BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00003749
         (1396 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539891.1| PREDICTED: protein THYLAKOID FORMATION1, chl...   365   2e-98
ref|XP_003540338.1| PREDICTED: protein THYLAKOID FORMATION1, chl...   363   4e-98
ref|XP_002517999.1| Protein THYLAKOID FORMATION1, chloroplast pr...   363   8e-98
ref|XP_003543363.1| PREDICTED: protein THYLAKOID FORMATION1, chl...   362   2e-97
gb|ACU18621.1| unknown [Glycine max]                                  360   4e-97

>ref|XP_003539891.1| PREDICTED: protein THYLAKOID FORMATION1, chloroplastic-like [Glycine
            max]
          Length = 291

 Score =  365 bits (936), Expect = 2e-98
 Identities = 196/290 (67%), Positives = 219/290 (75%), Gaps = 4/290 (1%)
 Frame = -1

Query: 1225 MATSVSSLSFSPISQTQS----TNADKNHNKFSFIKFRSTLSFDFLNFKSSSKPTNSTWR 1058
            MAT +SS SFS ++Q+ S    T    N   F F      + F  LN     + +NS  +
Sbjct: 1    MATVISSFSFSTLTQSSSQRNLTTLSSNSPTFRF-----RVGFSCLNV--GVRASNSASK 53

Query: 1057 SVLRCMSSAQDTPPTVSETKLNFLKAYKKPIPSIYNTVIQELIVQHHIMRYKKSYRYDAV 878
             V+RC SS  + PPTVSETKLNFLKAYK+PIPSIYNTV+QELIVQ H+MRYK+SYRYDAV
Sbjct: 54   MVVRCSSSVAE-PPTVSETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAV 112

Query: 877  FALGFVTVYDRLMEGYPSDEDRDIIFQAYINALNEDPQKYRADAKKLEDWAXXXXXXXXX 698
            FALGFVTVY++LMEGYPSDEDRD IFQAYI AL EDP++YR DAKKLE+WA         
Sbjct: 113  FALGFVTVYEQLMEGYPSDEDRDAIFQAYIQALKEDPEQYRVDAKKLEEWARSQNPNSLL 172

Query: 697  XXXXXXXXXXSILKDIAERAGSKGSFSYSRFFAIGLFRLLELVNATEPTFLEKLCAALNV 518
                       ILKDIAERAG KG FSYSRFFAIGLFRLLEL NA EPT LEKLCA LNV
Sbjct: 173  EFSSREGEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCAVLNV 232

Query: 517  NKKSVDRDLDVYRNLLTKLVQAKELLKEYVDREKKKREERAGSQKANEAV 368
            NK+SVDRDLDVYRNLL+KLVQAKELLKEYVDREKKKREERA  QK+NEA+
Sbjct: 233  NKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKREERAEPQKSNEAI 282


>ref|XP_003540338.1| PREDICTED: protein THYLAKOID FORMATION1, chloroplastic-like [Glycine
            max]
          Length = 297

 Score =  363 bits (933), Expect = 4e-98
 Identities = 183/288 (63%), Positives = 220/288 (76%), Gaps = 5/288 (1%)
 Frame = -1

Query: 1216 SVSSLSFSPISQTQSTNADKNHNKF-----SFIKFRSTLSFDFLNFKSSSKPTNSTWRSV 1052
            +++SLSFS ++         +  +F         FR+  S+ ++  ++S+ P+    + V
Sbjct: 3    ALTSLSFSAVTHCSERKVTLSSTRFLASSSEIFGFRTDFSYHYVGVRASNSPS----KMV 58

Query: 1051 LRCMSSAQDTPPTVSETKLNFLKAYKKPIPSIYNTVIQELIVQHHIMRYKKSYRYDAVFA 872
            ++CMSSA D PPTVSETKLNFLKAYK+PIPSIYNTV+QELIVQ H+M+YK+SYRYD VFA
Sbjct: 59   VQCMSSATDVPPTVSETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMKYKRSYRYDPVFA 118

Query: 871  LGFVTVYDRLMEGYPSDEDRDIIFQAYINALNEDPQKYRADAKKLEDWAXXXXXXXXXXX 692
            LGFVT+YD+LMEGYPSDEDRD IFQAYI AL EDP++YR DA+KLE+WA           
Sbjct: 119  LGFVTIYDKLMEGYPSDEDRDAIFQAYIKALKEDPEQYRIDARKLEEWARVQKPTSLVEF 178

Query: 691  XXXXXXXXSILKDIAERAGSKGSFSYSRFFAIGLFRLLELVNATEPTFLEKLCAALNVNK 512
                     ILKDIAERAG KG FSYSRFFA+GLFRLLEL NATEPT L+KLC ALN+NK
Sbjct: 179  SSKEGEVEGILKDIAERAGGKGEFSYSRFFAVGLFRLLELANATEPTILDKLCVALNINK 238

Query: 511  KSVDRDLDVYRNLLTKLVQAKELLKEYVDREKKKREERAGSQKANEAV 368
            +SVDRDLDVYR LL+KLVQAKELLKEY+DREKKKR+ERA  QKANEA+
Sbjct: 239  RSVDRDLDVYRILLSKLVQAKELLKEYIDREKKKRDERAEPQKANEAI 286


>ref|XP_002517999.1| Protein THYLAKOID FORMATION1, chloroplast precursor, putative
            [Ricinus communis] gi|223542981|gb|EEF44517.1| Protein
            THYLAKOID FORMATION1, chloroplast precursor, putative
            [Ricinus communis]
          Length = 299

 Score =  363 bits (931), Expect = 8e-98
 Identities = 193/289 (66%), Positives = 223/289 (77%), Gaps = 4/289 (1%)
 Frame = -1

Query: 1216 SVSSLSFSPISQ--TQSTNADKNHNKFS--FIKFRSTLSFDFLNFKSSSKPTNSTWRSVL 1049
            +V+S+SFS I+Q  T+  +       FS  F  FR  +     ++       +S+ R ++
Sbjct: 3    AVTSVSFSAIAQSFTERKSVASWSRSFSSNFDSFRFPVGGFSCHYVGVKASNSSSSRMLI 62

Query: 1048 RCMSSAQDTPPTVSETKLNFLKAYKKPIPSIYNTVIQELIVQHHIMRYKKSYRYDAVFAL 869
             CMS+A D PPTVSETK NFL +YKKPIPSIYNTV+QELIVQ H+MRYK+SYRYD VFAL
Sbjct: 63   HCMSTATDVPPTVSETKFNFLNSYKKPIPSIYNTVLQELIVQQHLMRYKRSYRYDPVFAL 122

Query: 868  GFVTVYDRLMEGYPSDEDRDIIFQAYINALNEDPQKYRADAKKLEDWAXXXXXXXXXXXX 689
            GFVTVYD+LM+GYPSDEDR+ IFQAYINALNE+P++YR DAKKLEDWA            
Sbjct: 123  GFVTVYDQLMQGYPSDEDREAIFQAYINALNEEPEQYRIDAKKLEDWARSQTPSSLVDFS 182

Query: 688  XXXXXXXSILKDIAERAGSKGSFSYSRFFAIGLFRLLELVNATEPTFLEKLCAALNVNKK 509
                    ILKDIAERAG+ GSFSYSRFFAIGLFRLLEL N+TEPT LEKLCAALN+NK+
Sbjct: 183  SKEGEVEGILKDIAERAGN-GSFSYSRFFAIGLFRLLELSNSTEPTVLEKLCAALNINKR 241

Query: 508  SVDRDLDVYRNLLTKLVQAKELLKEYVDREKKKREERAGSQKANEAVKS 362
             VDRDLDVYRNLL+KLVQAKELLKEYVDREKKK+EERA SQKANEAVKS
Sbjct: 242  GVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKQEERASSQKANEAVKS 290


>ref|XP_003543363.1| PREDICTED: protein THYLAKOID FORMATION1, chloroplastic-like [Glycine
            max]
          Length = 297

 Score =  362 bits (928), Expect = 2e-97
 Identities = 183/288 (63%), Positives = 219/288 (76%), Gaps = 5/288 (1%)
 Frame = -1

Query: 1216 SVSSLSFSPISQTQSTNADKNHNKF-----SFIKFRSTLSFDFLNFKSSSKPTNSTWRSV 1052
            +++SLSFS ++         +  +F         FR+  S+ ++  ++S    NS  + V
Sbjct: 3    ALTSLSFSAVTHCSERKVTLSSTRFLASSSELFGFRTDFSYHYVGVRAS----NSASKMV 58

Query: 1051 LRCMSSAQDTPPTVSETKLNFLKAYKKPIPSIYNTVIQELIVQHHIMRYKKSYRYDAVFA 872
            ++CMSSA D PPTVSETKLNFLKAYK+PIPSIYNTV+QELIVQ H+M+YK+SYRYD VFA
Sbjct: 59   VQCMSSATDVPPTVSETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMKYKRSYRYDPVFA 118

Query: 871  LGFVTVYDRLMEGYPSDEDRDIIFQAYINALNEDPQKYRADAKKLEDWAXXXXXXXXXXX 692
            LGFVT+YD+LMEGYPSDEDRD IFQAYI AL EDP++YR DA+KLE+WA           
Sbjct: 119  LGFVTIYDKLMEGYPSDEDRDAIFQAYIKALKEDPEQYRIDARKLEEWARVQSPTSLVEF 178

Query: 691  XXXXXXXXSILKDIAERAGSKGSFSYSRFFAIGLFRLLELVNATEPTFLEKLCAALNVNK 512
                     ILKDIAERAG KG FSYSRFFA+GLFRL+EL NATEPT L+KLCAALN+NK
Sbjct: 179  SSKEGEAERILKDIAERAGGKGEFSYSRFFAVGLFRLVELANATEPTILDKLCAALNINK 238

Query: 511  KSVDRDLDVYRNLLTKLVQAKELLKEYVDREKKKREERAGSQKANEAV 368
            +SVDRDLDVYR LL+KLVQAKELLKEY+DREKKKR+ER   QKANEA+
Sbjct: 239  RSVDRDLDVYRILLSKLVQAKELLKEYIDREKKKRDERVEPQKANEAI 286


>gb|ACU18621.1| unknown [Glycine max]
          Length = 297

 Score =  360 bits (925), Expect = 4e-97
 Identities = 183/288 (63%), Positives = 218/288 (75%), Gaps = 5/288 (1%)
 Frame = -1

Query: 1216 SVSSLSFSPISQTQSTNADKNHNKF-----SFIKFRSTLSFDFLNFKSSSKPTNSTWRSV 1052
            +++SLSFS +          +  +F         FR+  S+ ++  ++S    NS  + V
Sbjct: 3    ALTSLSFSAVIHCSERKVTLSSTRFLASSSELFGFRTDFSYHYVGVRAS----NSASKMV 58

Query: 1051 LRCMSSAQDTPPTVSETKLNFLKAYKKPIPSIYNTVIQELIVQHHIMRYKKSYRYDAVFA 872
            ++CMSSA D PPTVSETKLNFLKAYK+PIPSIYNTV+QELIVQ H+M+YK+SYRYD VFA
Sbjct: 59   VQCMSSATDVPPTVSETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMKYKRSYRYDPVFA 118

Query: 871  LGFVTVYDRLMEGYPSDEDRDIIFQAYINALNEDPQKYRADAKKLEDWAXXXXXXXXXXX 692
            LGFVT+YD+LMEGYPSDEDRD IFQAYI AL EDP++YR DA+KLE+WA           
Sbjct: 119  LGFVTIYDKLMEGYPSDEDRDAIFQAYIKALKEDPEQYRIDARKLEEWARVQSPTSLVEF 178

Query: 691  XXXXXXXXSILKDIAERAGSKGSFSYSRFFAIGLFRLLELVNATEPTFLEKLCAALNVNK 512
                     ILKDIAERAG KG FSYSRFFA+GLFRL+EL NATEPT L+KLCAALN+NK
Sbjct: 179  SSKEGEAERILKDIAERAGGKGEFSYSRFFAVGLFRLVELANATEPTILDKLCAALNINK 238

Query: 511  KSVDRDLDVYRNLLTKLVQAKELLKEYVDREKKKREERAGSQKANEAV 368
            +SVDRDLDVYR LL+KLVQAKELLKEY+DREKKKR+ER   QKANEA+
Sbjct: 239  RSVDRDLDVYRILLSKLVQAKELLKEYIDREKKKRDERVEPQKANEAI 286