BLASTX nr result

ID: Lithospermum22_contig00003457 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00003457
         (591 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302124.1| predicted protein [Populus trichocarpa] gi|2...    75   6e-12
ref|XP_002306764.1| predicted protein [Populus trichocarpa] gi|2...    65   9e-09
ref|XP_004149520.1| PREDICTED: transcription factor PIF5-like [C...    56   4e-06
emb|CBI22065.3| unnamed protein product [Vitis vinifera]               55   9e-06

>ref|XP_002302124.1| predicted protein [Populus trichocarpa] gi|222843850|gb|EEE81397.1|
           predicted protein [Populus trichocarpa]
          Length = 233

 Score = 75.5 bits (184), Expect = 6e-12
 Identities = 47/110 (42%), Positives = 60/110 (54%), Gaps = 5/110 (4%)
 Frame = -1

Query: 570 HLTRMPMLDQTMASPIHPTPNQAVLP-----NPINYPNQFNTPNFSDQYAAFLGFQQLQN 406
           HL R+P++DQ+++  + PT NQAV+      NP+NY NQ   P FSDQYA F+GF  +Q 
Sbjct: 130 HLPRVPLVDQSIS--MTPTQNQAVICQTPVLNPVNYQNQMQNPTFSDQYARFMGF-HMQA 186

Query: 405 AMQXXXXXXXXXXXXXXXXXXQPMNMFNFGSHAAAQQNSNIAPPSHCNGP 256
           A                    QPMNMF FGS    QQN  +APP+   GP
Sbjct: 187 A-------------------SQPMNMFRFGSQ-TVQQNQMMAPPNSGGGP 216


>ref|XP_002306764.1| predicted protein [Populus trichocarpa] gi|222856213|gb|EEE93760.1|
           predicted protein [Populus trichocarpa]
          Length = 380

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 43/110 (39%), Positives = 57/110 (51%), Gaps = 5/110 (4%)
 Frame = -1

Query: 570 HLTRMPMLDQTMASPIHPTPN-----QAVLPNPINYPNQFNTPNFSDQYAAFLGFQQLQN 406
           HL R+ ++DQ+++  + PT N     QA + NP+N+ NQ   P F+DQYA F+GF  +Q 
Sbjct: 277 HLPRVQLIDQSIS--MAPTQNSGVMCQAPVLNPVNFHNQMQNPAFADQYARFMGF-HMQA 333

Query: 405 AMQXXXXXXXXXXXXXXXXXXQPMNMFNFGSHAAAQQNSNIAPPSHCNGP 256
           A                    QPMNMF FGS    QQN  +AP S   GP
Sbjct: 334 A-------------------SQPMNMFRFGSQ-TVQQNQMMAPTSSVGGP 363


>ref|XP_004149520.1| PREDICTED: transcription factor PIF5-like [Cucumis sativus]
           gi|449505798|ref|XP_004162571.1| PREDICTED:
           transcription factor PIF5-like [Cucumis sativus]
          Length = 550

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 38/119 (31%), Positives = 57/119 (47%), Gaps = 5/119 (4%)
 Frame = -1

Query: 591 HNSMHQQHLTRMPMLDQTMASPIHPTPNQAVLP-----NPINYPNQFNTPNFSDQYAAFL 427
           HN M    L R+P++DQ+++  + PTPNQ ++      NP+NY NQ   P   +QYA  +
Sbjct: 443 HNPMQ---LPRVPIVDQSVS--VAPTPNQPMMCQPQMFNPMNYQNQMQNPALQEQYARLM 497

Query: 426 GFQQLQNAMQXXXXXXXXXXXXXXXXXXQPMNMFNFGSHAAAQQNSNIAPPSHCNGPSA 250
           GF  +Q                      QP+N+F F   +A  Q+   A P   +GP+A
Sbjct: 498 GFHHMQ-------------------PTSQPINVFRF-CPSAVLQSQPAAAPGPASGPTA 536


>emb|CBI22065.3| unnamed protein product [Vitis vinifera]
          Length = 544

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 39/114 (34%), Positives = 52/114 (45%), Gaps = 3/114 (2%)
 Frame = -1

Query: 591 HNSMHQQHLTRMPMLDQ-TMASPIHPTPNQAVLP--NPINYPNQFNTPNFSDQYAAFLGF 421
           HN MH   L R+ ++DQ T A P    P     P  NP+NY NQ   PNF +Q+A ++GF
Sbjct: 428 HNPMH---LPRVQLVDQSTSAVPPSNQPPICQTPVLNPVNYQNQMPNPNFPEQFAHYMGF 484

Query: 420 QQLQNAMQXXXXXXXXXXXXXXXXXXQPMNMFNFGSHAAAQQNSNIAPPSHCNG 259
             +Q                      QPMN+F+FGS  +    S  A  S+  G
Sbjct: 485 HPMQT-------------------PSQPMNVFSFGSQTSWVNTSGYACCSNAFG 519


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