BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00003530
         (1218 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAM28759.1| ROX1 homologue [Nicotiana tabacum]                     87   1e-14
gb|ABH01084.1| putative ROX1 [Nicotiana tabacum]                       83   1e-13
dbj|BAM28758.1| ROX1 homologue [Nicotiana benthamiana]                 75   4e-11
gb|ABK93102.1| unknown [Populus trichocarpa]                           67   1e-08
ref|XP_002279294.1| PREDICTED: protein E6 [Vitis vinifera] gi|14...    67   1e-08

>dbj|BAM28759.1| ROX1 homologue [Nicotiana tabacum]
          Length = 346

 Score = 86.7 bits (213), Expect = 1e-14
 Identities = 49/116 (42%), Positives = 63/116 (54%), Gaps = 1/116 (0%)
 Frame = +3

Query: 78  QIEARDNQMFNKIPSKTNELEKQIPLNKETENNPMSNPKEQEPNFVPEDEQ-SYGLYAHE 254
           QI ARD Q FNKIPS   E E Q  +            KEQEPNF+PE+E  +YGLY H+
Sbjct: 21  QIHARDGQFFNKIPSNNGEKETQTVIPN----------KEQEPNFMPENENGAYGLYGHD 70

Query: 255 SFNLPQSSVTSXXXXXXXXXXXXXAKYLPKNYNPVAYVTEPEDFNEDSTFSEKAYT 422
           S   P ++  +             +KYLPKNYNPV+YVT PED   ++  +   +T
Sbjct: 71  SVTTPNTNNPTVHDLPN-------SKYLPKNYNPVSYVTVPEDNTNENDLNNNEFT 119



 Score = 67.0 bits (162), Expect = 9e-09
 Identities = 32/56 (57%), Positives = 41/56 (73%), Gaps = 3/56 (5%)
 Frame = +3

Query: 693 QPQGMSDTRFLENGRYYYDINSEKYSVHPNDNA---MAMRNQYHPRGSYGNHNANS 851
           Q QGMSDTRFL NG++YYDIN+EK++  P +NA    AM  QY+ R +YGN+  NS
Sbjct: 273 QQQGMSDTRFLGNGKFYYDINAEKHARDPYENAREFAAMNQQYNSRNTYGNNEYNS 328


>gb|ABH01084.1| putative ROX1 [Nicotiana tabacum]
          Length = 346

 Score = 83.2 bits (204), Expect = 1e-13
 Identities = 48/116 (41%), Positives = 61/116 (52%), Gaps = 1/116 (0%)
 Frame = +3

Query: 78  QIEARDNQMFNKIPSKTNELEKQIPLNKETENNPMSNPKEQEPNFVPEDEQ-SYGLYAHE 254
           QI ARD Q FNK+PS   E E Q  +            KEQEPNF+P +E  +YGLY H+
Sbjct: 21  QIHARDGQFFNKVPSNNGEKETQTVIPN----------KEQEPNFMPXNENGAYGLYGHD 70

Query: 255 SFNLPQSSVTSXXXXXXXXXXXXXAKYLPKNYNPVAYVTEPEDFNEDSTFSEKAYT 422
           S      SV +             +KYLPKNYNPV+YVT PED   ++  +   +T
Sbjct: 71  SVTTNNPSVHNLPN----------SKYLPKNYNPVSYVTVPEDNTNENDLNNNEFT 116



 Score = 63.9 bits (154), Expect = 8e-08
 Identities = 31/56 (55%), Positives = 40/56 (71%), Gaps = 3/56 (5%)
 Frame = +3

Query: 693 QPQGMSDTRFLENGRYYYDINSEKYSVHPNDNA---MAMRNQYHPRGSYGNHNANS 851
           Q QGMSDTRFL NG++YYDIN+ K++  P +NA    AM  QY+ R +YGN+  NS
Sbjct: 273 QQQGMSDTRFLGNGKFYYDINAGKHARDPYENAREFAAMNQQYNNRNTYGNNEYNS 328


>dbj|BAM28758.1| ROX1 homologue [Nicotiana benthamiana]
          Length = 346

 Score = 74.7 bits (182), Expect = 4e-11
 Identities = 43/115 (37%), Positives = 58/115 (50%)
 Frame = +3

Query: 78  QIEARDNQMFNKIPSKTNELEKQIPLNKETENNPMSNPKEQEPNFVPEDEQSYGLYAHES 257
           QI ARD Q FNK+     E + Q  +            KEQEPNF+PE+E   G Y H+S
Sbjct: 21  QIHARDGQFFNKVSRNNGEKQTQTVIPN----------KEQEPNFMPENEN--GAYGHDS 68

Query: 258 FNLPQSSVTSXXXXXXXXXXXXXAKYLPKNYNPVAYVTEPEDFNEDSTFSEKAYT 422
              P ++  +             +KYLPKNYNPV+YVT PED   ++  +   +T
Sbjct: 69  VTTPNTNNPTVHDLPI-------SKYLPKNYNPVSYVTVPEDNTNENDLNNNEFT 116



 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 30/52 (57%), Positives = 39/52 (75%), Gaps = 3/52 (5%)
 Frame = +3

Query: 693 QPQGMSDTRFLENGRYYYDINSEKYSVHPNDNA---MAMRNQYHPRGSYGNH 839
           Q QGMSDTRFL NG++YYDIN+EK++  P +NA    AM  QY+ R +YGN+
Sbjct: 273 QQQGMSDTRFLGNGKFYYDINAEKHARDPYENAREFAAMNQQYNNRNTYGNN 324


>gb|ABK93102.1| unknown [Populus trichocarpa]
          Length = 285

 Score = 66.6 bits (161), Expect = 1e-08
 Identities = 28/55 (50%), Positives = 38/55 (69%)
 Frame = +3

Query: 684 NRVQPQGMSDTRFLENGRYYYDINSEKYSVHPNDNAMAMRNQYHPRGSYGNHNAN 848
           N  + QGMSDTR+LE+G+YYYD+N+E  + +PN      RN Y+ RG Y N+N N
Sbjct: 188 NNDEKQGMSDTRYLEHGKYYYDVNNENSNYYPNQYQQNSRNNYNTRGYYNNNNNN 242


>ref|XP_002279294.1| PREDICTED: protein E6 [Vitis vinifera] gi|147778580|emb|CAN60306.1|
           hypothetical protein VITISV_005068 [Vitis vinifera]
          Length = 253

 Score = 66.6 bits (161), Expect = 1e-08
 Identities = 32/52 (61%), Positives = 38/52 (73%), Gaps = 2/52 (3%)
 Frame = +3

Query: 699 QGMSDTRFLENGRYYYDINSEK--YSVHPNDNAMAMRNQYHPRGSYGNHNAN 848
           QGMSDTRFLENGRYYYD+NSEK   + + N      RN+Y+ RG YGN+N N
Sbjct: 174 QGMSDTRFLENGRYYYDLNSEKNYRNEYENSRTEYSRNEYNNRGYYGNNNNN 225



 Score = 58.2 bits (139), Expect = 4e-06
 Identities = 30/72 (41%), Positives = 44/72 (61%), Gaps = 5/72 (6%)
 Frame = +3

Query: 78  QIEARDNQMFNKIPSKTN-----ELEKQIPLNKETENNPMSNPKEQEPNFVPEDEQSYGL 242
           QI ARD+Q F+K+ +  N     + E Q+P  +E E+  +   +EQEP FVP+ ++ YGL
Sbjct: 22  QIHARDSQFFSKVTNPNNNNNNVKEESQLPNKEELESKQLKE-QEQEPTFVPDTQEGYGL 80

Query: 243 YAHESFNLPQSS 278
           Y H S  LP S+
Sbjct: 81  YGHGSGQLPPST 92