BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00003506
         (1077 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004157509.1| PREDICTED: F-box protein At3g54460-like [Cuc...   420   e-115
ref|XP_004142389.1| PREDICTED: F-box protein At3g54460-like [Cuc...   420   e-115
ref|XP_002456942.1| hypothetical protein SORBIDRAFT_03g046010 [S...   420   e-115
ref|XP_002877979.1| SNF2 domain-containing protein [Arabidopsis ...   407   e-111
ref|NP_680129.1| F-box protein [Arabidopsis thaliana] gi|7518182...   400   e-109

>ref|XP_004157509.1| PREDICTED: F-box protein At3g54460-like [Cucumis sativus]
          Length = 1366

 Score =  420 bits (1080), Expect = e-115
 Identities = 214/343 (62%), Positives = 247/343 (72%), Gaps = 31/343 (9%)
 Frame = -3

Query: 1075 IRVTEAGNDIQETMDELVQKGLEPGSEEYVLLRDKLHLGTSCMRCKAWCRLPVITPCRHL 896
            I+V EAG DIQETMD LV  GL+P S+EY  L+  L  G SC RC  WCRLPVI PCRHL
Sbjct: 1012 IKVAEAGEDIQETMDILVDDGLDPMSQEYSYLKYNLLYGGSCSRCGEWCRLPVIAPCRHL 1071

Query: 895  LCIGCVALDSEKCTFPECGNLYKMQSPETLARPENPNPKWPVPQDLIELQPSYKQDDWNP 716
            LC+ CVALDSE CTFP CG LY MQ+PETLARPENPNPKWPVP+DLIELQPSYKQD+W+P
Sbjct: 1072 LCLDCVALDSEGCTFPGCGKLYVMQTPETLARPENPNPKWPVPKDLIELQPSYKQDNWDP 1131

Query: 715  NWQXXXXXXXXXXXXXXKNLHQTN--------------------------MKSHEEQAPD 614
            +WQ              K+L +TN                          + S  E   D
Sbjct: 1132 DWQSTSSSKVAYLIERLKDLSETNNEAALLPPSSLTKSGALLQEVDHSRAITSDHEIVRD 1191

Query: 613  KVIIFSQFLEHIHVIEEQLKVADIQFVGMYSPMHSIHKIKALETFQHDRHCMALVMDGST 434
            KV+IFSQFLEHIHVIE+QL +A I+F GMYSPMH+ +K+K+L  FQHD  CM L+MDGS 
Sbjct: 1192 KVLIFSQFLEHIHVIEQQLTIAGIRFAGMYSPMHASNKMKSLAMFQHDASCMVLLMDGSA 1251

Query: 433  ALGLDLSFVTHVYLMKPIWDKSIEEQVISRAHRMGATQPIHVETLAMSGTIEEQMLRFLQ 254
            ALGLDLSFVT+V+LM+PIWD+S+EEQVISRAHRMGA +PIHVETL M  TIEEQM++FLQ
Sbjct: 1252 ALGLDLSFVTYVFLMEPIWDRSMEEQVISRAHRMGAIRPIHVETLVMHETIEEQMVQFLQ 1311

Query: 253  DADECKKLMKE-----DQDCVRPCRSVHDFAESNYLSQLSFVR 140
            D DECK+LMKE     D +  R  RS+HDFA SNYLSQL FVR
Sbjct: 1312 DPDECKRLMKEEFGKPDYEGPRAHRSLHDFAGSNYLSQLKFVR 1354


>ref|XP_004142389.1| PREDICTED: F-box protein At3g54460-like [Cucumis sativus]
          Length = 1366

 Score =  420 bits (1080), Expect = e-115
 Identities = 214/343 (62%), Positives = 247/343 (72%), Gaps = 31/343 (9%)
 Frame = -3

Query: 1075 IRVTEAGNDIQETMDELVQKGLEPGSEEYVLLRDKLHLGTSCMRCKAWCRLPVITPCRHL 896
            I+V EAG DIQETMD LV  GL+P S+EY  L+  L  G SC RC  WCRLPVI PCRHL
Sbjct: 1012 IKVAEAGEDIQETMDILVDDGLDPMSQEYSYLKYNLLYGGSCSRCGEWCRLPVIAPCRHL 1071

Query: 895  LCIGCVALDSEKCTFPECGNLYKMQSPETLARPENPNPKWPVPQDLIELQPSYKQDDWNP 716
            LC+ CVALDSE CTFP CG LY MQ+PETLARPENPNPKWPVP+DLIELQPSYKQD+W+P
Sbjct: 1072 LCLDCVALDSEGCTFPGCGKLYVMQTPETLARPENPNPKWPVPKDLIELQPSYKQDNWDP 1131

Query: 715  NWQXXXXXXXXXXXXXXKNLHQTN--------------------------MKSHEEQAPD 614
            +WQ              K+L +TN                          + S  E   D
Sbjct: 1132 DWQSTSSSKVAYLIERLKDLSETNNEAALLPPSSLTKSGALLQEVDHSRAITSDHEIVRD 1191

Query: 613  KVIIFSQFLEHIHVIEEQLKVADIQFVGMYSPMHSIHKIKALETFQHDRHCMALVMDGST 434
            KV+IFSQFLEHIHVIE+QL +A I+F GMYSPMH+ +K+K+L  FQHD  CM L+MDGS 
Sbjct: 1192 KVLIFSQFLEHIHVIEQQLTIAGIRFAGMYSPMHASNKMKSLAMFQHDASCMVLLMDGSA 1251

Query: 433  ALGLDLSFVTHVYLMKPIWDKSIEEQVISRAHRMGATQPIHVETLAMSGTIEEQMLRFLQ 254
            ALGLDLSFVT+V+LM+PIWD+S+EEQVISRAHRMGA +PIHVETL M  TIEEQM++FLQ
Sbjct: 1252 ALGLDLSFVTYVFLMEPIWDRSMEEQVISRAHRMGAIRPIHVETLVMHETIEEQMVQFLQ 1311

Query: 253  DADECKKLMKE-----DQDCVRPCRSVHDFAESNYLSQLSFVR 140
            D DECK+LMKE     D +  R  RS+HDFA SNYLSQL FVR
Sbjct: 1312 DPDECKRLMKEEFGKPDYEGPRAHRSLHDFAGSNYLSQLKFVR 1354


>ref|XP_002456942.1| hypothetical protein SORBIDRAFT_03g046010 [Sorghum bicolor]
            gi|241928917|gb|EES02062.1| hypothetical protein
            SORBIDRAFT_03g046010 [Sorghum bicolor]
          Length = 1175

 Score =  420 bits (1080), Expect = e-115
 Identities = 213/328 (64%), Positives = 246/328 (75%), Gaps = 17/328 (5%)
 Frame = -3

Query: 1075 IRVTEAGNDIQETMDELVQKGLEPGSEEYVLLRDKLHLGTSCMRCKAWCRLPVITPCRHL 896
            IRV EAG DIQETMDELVQ GL+P S+EY  +R  L  G SC RC+ WCRLPVITPCRHL
Sbjct: 848  IRVAEAGQDIQETMDELVQHGLDPSSDEYQFIRYSLLNGASCFRCRVWCRLPVITPCRHL 907

Query: 895  LCIGCVALDSEKCTFPECGNLYKMQSPETLARPENPNPKWPVPQDLIELQPSYKQDDWNP 716
            LC+ CVALDSEKCT P CGN Y+MQSPET ARPENPNPKWPVP+DLIELQPSYKQDDW+P
Sbjct: 908  LCLDCVALDSEKCTLPGCGNHYEMQSPETRARPENPNPKWPVPKDLIELQPSYKQDDWDP 967

Query: 715  NWQXXXXXXXXXXXXXXKNLHQT-----------NMKSHEEQAP-DKVIIFSQFLEHIHV 572
            +WQ              ++L +T           N  S++ QA  DKVIIFSQFLEHIHV
Sbjct: 968  DWQSTSSSKVAYLIEKLRSLRETGNNITDSVGHANTLSYQPQAVLDKVIIFSQFLEHIHV 1027

Query: 571  IEEQLKVADIQFVGMYSPMHSIHKIKALETFQHDRHCMALVMDGSTALGLDLSFVTHVYL 392
            I++QL +A I + GMYSPM    K  AL  FQ D  CMALVMDG+ ALGLDLSFVTHV+L
Sbjct: 1028 IQQQLTIAGIIYAGMYSPMPLASKRSALMKFQEDPTCMALVMDGTAALGLDLSFVTHVFL 1087

Query: 391  MKPIWDKSIEEQVISRAHRMGATQPIHVETLAMSGTIEEQMLRFLQDADECKKLMKE--- 221
            M+PIWD+S+EEQVISRAHRMGAT+PIHVETLAM GT+EEQMLR LQD+  C+K++ +   
Sbjct: 1088 MEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLRLLQDSSACRKIVNKGTG 1147

Query: 220  --DQDCVRPCRSVHDFAESNYLSQLSFV 143
              D +  R  RS+HDFAES+YL QLS V
Sbjct: 1148 STDNEGGRSHRSLHDFAESSYLLQLSSV 1175


>ref|XP_002877979.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata]
            gi|297323817|gb|EFH54238.1| SNF2 domain-containing
            protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1370

 Score =  407 bits (1045), Expect = e-111
 Identities = 207/351 (58%), Positives = 249/351 (70%), Gaps = 39/351 (11%)
 Frame = -3

Query: 1075 IRVTEAGNDIQETMDELVQKGLEPGSEEYVLLRDKLHLGTSCMRCKAWCRLPVITPCRHL 896
            I++T+AG+DI+ETMD L++ GL+  +EEY  ++D L  G +C RC  WCRLPVITPCRHL
Sbjct: 999  IKMTDAGHDIKETMDALLENGLDLSTEEYSFIQDSLIGGCNCKRCGEWCRLPVITPCRHL 1058

Query: 895  LCIGCVALDSEKCTFPECGNLYKMQSPETLARPENPNPKWPVPQDLIELQPSYKQDDWNP 716
            LC+ CVALDSE+CT P CG LY+MQ+PETLARPENPNPKWPVP+DLIELQPSYKQDDWNP
Sbjct: 1059 LCLDCVALDSERCTIPGCGYLYEMQTPETLARPENPNPKWPVPKDLIELQPSYKQDDWNP 1118

Query: 715  NWQXXXXXXXXXXXXXXKNLHQTNMKS----------HEEQAP----------------- 617
            +WQ              + L + N KS          + E  P                 
Sbjct: 1119 DWQSTSSSKVSYLVDRLRKLREGNRKSILSFNKTDNDNLEDNPAGTSGTFLGKESHGQDC 1178

Query: 616  -------DKVIIFSQFLEHIHVIEEQLKVADIQFVGMYSPMHSIHKIKALETFQHDRHCM 458
                   DKV+IFSQFLEHIHVIE+QL  A I+F  MYSPMHS +K+K+L  FQ+D  CM
Sbjct: 1179 GSQMVFVDKVLIFSQFLEHIHVIEQQLTTAGIKFGKMYSPMHSCNKMKSLAMFQNDADCM 1238

Query: 457  ALVMDGSTALGLDLSFVTHVYLMKPIWDKSIEEQVISRAHRMGATQPIHVETLAMSGTIE 278
            AL+MDGS ALGLDLSFVTHV+LM+PIWDKS+EEQVISRAHRMGA +PI VETL M GTIE
Sbjct: 1239 ALLMDGSAALGLDLSFVTHVFLMEPIWDKSLEEQVISRAHRMGAKRPIFVETLTMCGTIE 1298

Query: 277  EQMLRFLQDADECKKLMKED-----QDCVRPCRSVHDFAESNYLSQLSFVR 140
            EQM+RFL+DA++  +L+  D     Q+  R  R++HD AESNYLS LSFVR
Sbjct: 1299 EQMMRFLEDAEKSDRLLSGDYIEAKQETTRSRRTLHDLAESNYLSHLSFVR 1349


>ref|NP_680129.1| F-box protein [Arabidopsis thaliana]
            gi|75181828|sp|Q9M1I1.1|FB304_ARATH RecName: Full=F-box
            protein At3g54460 gi|7258349|emb|CAB77566.1| RING
            finger-like protein [Arabidopsis thaliana]
            gi|20259494|gb|AAM13867.1| unknown protein [Arabidopsis
            thaliana] gi|28393845|gb|AAO42330.1| unknown protein
            [Arabidopsis thaliana] gi|110742559|dbj|BAE99194.1| RING
            finger -like protein [Arabidopsis thaliana]
            gi|332645713|gb|AEE79234.1| F-box protein [Arabidopsis
            thaliana]
          Length = 1378

 Score =  400 bits (1027), Expect = e-109
 Identities = 205/351 (58%), Positives = 246/351 (70%), Gaps = 39/351 (11%)
 Frame = -3

Query: 1075 IRVTEAGNDIQETMDELVQKGLEPGSEEYVLLRDKLHLGTSCMRCKAWCRLPVITPCRHL 896
            I++T+AG+DI+ETMD L++  L+  +EEY  ++D L  G +C RC  WCRLPVITPCRHL
Sbjct: 1007 IKMTDAGHDIKETMDALLENDLDLWTEEYSFIQDSLIGGCNCKRCGEWCRLPVITPCRHL 1066

Query: 895  LCIGCVALDSEKCTFPECGNLYKMQSPETLARPENPNPKWPVPQDLIELQPSYKQDDWNP 716
            LC+ CVALDSE+CT   CG LY+MQ+PETLARPENPNPKWPVP+DLIELQPSYKQDDWNP
Sbjct: 1067 LCLDCVALDSERCTISGCGYLYEMQTPETLARPENPNPKWPVPKDLIELQPSYKQDDWNP 1126

Query: 715  NWQXXXXXXXXXXXXXXKNLHQTNMKSH-----------EEQAP---------------- 617
            +WQ              + LH+ N KS            E+  P                
Sbjct: 1127 DWQSTSSSKVSYLVDRLRKLHEGNKKSILSFNKTDNDNLEDNPPGTSEAFLGKELHGQDC 1186

Query: 616  -------DKVIIFSQFLEHIHVIEEQLKVADIQFVGMYSPMHSIHKIKALETFQHDRHCM 458
                   DKV+IFSQFLEHIHVIE+QL  A I+F  MYSPM S +K+KAL  FQ+D  CM
Sbjct: 1187 GSQMVFVDKVLIFSQFLEHIHVIEQQLTTAGIKFGKMYSPMQSYNKMKALAMFQNDADCM 1246

Query: 457  ALVMDGSTALGLDLSFVTHVYLMKPIWDKSIEEQVISRAHRMGATQPIHVETLAMSGTIE 278
            AL+MDGS ALGLDLSFVTHV+LM+PIWDKS+EEQVISRAHRMGA +PI VETL M GTIE
Sbjct: 1247 ALLMDGSGALGLDLSFVTHVFLMEPIWDKSLEEQVISRAHRMGAKRPIFVETLTMRGTIE 1306

Query: 277  EQMLRFLQDADECKKLMKED-----QDCVRPCRSVHDFAESNYLSQLSFVR 140
            EQM+RFL+DA++  +L+  D     Q+  R  R++HD  ESNYLS LSFVR
Sbjct: 1307 EQMMRFLEDAEKSDRLLSGDYIEAKQETTRSRRTLHDLVESNYLSHLSFVR 1357