BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00003564
         (903 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001235805.1| uncharacterized protein LOC100306491 [Glycin...   259   5e-67
ref|XP_003537110.1| PREDICTED: photosystem II reaction center PS...   256   5e-66
ref|XP_002526538.1| Photosystem II reaction center W protein, pu...   256   7e-66
ref|XP_002271666.1| PREDICTED: photosystem II reaction center PS...   247   2e-63
gb|AFK35252.1| unknown [Medicago truncatula]                          246   4e-63

>ref|NP_001235805.1| uncharacterized protein LOC100306491 [Glycine max]
           gi|255628701|gb|ACU14695.1| unknown [Glycine max]
          Length = 179

 Score =  259 bits (663), Expect = 5e-67
 Identities = 132/179 (73%), Positives = 144/179 (80%)
 Frame = -3

Query: 787 MATLRFVAFSSPISQCYNQPRSLPGTTFAIVHHGLQSSFRGQALRMPSQHLTTQRQNTRM 608
           MATL  +A SSP+S    +PRS      +IVH    SSF GQ L +P   L   RQNT M
Sbjct: 1   MATLHSLALSSPLSNSLQKPRSC-AVPSSIVHQSTNSSFNGQTLHLPCLRLPVLRQNTPM 59

Query: 607 PRLTAMMVTPKIQFIQGTDEQTIPDVKLTKSRDGTNGMAIFKFDEPSVFDSSGEVGDITG 428
                MMV PKIQFIQGTDEQTIPDV+LTKSRDGTNGMAIF FD+PSVFDSSGE+GDITG
Sbjct: 60  HMPVIMMVKPKIQFIQGTDEQTIPDVRLTKSRDGTNGMAIFTFDQPSVFDSSGEIGDITG 119

Query: 427 FYMIDEEGVLQSVDVSAKFVNGKPAGIEAKYVMRTPRDWDRFMRFMERYANANGLQFVK 251
           FYMIDEEGVLQSVDVSAKFVNGKP+ IEAKYVMR+PRDWDRFMRFMERY+NANGLQF+K
Sbjct: 120 FYMIDEEGVLQSVDVSAKFVNGKPSIIEAKYVMRSPRDWDRFMRFMERYSNANGLQFIK 178


>ref|XP_003537110.1| PREDICTED: photosystem II reaction center PSB28 protein,
           chloroplastic-like [Glycine max]
          Length = 179

 Score =  256 bits (654), Expect = 5e-66
 Identities = 131/179 (73%), Positives = 143/179 (79%)
 Frame = -3

Query: 787 MATLRFVAFSSPISQCYNQPRSLPGTTFAIVHHGLQSSFRGQALRMPSQHLTTQRQNTRM 608
           MATL  +A SSP+S    +P S      +IVH    SSF GQ LRMP   L   RQ+T M
Sbjct: 1   MATLHSLALSSPLSNSLQKPHSY-AVPSSIVHQSTNSSFNGQTLRMPCLRLPVLRQSTPM 59

Query: 607 PRLTAMMVTPKIQFIQGTDEQTIPDVKLTKSRDGTNGMAIFKFDEPSVFDSSGEVGDITG 428
                MM  PKIQFIQGTDEQTIPDV+LTKSRDGTNGMAIF FD+PSVFDSSGE+GDITG
Sbjct: 60  HMPVIMMAKPKIQFIQGTDEQTIPDVRLTKSRDGTNGMAIFTFDQPSVFDSSGEIGDITG 119

Query: 427 FYMIDEEGVLQSVDVSAKFVNGKPAGIEAKYVMRTPRDWDRFMRFMERYANANGLQFVK 251
           FYMIDEEGVLQSVDVSAKFVNGKP+ IEAKYVMR+PR+WDRFMRFMERY+NANGLQFVK
Sbjct: 120 FYMIDEEGVLQSVDVSAKFVNGKPSIIEAKYVMRSPREWDRFMRFMERYSNANGLQFVK 178


>ref|XP_002526538.1| Photosystem II reaction center W protein, putative [Ricinus
           communis] gi|223534099|gb|EEF35816.1| Photosystem II
           reaction center W protein, putative [Ricinus communis]
          Length = 178

 Score =  256 bits (653), Expect = 7e-66
 Identities = 131/180 (72%), Positives = 147/180 (81%)
 Frame = -3

Query: 787 MATLRFVAFSSPISQCYNQPRSLPGTTFAIVHHGLQSSFRGQALRMPSQHLTTQRQNTRM 608
           MATL+ +AF+SP+S   +Q RS PG+    VH   +S F G++LR+    LT+ RQ +  
Sbjct: 1   MATLQSLAFASPVSHYSHQTRSFPGSFCWAVHRIARSPFSGKSLRLSHPQLTSTRQKSS- 59

Query: 607 PRLTAMMVTPKIQFIQGTDEQTIPDVKLTKSRDGTNGMAIFKFDEPSVFDSSGEVGDITG 428
            R   MM  P IQFIQGTDEQTIPDV+LTKSRDGTNGMAIF FDEPSVFDSS E+GDITG
Sbjct: 60  -RFITMMAKPSIQFIQGTDEQTIPDVRLTKSRDGTNGMAIFTFDEPSVFDSSAELGDITG 118

Query: 427 FYMIDEEGVLQSVDVSAKFVNGKPAGIEAKYVMRTPRDWDRFMRFMERYANANGLQFVKS 248
           FYMIDEEGVLQSVDVSAKFVNGKPA IEAKYVMR+PR+WDRFMRFMERYANANGLQFVKS
Sbjct: 119 FYMIDEEGVLQSVDVSAKFVNGKPARIEAKYVMRSPREWDRFMRFMERYANANGLQFVKS 178


>ref|XP_002271666.1| PREDICTED: photosystem II reaction center PSB28 protein,
           chloroplastic [Vitis vinifera]
           gi|297744226|emb|CBI37196.3| unnamed protein product
           [Vitis vinifera]
          Length = 179

 Score =  247 bits (631), Expect = 2e-63
 Identities = 122/179 (68%), Positives = 144/179 (80%)
 Frame = -3

Query: 787 MATLRFVAFSSPISQCYNQPRSLPGTTFAIVHHGLQSSFRGQALRMPSQHLTTQRQNTRM 608
           MA L+ +AF+SP+S C  Q   L G +   VH    SSF G++L +P       ++++  
Sbjct: 1   MAALQSLAFTSPLSHCCKQS-PLSGLSSWAVHRSAHSSFNGRSLHLPRPQWAALKRSSST 59

Query: 607 PRLTAMMVTPKIQFIQGTDEQTIPDVKLTKSRDGTNGMAIFKFDEPSVFDSSGEVGDITG 428
             L  MMV P IQFIQGTDEQT+PDV+LT+SRDGTNGMAIFKF++PSVFDSSGEVGDITG
Sbjct: 60  SGLITMMVKPTIQFIQGTDEQTVPDVRLTQSRDGTNGMAIFKFEQPSVFDSSGEVGDITG 119

Query: 427 FYMIDEEGVLQSVDVSAKFVNGKPAGIEAKYVMRTPRDWDRFMRFMERYANANGLQFVK 251
           FYMIDEEGVLQSVDVSAKF+NGKP+GIEAKYVMR+PR+WDRFMRFMERY+N NGLQFVK
Sbjct: 120 FYMIDEEGVLQSVDVSAKFINGKPSGIEAKYVMRSPREWDRFMRFMERYSNENGLQFVK 178


>gb|AFK35252.1| unknown [Medicago truncatula]
          Length = 182

 Score =  246 bits (629), Expect = 4e-63
 Identities = 129/183 (70%), Positives = 145/183 (79%), Gaps = 4/183 (2%)
 Frame = -3

Query: 787 MATLRFVAFSSPISQCYNQPRSLPGTTFAIVHHG---LQSSFRGQALRMPSQHLTTQRQN 617
           MAT+  +AFSSP+     +PRS   T+  I  HG   L SSF GQ L +PS  L    Q 
Sbjct: 1   MATMHSLAFSSPLYNSIQKPRSYSATSLII--HGSLNLNSSFNGQHLHVPSLRLPMITQK 58

Query: 616 TRMPRLTAMMV-TPKIQFIQGTDEQTIPDVKLTKSRDGTNGMAIFKFDEPSVFDSSGEVG 440
           T M     MM   PKIQFIQG+DE TIPDVKLTKS+DGTNGMAIF+FD+PSVFDSSGEVG
Sbjct: 59  TPMHMPVIMMAGKPKIQFIQGSDELTIPDVKLTKSKDGTNGMAIFRFDQPSVFDSSGEVG 118

Query: 439 DITGFYMIDEEGVLQSVDVSAKFVNGKPAGIEAKYVMRTPRDWDRFMRFMERYANANGLQ 260
           DITGFYMIDEEGVLQSVDV+AKFVNGKP+GIEAKY+MRTPRDWDRFMRFMERY++ANGLQ
Sbjct: 119 DITGFYMIDEEGVLQSVDVNAKFVNGKPSGIEAKYIMRTPRDWDRFMRFMERYSDANGLQ 178

Query: 259 FVK 251
           F+K
Sbjct: 179 FIK 181