BLASTX nr result

ID: Lithospermum22_contig00003835 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00003835
         (1085 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16670.3| unnamed protein product [Vitis vinifera]              146   2e-58
ref|XP_002511580.1| RING finger protein, putative [Ricinus commu...   142   1e-55
ref|XP_002302496.1| predicted protein [Populus trichocarpa] gi|2...   148   3e-53
ref|XP_002270913.2| PREDICTED: uncharacterized protein LOC100253...   143   2e-52
ref|NP_001241545.1| uncharacterized protein LOC100791789 [Glycin...   140   2e-52

>emb|CBI16670.3| unnamed protein product [Vitis vinifera]
          Length = 355

 Score =  146 bits (368), Expect(2) = 2e-58
 Identities = 73/120 (60%), Positives = 78/120 (65%), Gaps = 7/120 (5%)
 Frame = +3

Query: 3   EIVEQLSIMNHPDGDCPLCLTPLVDEDGSNKSLSFMKLMSCFHCFHGECIIRWWNWLQLQ 182
           E VE+LS MNHPDG+CPLCL PL  E   N  L FMKLMSCFHCFH ECIIRWWNWLQ Q
Sbjct: 106 EAVERLSTMNHPDGNCPLCLYPLFPEHKQNNILPFMKLMSCFHCFHSECIIRWWNWLQTQ 165

Query: 183 NETDXXXXXXXXXXXXKE----QGIH---EKSMGRCPVCRKVFLPKDIEHVLDLVGTTTS 341
            E D             E    QG+H   E S G CPVCRKVF  KDIEHVL LVG+ +S
Sbjct: 166 EEMDPDNSSSAIVQPSNEIEQQQGMHGMTEGSTGNCPVCRKVFHAKDIEHVLSLVGSHSS 225



 Score =  107 bits (266), Expect(2) = 2e-58
 Identities = 61/166 (36%), Positives = 87/166 (52%)
 Frame = +1

Query: 376 LDDSGSKIDDDENILHSDSEIIRRKKFEAILKIQQERSGLIEPKKNEVLLPGMYLPRPVA 555
           L  +G++I DDE +LHSDSE+ RR KFEA+LK+Q+E SGLIEPKKN V++PGM+L RP+A
Sbjct: 227 LSSNGTEITDDEKLLHSDSELTRRLKFEAVLKLQEENSGLIEPKKNGVIVPGMFLQRPIA 286

Query: 556 SPVEVLDTETAEEQRKHLAANSRSDMHAKPXXXXXXXXXXXXXXXXXXXXXKTPPLEQNR 735
            P  +       EQ++  A                                         
Sbjct: 287 PPPALSAKGPTSEQQQRDAITF-------------------------------------- 308

Query: 736 KEKEANTRGTSSKPSTSKDRNATARKDKGVNPKPQVRQWVRKENDP 873
              E ++ G+SS+ STS+ RN   R+ +  N +  V+QWV+K+N P
Sbjct: 309 --SETSSSGSSSRASTSEQRNLGMRRHRVRNSRKPVKQWVKKDNTP 352


>ref|XP_002511580.1| RING finger protein, putative [Ricinus communis]
           gi|223548760|gb|EEF50249.1| RING finger protein,
           putative [Ricinus communis]
          Length = 355

 Score =  142 bits (358), Expect(2) = 1e-55
 Identities = 67/116 (57%), Positives = 81/116 (69%), Gaps = 7/116 (6%)
 Frame = +3

Query: 3   EIVEQLSIMNHPDGDCPLCLTPLVDEDGSNKSLSFMKLMSCFHCFHGECIIRWWNWLQLQ 182
           E VE+LSIMNHPDG+CPLCL PLV ED  +++L FMKLMSCFHCFH ECI+RWWNWLQ +
Sbjct: 110 EAVEKLSIMNHPDGNCPLCLYPLVPEDEPDETLPFMKLMSCFHCFHSECIMRWWNWLQKE 169

Query: 183 NETDXXXXXXXXXXXXK----EQGIHE---KSMGRCPVCRKVFLPKDIEHVLDLVG 329
            +++            +    +  IHE   +S+G CPVCRKVF  KD EHVL LVG
Sbjct: 170 KDSNASSSSITTVHFVEGRVNQNAIHELMGESLGNCPVCRKVFHTKDFEHVLSLVG 225



 Score =  101 bits (252), Expect(2) = 1e-55
 Identities = 60/165 (36%), Positives = 86/165 (52%)
 Frame = +1

Query: 385 SGSKIDDDENILHSDSEIIRRKKFEAILKIQQERSGLIEPKKNEVLLPGMYLPRPVASPV 564
           S  + + ++ +L SDSE IRR+KFEA+LK+QQE +GLIEPKK+ V+LPGMYLP+PV  P 
Sbjct: 232 SSDRKEVNKELLQSDSESIRRQKFEALLKLQQENNGLIEPKKSLVVLPGMYLPQPVTVPA 291

Query: 565 EVLDTETAEEQRKHLAANSRSDMHAKPXXXXXXXXXXXXXXXXXXXXXKTPPLEQNRKEK 744
           ++++ ET  E ++                                          +R   
Sbjct: 292 QMVNKETTVETQR-----------------------------------------DSRVSM 310

Query: 745 EANTRGTSSKPSTSKDRNATARKDKGVNPKPQVRQWVRKENDPTS 879
           E  T  +S+KPS  + RN   R     N + QVRQWVRKE+ P++
Sbjct: 311 ETKTGDSSNKPSPRERRNLGRRMQVTQNARKQVRQWVRKEDGPSN 355


>ref|XP_002302496.1| predicted protein [Populus trichocarpa] gi|222844222|gb|EEE81769.1|
           predicted protein [Populus trichocarpa]
          Length = 354

 Score =  148 bits (373), Expect(2) = 3e-53
 Identities = 68/123 (55%), Positives = 82/123 (66%), Gaps = 10/123 (8%)
 Frame = +3

Query: 3   EIVEQLSIMNHPDGDCPLCLTPLVDEDGSNKSLSFMKLMSCFHCFHGECIIRWWNWLQLQ 182
           E VE+L++MNHPDGDCPLC+ P V ED  +++L FMKLMSCFHCFH ECI+RWWNW+Q +
Sbjct: 106 EAVEKLTVMNHPDGDCPLCMCPFVPEDEQDEALPFMKLMSCFHCFHCECIVRWWNWIQKE 165

Query: 183 NETDXXXXXXXXXXXXKE----------QGIHEKSMGRCPVCRKVFLPKDIEHVLDLVGT 332
            E++            KE           G+ E+ MG CPVCRKVF  KD EHVLDLVGT
Sbjct: 166 KESNTSTSSSTTLLQIKEMGNQNGLSDVHGVLEERMGDCPVCRKVFHVKDFEHVLDLVGT 225

Query: 333 TTS 341
             S
Sbjct: 226 QAS 228



 Score = 88.2 bits (217), Expect(2) = 3e-53
 Identities = 58/163 (35%), Positives = 81/163 (49%), Gaps = 1/163 (0%)
 Frame = +1

Query: 382 DSGSKIDDDENILHSDSEIIRRKKFEAILKIQQERSGLIEPKKNEVLLPGMYLPRPVASP 561
           DS ++I  +E +LHSDSE  RR+KFEAILK+QQE SGLIEPK+  V++PG+YLP+   S 
Sbjct: 231 DSEAEIKYEEKLLHSDSENFRRQKFEAILKLQQENSGLIEPKREIVVVPGIYLPQRATSA 290

Query: 562 VEVLDTETAEEQRKHLAANSRSDMHAKPXXXXXXXXXXXXXXXXXXXXXKTPPLEQNRKE 741
            + ++ ETAE Q                                           + R  
Sbjct: 291 AQTVNKETAEHQG-----------------------------------------TEARPS 309

Query: 742 KEANTRGTSSKPSTSKDRNATARKDKGV-NPKPQVRQWVRKEN 867
            E N   + ++P   + RN+  R  +GV N +  V QWVR+EN
Sbjct: 310 TETNLGSSLNRPRPRESRNSGRR--QGVRNSRRPVSQWVRREN 350


>ref|XP_002270913.2| PREDICTED: uncharacterized protein LOC100253028 [Vitis vinifera]
          Length = 429

 Score =  143 bits (360), Expect(2) = 2e-52
 Identities = 70/118 (59%), Positives = 75/118 (63%), Gaps = 5/118 (4%)
 Frame = +3

Query: 3   EIVEQLSIMNHPDGDCPLCLTPLVDEDGSNKSLSFMKLMSCFHCFHGECIIRWWNWLQLQ 182
           E VE+LS MNHPDG+CPLCL PL  E   N  L FMKLMSCFHCFH ECIIRWWNWLQ Q
Sbjct: 106 EAVERLSTMNHPDGNCPLCLYPLFPEHKQNNILPFMKLMSCFHCFHSECIIRWWNWLQTQ 165

Query: 183 NETDXXXXXXXXXXXXKE-----QGIHEKSMGRCPVCRKVFLPKDIEHVLDLVGTTTS 341
            E D                    G+ E S G CPVCRKVF  KDIEHVL LVG+ +S
Sbjct: 166 EEMDPDNSSTLHIQQGSTSSKSMHGMTEGSTGNCPVCRKVFHAKDIEHVLSLVGSHSS 223



 Score = 90.5 bits (223), Expect(2) = 2e-52
 Identities = 42/76 (55%), Positives = 57/76 (75%)
 Frame = +1

Query: 376 LDDSGSKIDDDENILHSDSEIIRRKKFEAILKIQQERSGLIEPKKNEVLLPGMYLPRPVA 555
           L  +G++I DDE +LHSDSE+ RR KFEA+LK+Q+E SGLIEPKKN V++PGM+L RP+A
Sbjct: 225 LSSNGTEITDDEKLLHSDSELTRRLKFEAVLKLQEENSGLIEPKKNGVIVPGMFLQRPIA 284

Query: 556 SPVEVLDTETAEEQRK 603
            P  +       EQ++
Sbjct: 285 PPPALSAKGPTSEQQQ 300


>ref|NP_001241545.1| uncharacterized protein LOC100791789 [Glycine max]
           gi|255644864|gb|ACU22932.1| unknown [Glycine max]
          Length = 366

 Score =  140 bits (354), Expect(2) = 2e-52
 Identities = 66/114 (57%), Positives = 78/114 (68%), Gaps = 1/114 (0%)
 Frame = +3

Query: 3   EIVEQLSIMNHPDGDCPLCLTPLVDEDGSNKSLSFMKLMSCFHCFHGECIIRWWNWLQLQ 182
           E  E+LS MNHPDGDCPLCL PLV ED  + +L FMKLMSCFHCFH ECIIRWW WLQ  
Sbjct: 110 EAAEKLSSMNHPDGDCPLCLFPLVPEDQESGTLPFMKLMSCFHCFHSECIIRWWKWLQNS 169

Query: 183 NETDXXXXXXXXXXXXKEQGIH-EKSMGRCPVCRKVFLPKDIEHVLDLVGTTTS 341
           N+ D            ++     E+S+G CPVCRK FL KD++HVL LVG+ +S
Sbjct: 170 NKVDSSNTDSAAAHRNQDNPKKTEESVGNCPVCRKPFLAKDLDHVLALVGSYSS 223



 Score = 92.4 bits (228), Expect(2) = 2e-52
 Identities = 63/175 (36%), Positives = 84/175 (48%), Gaps = 11/175 (6%)
 Frame = +1

Query: 376 LDDSGSKIDDDENILHSDSEIIRRKKFEAILKIQQERSGLIEPKKNEVLLPGMYLPRPVA 555
           L     +++++E +L S+ EI RR+K+EAIL +Q+E SGLIEPKK  V+LPGMYLP+PVA
Sbjct: 225 LSSDNEELNEEEKLLQSEDEINRRQKYEAILNLQKENSGLIEPKKEMVILPGMYLPQPVA 284

Query: 556 SPVEVLDTETAEEQRKHLAANSRSDMHAKPXXXXXXXXXXXXXXXXXXXXXKTPPLEQNR 735
            P      E+ E Q+                                    K PP     
Sbjct: 285 MPSSTPTKESDEPQQ------------------------------------KDPPAVV-- 306

Query: 736 KEKEANTRGTSSKPSTSKDRNATARKDK----------GVNP-KPQVRQWVRKEN 867
            EK A     SS PS+S+ RN  AR+ K            NP KP  +QWVR++N
Sbjct: 307 PEKHAGGTSNSSIPSSSRQRNFGARRQKARSDNHSSSTARNPRKPAQQQWVRRDN 361


Top