BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00003693
         (1360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285868.1| PREDICTED: replication factor C subunit 5 [V...   536   e-150
ref|XP_002520343.1| replication factor C / DNA polymerase III ga...   535   e-149
ref|XP_002302226.1| predicted protein [Populus trichocarpa] gi|2...   532   e-149
ref|XP_003526636.1| PREDICTED: replication factor C subunit 5-li...   525   e-146
ref|XP_004149801.1| PREDICTED: replication factor C subunit 5-li...   523   e-146

>ref|XP_002285868.1| PREDICTED: replication factor C subunit 5 [Vitis vinifera]
            gi|302141794|emb|CBI18997.3| unnamed protein product
            [Vitis vinifera]
          Length = 360

 Score =  536 bits (1381), Expect = e-150
 Identities = 273/345 (79%), Positives = 307/345 (88%), Gaps = 2/345 (0%)
 Frame = -3

Query: 1238 EVISPMEIDGGDAYNNLKSKANNGKNVVAS--TTAAATPWVEKYRPQSLSDVAAHRDIID 1065
            E ++ M+ID  D   N   KAN GK+VV        ATPWVEKYRPQSL+DVAAHRDI+D
Sbjct: 3    EAVTVMDIDEED---NHLLKANKGKSVVVGGPPDRKATPWVEKYRPQSLADVAAHRDIVD 59

Query: 1064 TIDRLASGNRLPHLLLYGPPGTGKTSTILAMARKLYGTQLHNMVLELNASDDRGIDVVRQ 885
            TIDRL S NRLPHLLLYGPPGTGKTSTILA+ARKLYG Q HNM+LELNASDDRGIDVVRQ
Sbjct: 60   TIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGEQFHNMILELNASDDRGIDVVRQ 119

Query: 884  QIQDFASTQSMTFGAKFPVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQVNK 705
            QIQDFASTQS +FGAK  VKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICN VNK
Sbjct: 120  QIQDFASTQSFSFGAKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHVNK 179

Query: 704  IIPALQSRCTRFRFAPLESIHVTERIKHVIDTEGLNVTDSGLKALVRLSNGDMRKALNIL 525
            IIPALQSRCTRFRFAPL+++HVTER+KHVI+ E L+V++SGL ALVRLS+GDMRKALNIL
Sbjct: 180  IIPALQSRCTRFRFAPLDAVHVTERLKHVINAEKLDVSESGLAALVRLSSGDMRKALNIL 239

Query: 524  QSTHMASQEITEEAVYLCTGNPLPSDIELIAHWLLNEQFSVSCKQIADMKNRKGLALVDI 345
            QSTHMASQ+ITEEAVYLCTGNPLP DIE I++WLLNE F+ S  +I+++K RKGLALVD+
Sbjct: 240  QSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNESFAASFDRISEVKMRKGLALVDV 299

Query: 344  VREVTMFVFRIKMPSDVRIKLIEEMANIEYRLSFGCSDKLQLGSL 210
            VREVTMFVF+IKMPSDVR++LI ++A+IEYRLSFGC+DKLQLGSL
Sbjct: 300  VREVTMFVFKIKMPSDVRVQLINDLADIEYRLSFGCNDKLQLGSL 344


>ref|XP_002520343.1| replication factor C / DNA polymerase III gamma-tau subunit, putative
            [Ricinus communis] gi|223540562|gb|EEF42129.1|
            replication factor C / DNA polymerase III gamma-tau
            subunit, putative [Ricinus communis]
          Length = 360

 Score =  535 bits (1377), Expect = e-149
 Identities = 272/346 (78%), Positives = 306/346 (88%), Gaps = 1/346 (0%)
 Frame = -3

Query: 1238 EVISPMEIDGG-DAYNNLKSKANNGKNVVASTTAAATPWVEKYRPQSLSDVAAHRDIIDT 1062
            +V++ M+ID       N  SK N GKNV   T A  TPWVEKYRPQSL+DVAAHRDI+DT
Sbjct: 3    DVVTIMDIDEDVKEKQNQLSKPNKGKNVFVDTKA--TPWVEKYRPQSLADVAAHRDIVDT 60

Query: 1061 IDRLASGNRLPHLLLYGPPGTGKTSTILAMARKLYGTQLHNMVLELNASDDRGIDVVRQQ 882
            IDRL + NRLPHLLLYGPPGTGKTSTILA+ARKLYG Q HNM+LELNASDDRGIDVVRQQ
Sbjct: 61   IDRLTNENRLPHLLLYGPPGTGKTSTILAVARKLYGVQYHNMILELNASDDRGIDVVRQQ 120

Query: 881  IQDFASTQSMTFGAKFPVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQVNKI 702
            IQDFASTQS +F AK  VKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICN VNKI
Sbjct: 121  IQDFASTQSFSFDAKSAVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHVNKI 180

Query: 701  IPALQSRCTRFRFAPLESIHVTERIKHVIDTEGLNVTDSGLKALVRLSNGDMRKALNILQ 522
            IPALQSRCTRFRFAPL+ IHVT+R+KHVI+ EGL+V + GL A+VRLSNGDMRKALNILQ
Sbjct: 181  IPALQSRCTRFRFAPLDPIHVTDRLKHVIEAEGLDVPEPGLAAVVRLSNGDMRKALNILQ 240

Query: 521  STHMASQEITEEAVYLCTGNPLPSDIELIAHWLLNEQFSVSCKQIADMKNRKGLALVDIV 342
            STHMASQ+ITEEAV+LCTGNPLP DI+ I++WLLNE F+ S K+I+++K +KGLALVDIV
Sbjct: 241  STHMASQQITEEAVHLCTGNPLPKDIQQISYWLLNESFAESFKRISEIKTKKGLALVDIV 300

Query: 341  REVTMFVFRIKMPSDVRIKLIEEMANIEYRLSFGCSDKLQLGSLTS 204
            REVTMFVF+IKMPSDVR++LI +MA+IEYRLSFGCSDKLQLGSL +
Sbjct: 301  REVTMFVFKIKMPSDVRVQLINDMADIEYRLSFGCSDKLQLGSLVA 346


>ref|XP_002302226.1| predicted protein [Populus trichocarpa] gi|222843952|gb|EEE81499.1|
            predicted protein [Populus trichocarpa]
          Length = 363

 Score =  532 bits (1371), Expect = e-149
 Identities = 272/346 (78%), Positives = 303/346 (87%), Gaps = 3/346 (0%)
 Frame = -3

Query: 1238 EVISPMEIDGGDAYNNLKSKANNGKNVVASTT---AAATPWVEKYRPQSLSDVAAHRDII 1068
            E I+ M+ID  +  N+L SK N GK VV   T     ATPWVEKYRPQSL+DVAAHRDII
Sbjct: 3    EAIALMDIDEEENQNHL-SKPNKGKKVVVPATPPGGKATPWVEKYRPQSLADVAAHRDII 61

Query: 1067 DTIDRLASGNRLPHLLLYGPPGTGKTSTILAMARKLYGTQLHNMVLELNASDDRGIDVVR 888
            DTIDRL S NRLPHLLLYGPPGTGKTSTILA+ARKLYG Q HNM+LELNASDDRGIDVVR
Sbjct: 62   DTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVR 121

Query: 887  QQIQDFASTQSMTFGAKFPVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQVN 708
            +QIQDFASTQS +FGAK  VKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICN VN
Sbjct: 122  KQIQDFASTQSFSFGAKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHVN 181

Query: 707  KIIPALQSRCTRFRFAPLESIHVTERIKHVIDTEGLNVTDSGLKALVRLSNGDMRKALNI 528
            KIIPALQSRCTRFRFAPL+ +HV ER+KHVI+ EGL+V +SGL+AL  LSNGDMRKALNI
Sbjct: 182  KIIPALQSRCTRFRFAPLDPMHVGERLKHVIEAEGLDVPESGLEALKCLSNGDMRKALNI 241

Query: 527  LQSTHMASQEITEEAVYLCTGNPLPSDIELIAHWLLNEQFSVSCKQIADMKNRKGLALVD 348
            LQSTHMASQ+ITEE VYLCTGNPLP D++ I HWLLNE F+ S K+I+++K RKGLALVD
Sbjct: 242  LQSTHMASQQITEETVYLCTGNPLPQDVQQITHWLLNESFAESYKRISEIKTRKGLALVD 301

Query: 347  IVREVTMFVFRIKMPSDVRIKLIEEMANIEYRLSFGCSDKLQLGSL 210
            IVREVTMFVF+IKM SD+R+ LI ++A+IEYRLSFGC+DKLQLGSL
Sbjct: 302  IVREVTMFVFKIKMQSDIRVPLINDLADIEYRLSFGCNDKLQLGSL 347


>ref|XP_003526636.1| PREDICTED: replication factor C subunit 5-like [Glycine max]
          Length = 361

 Score =  525 bits (1351), Expect = e-146
 Identities = 266/343 (77%), Positives = 301/343 (87%), Gaps = 4/343 (1%)
 Frame = -3

Query: 1226 PMEIDGGDAYNNLKSKANNGKNVVAS----TTAAATPWVEKYRPQSLSDVAAHRDIIDTI 1059
            PM+ID     +   +  + GK+VV +        A PWVEKYRPQSL DVAAHRDI+DTI
Sbjct: 7    PMDIDD----HTYTASPDKGKSVVFAGNPPAAGKAIPWVEKYRPQSLDDVAAHRDIVDTI 62

Query: 1058 DRLASGNRLPHLLLYGPPGTGKTSTILAMARKLYGTQLHNMVLELNASDDRGIDVVRQQI 879
            DRL + NRLPHLLLYGPPGTGKTSTILA+ARKLYG+Q  NM+LELNASDDRGIDVVRQQI
Sbjct: 63   DRLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGSQYQNMILELNASDDRGIDVVRQQI 122

Query: 878  QDFASTQSMTFGAKFPVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQVNKII 699
            QDFASTQS++FG K  VKLVLLDEADAMTKDAQFALRRVIEKYTK+TRFALICN VNKII
Sbjct: 123  QDFASTQSLSFGVKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKII 182

Query: 698  PALQSRCTRFRFAPLESIHVTERIKHVIDTEGLNVTDSGLKALVRLSNGDMRKALNILQS 519
            PALQSRCTRFRFAPL+++HVTER+KHVI  EGL+V DSGL A VRLSNGDMRKALNILQS
Sbjct: 183  PALQSRCTRFRFAPLDAVHVTERLKHVIKAEGLDVEDSGLAAFVRLSNGDMRKALNILQS 242

Query: 518  THMASQEITEEAVYLCTGNPLPSDIELIAHWLLNEQFSVSCKQIADMKNRKGLALVDIVR 339
            THMASQ+ITEEAVYLCTGNPLP DIELI++WLLNEQF+ S K+I +MK RKGLAL+DIVR
Sbjct: 243  THMASQQITEEAVYLCTGNPLPKDIELISYWLLNEQFADSFKRIDEMKTRKGLALIDIVR 302

Query: 338  EVTMFVFRIKMPSDVRIKLIEEMANIEYRLSFGCSDKLQLGSL 210
            EVTMFVF+IKMPS VR++L+ ++A+IEYRLSFGC+DKLQLGS+
Sbjct: 303  EVTMFVFKIKMPSAVRVQLMNDLADIEYRLSFGCNDKLQLGSV 345


>ref|XP_004149801.1| PREDICTED: replication factor C subunit 5-like [Cucumis sativus]
            gi|449499057|ref|XP_004160708.1| PREDICTED: replication
            factor C subunit 5-like [Cucumis sativus]
          Length = 363

 Score =  523 bits (1348), Expect = e-146
 Identities = 267/348 (76%), Positives = 304/348 (87%), Gaps = 3/348 (0%)
 Frame = -3

Query: 1238 EVISPMEIDGGDAYNNLKSKANNGKNVVASTTAA---ATPWVEKYRPQSLSDVAAHRDII 1068
            EVIS M+ID  D  NN   KA  GKNV +   A    A PWVEK+RP+SL+DVAAHRDI+
Sbjct: 3    EVISVMDIDD-DNGNNEAEKAVKGKNVASPAAAPEGKAIPWVEKFRPKSLADVAAHRDIV 61

Query: 1067 DTIDRLASGNRLPHLLLYGPPGTGKTSTILAMARKLYGTQLHNMVLELNASDDRGIDVVR 888
            DTID+L S NRLPHLLLYGPPGTGKTSTILA+ARKLYGT  HNM+LELNASDDRGIDVVR
Sbjct: 62   DTIDKLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGTNYHNMILELNASDDRGIDVVR 121

Query: 887  QQIQDFASTQSMTFGAKFPVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQVN 708
            QQIQDFASTQS +FGAK  VKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICN VN
Sbjct: 122  QQIQDFASTQSFSFGAKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHVN 181

Query: 707  KIIPALQSRCTRFRFAPLESIHVTERIKHVIDTEGLNVTDSGLKALVRLSNGDMRKALNI 528
            KIIPALQSRCTRFRFAPL++ HVTER+++VI+ E L+VT+ GL ALVRL  GDMRKALNI
Sbjct: 182  KIIPALQSRCTRFRFAPLDNFHVTERLRYVIEAERLDVTEGGLAALVRLCTGDMRKALNI 241

Query: 527  LQSTHMASQEITEEAVYLCTGNPLPSDIELIAHWLLNEQFSVSCKQIADMKNRKGLALVD 348
            LQSTHMASQ ITEEAVYLCTGNP+P DIE I+ WLLNE FS S K+I+++K RKGLALVD
Sbjct: 242  LQSTHMASQHITEEAVYLCTGNPMPKDIEQISFWLLNEPFSDSFKRISEIKTRKGLALVD 301

Query: 347  IVREVTMFVFRIKMPSDVRIKLIEEMANIEYRLSFGCSDKLQLGSLTS 204
            IVREVT+FVF+I+MPS++R++LI ++A+IEYR++FGC+DKLQLGSL S
Sbjct: 302  IVREVTLFVFKIEMPSNIRVQLINDLADIEYRMTFGCNDKLQLGSLIS 349