BLASTX nr result

ID: Lithospermum22_contig00003832 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00003832
         (942 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324468.1| predicted protein [Populus trichocarpa] gi|2...   112   1e-22
gb|ABK93515.1| unknown [Populus trichocarpa]                          112   1e-22
ref|XP_002864516.1| hypothetical protein ARALYDRAFT_495837 [Arab...   109   8e-22
ref|NP_568856.1| U4/U6.U5 tri-snRNP-associated protein 3 [Arabid...   109   1e-21
gb|AAM64674.1| unknown [Arabidopsis thaliana]                         109   1e-21

>ref|XP_002324468.1| predicted protein [Populus trichocarpa] gi|222865902|gb|EEF03033.1|
           predicted protein [Populus trichocarpa]
          Length = 195

 Score =  112 bits (281), Expect = 1e-22
 Identities = 55/71 (77%), Positives = 58/71 (81%)
 Frame = -2

Query: 560 NGDGEFGELMDEEEMAMMKQLGIPVGFDSTKGKAVAGNDVGAVRKVTKRQPRQYMNRRGG 381
           NG GE G LMDE+EM MMK+LGIP GFDSTKGK V G DV  V+ VTKRQPRQYMNRRGG
Sbjct: 125 NGMGEGGGLMDEDEMEMMKKLGIPTGFDSTKGKPVPGADVSGVKAVTKRQPRQYMNRRGG 184

Query: 380 FNRPLPAEVNR 348
           FNRPLP E NR
Sbjct: 185 FNRPLPLERNR 195


>gb|ABK93515.1| unknown [Populus trichocarpa]
          Length = 195

 Score =  112 bits (281), Expect = 1e-22
 Identities = 55/71 (77%), Positives = 58/71 (81%)
 Frame = -2

Query: 560 NGDGEFGELMDEEEMAMMKQLGIPVGFDSTKGKAVAGNDVGAVRKVTKRQPRQYMNRRGG 381
           NG GE G LMDE+EM MMK+LGIP GFDSTKGK V G DV  V+ VTKRQPRQYMNRRGG
Sbjct: 125 NGMGEGGGLMDEDEMEMMKKLGIPTGFDSTKGKPVPGADVSGVKAVTKRQPRQYMNRRGG 184

Query: 380 FNRPLPAEVNR 348
           FNRPLP E NR
Sbjct: 185 FNRPLPLERNR 195


>ref|XP_002864516.1| hypothetical protein ARALYDRAFT_495837 [Arabidopsis lyrata subsp.
           lyrata] gi|297310351|gb|EFH40775.1| hypothetical protein
           ARALYDRAFT_495837 [Arabidopsis lyrata subsp. lyrata]
          Length = 220

 Score =  109 bits (273), Expect = 8e-22
 Identities = 54/71 (76%), Positives = 56/71 (78%)
 Frame = -2

Query: 560 NGDGEFGELMDEEEMAMMKQLGIPVGFDSTKGKAVAGNDVGAVRKVTKRQPRQYMNRRGG 381
           NG GE  E MD  E+ MMK LGIP GFDSTKGK VAG DV  +R VTKRQPRQYMNRRGG
Sbjct: 150 NGGGEAEEGMDVNEVEMMKMLGIPTGFDSTKGKPVAGADVSGIRAVTKRQPRQYMNRRGG 209

Query: 380 FNRPLPAEVNR 348
           FNRPLPAE NR
Sbjct: 210 FNRPLPAERNR 220


>ref|NP_568856.1| U4/U6.U5 tri-snRNP-associated protein 3 [Arabidopsis thaliana]
           gi|13877941|gb|AAK44048.1|AF370233_1 unknown protein
           [Arabidopsis thaliana] gi|9757931|dbj|BAB08474.1|
           unnamed protein product [Arabidopsis thaliana]
           gi|21280845|gb|AAM44976.1| unknown protein [Arabidopsis
           thaliana] gi|332009510|gb|AED96893.1| U4/U6.U5
           tri-snRNP-associated protein 3 [Arabidopsis thaliana]
          Length = 219

 Score =  109 bits (272), Expect = 1e-21
 Identities = 54/71 (76%), Positives = 56/71 (78%)
 Frame = -2

Query: 560 NGDGEFGELMDEEEMAMMKQLGIPVGFDSTKGKAVAGNDVGAVRKVTKRQPRQYMNRRGG 381
           NG GE  E MD  E+ MMK LGIP GFDSTKGK VAG DV  +R VTKRQPRQYMNRRGG
Sbjct: 149 NGGGEDEEGMDVNEIEMMKMLGIPTGFDSTKGKPVAGADVSGIRAVTKRQPRQYMNRRGG 208

Query: 380 FNRPLPAEVNR 348
           FNRPLPAE NR
Sbjct: 209 FNRPLPAERNR 219


>gb|AAM64674.1| unknown [Arabidopsis thaliana]
          Length = 219

 Score =  109 bits (272), Expect = 1e-21
 Identities = 54/71 (76%), Positives = 56/71 (78%)
 Frame = -2

Query: 560 NGDGEFGELMDEEEMAMMKQLGIPVGFDSTKGKAVAGNDVGAVRKVTKRQPRQYMNRRGG 381
           NG GE  E MD  E+ MMK LGIP GFDSTKGK VAG DV  +R VTKRQPRQYMNRRGG
Sbjct: 149 NGGGEDEEGMDVNEIEMMKMLGIPTGFDSTKGKPVAGADVSGIRAVTKRQPRQYMNRRGG 208

Query: 380 FNRPLPAEVNR 348
           FNRPLPAE NR
Sbjct: 209 FNRPLPAERNR 219


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