKSHIQPNANTFNIFIYGWCKIYRIEEAYWTIQEMKGYGFRPCVISY 368
            EK+VE+AR ++LELKSHI PNANTFN+FI+GWCK+ +I+EA+WT++EMKGYG RPCVISY
Sbjct: 189  EKKVEKARQMYLELKSHIAPNANTFNMFIHGWCKVNKIDEAHWTLEEMKGYGHRPCVISY 248

Query: 369  TTIIQSYCEQFDFPKVYELLDEMQAQECAPNVVTFTSIMCSLTNSQMYEEALQIYERMES 548
            +TII  YC + +F KVYELLDEM AQ C  NV+T+T+IMCSLT S+ +EEALQI ERM+S
Sbjct: 249  STIILFYCHRCNFNKVYELLDEMDAQGCPANVITYTTIMCSLTKSEEFEEALQIAERMKS 308

Query: 549  IGCKPDTLFFNAYIHTLGRAGQAHRAIRVFKFVMPVNGATPNTSTYNSMIAMFCHQEQEE 728
             G +PDTLF+N  IHTLGRAG+   AI VF+  MP     PNTSTYNSMIAM+C + +EE
Sbjct: 309  AGYEPDTLFYNCLIHTLGRAGKVREAIHVFEVEMPSKSVLPNTSTYNSMIAMYCRRAREE 368

Query: 729  KALEYLRHMENSPYCKPDVQSYSPLFKLYLRAGKFE-ACRQMLDDMVNKHHLSLDLATYA 905
            KA++ L  M+ S +CKPDVQ+Y PL K   R GK +     +LD+M+NKHHLSLD++TY+
Sbjct: 369  KAMKLLEEMQKSEHCKPDVQTYYPLLKSCFRTGKTDYDLSNLLDEMINKHHLSLDISTYS 428

Query: 906  LLIHGLCRGKKCEVAYLLFQAMIGKGITPRYQTCRLLLEEMKSKNMFDAAETIE 1067
            LLIHGLCR  KC+ AY LF+ MI + I PRY TC+LLL+E K KNM   A+ IE
Sbjct: 429  LLIHGLCRANKCDWAYQLFEKMISQDIKPRYLTCQLLLDEFKQKNMDGVADRIE 482


>ref|XP_004135302.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
            mitochondrial-like [Cucumis sativus]
          Length = 519

 Score =  469 bits (1207), Expect = e-130
 Identities = 221/354 (62%), Positives = 280/354 (79%), Gaps = 1/354 (0%)
 Frame = +3

Query: 9    MVQEMHADNLVSKNTIAKVMRRFCGAGEWKEAIRIFDELENYGLEKNTETMNILLNSLCK 188
            M++EM    LV+ +T+AK MRRF GAG+W+ A+RIFD+LE YGLEKNTE+MN+LL++LCK
Sbjct: 160  MLEEMKEARLVTLDTVAKAMRRFAGAGQWENAVRIFDDLETYGLEKNTESMNVLLDTLCK 219

Query: 189  EKRVEQARDVFLELKSHIQPNANTFNIFIYGWCKIYRIEEAYWTIQEMKGYGFRPCVISY 368
            EK+VE+AR ++LELKSHI PNANTFN+FI+GWCK+ +I+EA+WT++EMKGYG RPCVISY
Sbjct: 220  EKKVEKARQMYLELKSHIAPNANTFNMFIHGWCKVNKIDEAHWTLEEMKGYGHRPCVISY 279

Query: 369  TTIIQSYCEQFDFPKVYELLDEMQAQECAPNVVTFTSIMCSLTNSQMYEEALQIYERMES 548
            +TII  YC + +F KVYELLDEM AQ C  NV+T+T+IMCSLT S+ +EEALQI ERM+S
Sbjct: 280  STIILFYCHRCNFNKVYELLDEMDAQGCPANVITYTTIMCSLTKSEEFEEALQIAERMKS 339

Query: 549  IGCKPDTLFFNAYIHTLGRAGQAHRAIRVFKFVMPVNGATPNTSTYNSMIAMFCHQEQEE 728
             G +PDTLF+N  IHTLGRAG+   AI VF+  MP     PNTSTYNSMIAM+C + +EE
Sbjct: 340  AGYEPDTLFYNCLIHTLGRAGKVREAIHVFEVEMPSKSVLPNTSTYNSMIAMYCRRAREE 399

Query: 729  KALEYLRHMENSPYCKPDVQSYSPLFKLYLRAGKFE-ACRQMLDDMVNKHHLSLDLATYA 905
            KA++ L  M+ S +CKPDVQ+Y PL K   R GK +     +LD+M+NKHHLSLD++TY+
Sbjct: 400  KAMKLLEEMQKSEHCKPDVQTYYPLLKSCFRTGKTDYDLSNLLDEMINKHHLSLDISTYS 459

Query: 906  LLIHGLCRGKKCEVAYLLFQAMIGKGITPRYQTCRLLLEEMKSKNMFDAAETIE 1067
            LLIHGLCR  KC+ AY LF+ MI + I PRY TC+LLL+E K KNM   A+ IE
Sbjct: 460  LLIHGLCRANKCDWAYQLFEKMISQDIKPRYLTCQLLLDEFKQKNMDGVADRIE 513