BLASTX nr result

ID: Lithospermum22_contig00003644 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00003644
         (1196 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003592085.1| L3 Ribosomal protein [Medicago truncatula] g...   460   e-127
ref|XP_003592084.1| L3 Ribosomal protein [Medicago truncatula] g...   460   e-127
ref|XP_002302168.1| predicted protein [Populus trichocarpa] gi|1...   456   e-126
ref|XP_002524302.1| 60S ribosomal protein L3, putative [Ricinus ...   456   e-126
ref|XP_002306708.1| predicted protein [Populus trichocarpa] gi|1...   456   e-126

>ref|XP_003592085.1| L3 Ribosomal protein [Medicago truncatula]
            gi|355481133|gb|AES62336.1| L3 Ribosomal protein
            [Medicago truncatula]
          Length = 337

 Score =  460 bits (1183), Expect = e-127
 Identities = 219/247 (88%), Positives = 238/247 (96%)
 Frame = -1

Query: 1196 KKDVQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAHIMEIQVNGGSIAQKVDYAYGFF 1017
            KK++Q QLEK+KKYATVIRVLAHTQIRKMKGLKQKKAHIMEIQVNGG+IAQKVD+AY FF
Sbjct: 91   KKNIQTQLEKLKKYATVIRVLAHTQIRKMKGLKQKKAHIMEIQVNGGTIAQKVDFAYSFF 150

Query: 1016 EKQIPIDAVFQKDEMLDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPAR 837
            EKQ+PIDAVFQKDEM+DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPAR
Sbjct: 151  EKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPAR 210

Query: 836  VSFTVARAGQNGYHHRTELNKKVYRLGKVGQDTHGASTEFDRTEKDITPIGGFPHYGVVK 657
            VSFTVARAGQNGYHHRTELNKK+Y+LGKVG++TH A TEFDRTEKDITP+GGFPHYG+VK
Sbjct: 211  VSFTVARAGQNGYHHRTELNKKIYKLGKVGEETHDAQTEFDRTEKDITPMGGFPHYGIVK 270

Query: 656  EDFLMIKGGCVGPKKRVVTLRQTLLKQTSRAAGEEINIKFIDTSSIFGHGRFQTSEEKQK 477
            EDFLMIKGGCVGPKKRV+TLRQ+LLKQTSR A E+I +KFIDTSS FGHGRFQT+ EKQK
Sbjct: 271  EDFLMIKGGCVGPKKRVITLRQSLLKQTSRLALEDIKLKFIDTSSKFGHGRFQTTSEKQK 330

Query: 476  FFGRLKA 456
            F+GRLKA
Sbjct: 331  FYGRLKA 337


>ref|XP_003592084.1| L3 Ribosomal protein [Medicago truncatula]
            gi|355481132|gb|AES62335.1| L3 Ribosomal protein
            [Medicago truncatula]
          Length = 455

 Score =  460 bits (1183), Expect = e-127
 Identities = 219/247 (88%), Positives = 238/247 (96%)
 Frame = -1

Query: 1196 KKDVQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAHIMEIQVNGGSIAQKVDYAYGFF 1017
            KK++Q QLEK+KKYATVIRVLAHTQIRKMKGLKQKKAHIMEIQVNGG+IAQKVD+AY FF
Sbjct: 209  KKNIQTQLEKLKKYATVIRVLAHTQIRKMKGLKQKKAHIMEIQVNGGTIAQKVDFAYSFF 268

Query: 1016 EKQIPIDAVFQKDEMLDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPAR 837
            EKQ+PIDAVFQKDEM+DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPAR
Sbjct: 269  EKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPAR 328

Query: 836  VSFTVARAGQNGYHHRTELNKKVYRLGKVGQDTHGASTEFDRTEKDITPIGGFPHYGVVK 657
            VSFTVARAGQNGYHHRTELNKK+Y+LGKVG++TH A TEFDRTEKDITP+GGFPHYG+VK
Sbjct: 329  VSFTVARAGQNGYHHRTELNKKIYKLGKVGEETHDAQTEFDRTEKDITPMGGFPHYGIVK 388

Query: 656  EDFLMIKGGCVGPKKRVVTLRQTLLKQTSRAAGEEINIKFIDTSSIFGHGRFQTSEEKQK 477
            EDFLMIKGGCVGPKKRV+TLRQ+LLKQTSR A E+I +KFIDTSS FGHGRFQT+ EKQK
Sbjct: 389  EDFLMIKGGCVGPKKRVITLRQSLLKQTSRLALEDIKLKFIDTSSKFGHGRFQTTSEKQK 448

Query: 476  FFGRLKA 456
            F+GRLKA
Sbjct: 449  FYGRLKA 455


>ref|XP_002302168.1| predicted protein [Populus trichocarpa] gi|118483469|gb|ABK93633.1|
            unknown [Populus trichocarpa] gi|222843894|gb|EEE81441.1|
            predicted protein [Populus trichocarpa]
          Length = 389

 Score =  456 bits (1174), Expect = e-126
 Identities = 218/247 (88%), Positives = 237/247 (95%)
 Frame = -1

Query: 1196 KKDVQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAHIMEIQVNGGSIAQKVDYAYGFF 1017
            KK +Q+QLEK+KKYATVIRVLAHTQIRKMKGLKQKKAH+MEIQVNGG+IAQKVD+AYGFF
Sbjct: 143  KKSIQSQLEKLKKYATVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAQKVDFAYGFF 202

Query: 1016 EKQIPIDAVFQKDEMLDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPAR 837
            EKQ+PIDAVFQKDEM+DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPAR
Sbjct: 203  EKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPAR 262

Query: 836  VSFTVARAGQNGYHHRTELNKKVYRLGKVGQDTHGASTEFDRTEKDITPIGGFPHYGVVK 657
            VSFTVARAGQNGYHHRTELNKK+Y+LGK GQ+ H A TE+DRTEKDITPIGGFPHYGVVK
Sbjct: 263  VSFTVARAGQNGYHHRTELNKKIYKLGKTGQECHTAITEYDRTEKDITPIGGFPHYGVVK 322

Query: 656  EDFLMIKGGCVGPKKRVVTLRQTLLKQTSRAAGEEINIKFIDTSSIFGHGRFQTSEEKQK 477
            +D+LMIKG CVGPKKRVVTLRQTLLKQTSR A EEI +KF+DTSS FGHGRFQT++EKQK
Sbjct: 323  DDYLMIKGCCVGPKKRVVTLRQTLLKQTSRLAHEEIKLKFVDTSSKFGHGRFQTTQEKQK 382

Query: 476  FFGRLKA 456
            F+GRLKA
Sbjct: 383  FYGRLKA 389


>ref|XP_002524302.1| 60S ribosomal protein L3, putative [Ricinus communis]
            gi|223536393|gb|EEF38042.1| 60S ribosomal protein L3,
            putative [Ricinus communis]
          Length = 389

 Score =  456 bits (1173), Expect = e-126
 Identities = 219/247 (88%), Positives = 238/247 (96%)
 Frame = -1

Query: 1196 KKDVQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAHIMEIQVNGGSIAQKVDYAYGFF 1017
            KK +QAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAH+MEIQVNGG+IAQKVD+AYGFF
Sbjct: 143  KKSIQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAQKVDFAYGFF 202

Query: 1016 EKQIPIDAVFQKDEMLDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPAR 837
            EKQ+PIDAVFQKDEM+DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPAR
Sbjct: 203  EKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPAR 262

Query: 836  VSFTVARAGQNGYHHRTELNKKVYRLGKVGQDTHGASTEFDRTEKDITPIGGFPHYGVVK 657
            VSFTVARAGQNGYHHRTE+NKK+Y+LGK GQ++H A TE+DRTEKDITPIGGFPHYGVVK
Sbjct: 263  VSFTVARAGQNGYHHRTEMNKKIYKLGKGGQESHTAITEYDRTEKDITPIGGFPHYGVVK 322

Query: 656  EDFLMIKGGCVGPKKRVVTLRQTLLKQTSRAAGEEINIKFIDTSSIFGHGRFQTSEEKQK 477
            +D+LMIKG CVGPKKRVVTLRQ+LLKQTSR A EEI +KFIDTSS FGHGRFQT++EKQK
Sbjct: 323  DDYLMIKGCCVGPKKRVVTLRQSLLKQTSRVALEEIKLKFIDTSSKFGHGRFQTTQEKQK 382

Query: 476  FFGRLKA 456
            F+GRLKA
Sbjct: 383  FYGRLKA 389


>ref|XP_002306708.1| predicted protein [Populus trichocarpa] gi|118481111|gb|ABK92509.1|
            unknown [Populus trichocarpa] gi|222856157|gb|EEE93704.1|
            predicted protein [Populus trichocarpa]
          Length = 389

 Score =  456 bits (1172), Expect = e-126
 Identities = 216/247 (87%), Positives = 239/247 (96%)
 Frame = -1

Query: 1196 KKDVQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAHIMEIQVNGGSIAQKVDYAYGFF 1017
            KK +Q+QLEK+KKYATVIRVLAHTQIRKMKGLKQKKAH+MEIQVNGG+IAQKVD+AYGFF
Sbjct: 143  KKSIQSQLEKLKKYATVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAQKVDFAYGFF 202

Query: 1016 EKQIPIDAVFQKDEMLDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPAR 837
            EKQ+PIDAVFQKDEM+D+IGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPAR
Sbjct: 203  EKQVPIDAVFQKDEMIDVIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPAR 262

Query: 836  VSFTVARAGQNGYHHRTELNKKVYRLGKVGQDTHGASTEFDRTEKDITPIGGFPHYGVVK 657
            VSFTVARAGQNGYHHRTELNKK+Y++GKVGQ+TH A TE+DRTEKDITP+GGFPHYGVVK
Sbjct: 263  VSFTVARAGQNGYHHRTELNKKIYKVGKVGQETHTAITEYDRTEKDITPLGGFPHYGVVK 322

Query: 656  EDFLMIKGGCVGPKKRVVTLRQTLLKQTSRAAGEEINIKFIDTSSIFGHGRFQTSEEKQK 477
            +D+LMIKG CVGPKKRVVTLRQ+LLKQTSR A EEI +KF+DTSS FGHGRFQT++EKQK
Sbjct: 323  DDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTQEKQK 382

Query: 476  FFGRLKA 456
            F+GRLKA
Sbjct: 383  FYGRLKA 389


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