BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00003272
         (3095 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...   210   e-151
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...   233   e-148
gb|AAD21778.1| putative non-LTR retroelement reverse transcripta...   224   e-147
gb|AAD20714.1| putative non-LTR retroelement reverse transcripta...   212   e-144
gb|AAD24831.1| putative non-LTR retroelement reverse transcripta...   212   e-144

>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1374

 Score =  210 bits (535), Expect(4) = e-151
 Identities = 121/406 (29%), Positives = 198/406 (48%), Gaps = 23/406 (5%)
 Frame = -1

Query: 1376 LGMNEVLYQGKYLGLPYQIGR*KREVFSFLTRKVEDRLRGWKGKVLSQSGK*ILIKSVTS 1197
            LG+     +G YLGLP      K    S+L  ++  ++ GW+   LS  GK IL+K+V  
Sbjct: 739  LGIEREGGEGVYLGLPESFQGSKVATLSYLKDRLGKKVLGWQSNFLSPGGKEILLKAVAM 798

Query: 1196 AIPNFLMNCFKLPFGISDNLNSSMAKF*WGTGDGDIGIHWRSSDKHCDDKLEGGVGFKDL 1017
            A+P + M+CFK+P  I   + S MA+F W       G+HW++       K  GG+GFK++
Sbjct: 799  ALPTYTMSCFKIPKTICQQIESVMAEFWWKNKKEGRGLHWKAWCHLSRPKAVGGLGFKEI 858

Query: 1016 ECINMALLVKQGWRSLTNQAPLLFKILKGRYFRRISFLNAKLGANSSF*WGSILEGRKLL 837
            E  N+ALL KQ WR +T +  L+ K+ K RYF +   LNA LG+  SF W SI E + L+
Sbjct: 859  EAFNIALLGKQLWRMITEKDSLMAKVFKSRYFSKSDPLNAPLGSRPSFAWKSIYEAQVLI 918

Query: 836  LKGVRWWFGDGRSIDMWKEPWVPPSTDFFLRGDQGDKPCWVSQLIRRG------------ 693
             +G+R   G+G +I++W +PW+            G KP   +Q ++R             
Sbjct: 919  KQGIRAVIGNGETINVWTDPWI------------GAKPAKAAQAVKRSHLVSQYAANSIH 966

Query: 692  -----------EWIEKAVGNIMEGDDLEKVLSLPLIHRGMEDKLIWNHNLCGHYLTSSGY 546
                       +W    V  +   +  E +L+L    +   D+  W ++  GHY   SGY
Sbjct: 967  VVKDLLLPDGRDWNWNLVSLLFPDNTQENILALRPGGKETRDRFTWEYSRSGHYSVKSGY 1026

Query: 545  KCVCEMKKNGELRGKVKGEGSNRGGDNREWKEVWQL*VLPRVKQFIWKCLYDILPTKAKL 366
              + E+     +  +   +   +   +  ++++W+L V P++  F+W+C+ + L   + L
Sbjct: 1027 WVMTEI-----INQRNNPQEVLQPSLDPIFQQIWKLDVPPKIHHFLWRCVNNCLSVASNL 1081

Query: 365  LKMEVLLD*NCILCKEKDESLTHLLLDCSFSCRVWYISPWTLNTGG 228
                +  + +C+ C    E++ HLL  C F+   W ISP     GG
Sbjct: 1082 AYRHLAREKSCVRCPSHGETVNHLLFKCPFARLTWAISPLPAPPGG 1127



 Score =  208 bits (529), Expect(4) = e-151
 Identities = 101/205 (49%), Positives = 141/205 (68%)
 Frame = -3

Query: 2067 LCNIVAKIIGLIMTNPLRFGLMNIISEAQSAFLPGRIICDNILIAHEVLHYINHSRSIKN 1888
            LCN++ K+IG +M N L+  L ++ISE Q+AF+ GR+I DNILIAHE+LH ++ +     
Sbjct: 509  LCNVIYKVIGKLMANRLKKILPSLISETQAAFVKGRLISDNILIAHELLHALSSNNKCSE 568

Query: 1887 SSMTLKLDTSKAYVRVEWKFLEDIMLKFGFCRTWVDWKMCFISSVSYSFIINGAPRGFIR 1708
              + +K D SKAY RVEW FLE  M   GF   W+   M  + SV Y  +ING P G I 
Sbjct: 569  EFIAIKTDISKAYDRVEWPFLEKAMRGLGFADHWIRLIMECVKSVRYQVLINGTPHGEII 628

Query: 1707 PTRGIRQGDPLSLYLFLLCAEGLTCMLREAEERKVLTGIKISRESPPISHILFADDTMIF 1528
            P+RG+RQGDPLS YLF++C E L  ML+ AE++  +TG+K++R +PPISH+LFADD+M +
Sbjct: 629  PSRGLRQGDPLSPYLFVICTEMLVKMLQSAEQKNQITGLKVARGAPPISHLLFADDSMFY 688

Query: 1527 CKANV*EGIEVIRILGDYEVVSGQK 1453
            CK N     ++IRI+ +Y + SGQ+
Sbjct: 689  CKVNDEALGQIIRIIEEYSLASGQR 713



 Score =  107 bits (268), Expect(4) = e-151
 Identities = 60/214 (28%), Positives = 119/214 (55%), Gaps = 6/214 (2%)
 Frame = -2

Query: 3088 IDFQQVL------DLGFVGHPYTWWNKREGDDLIKSRLDRVLCNPQWSLMFNSATCFYMG 2927
            ++F+Q+L      ++   G+ ++W+  R  D+L++ RLDR + N  W  +F  A   Y+ 
Sbjct: 158  LEFRQMLNSCGLWEVNHSGYQFSWYGNRN-DELVQCRLDRTVANQAWMELFPQAKATYLQ 216

Query: 2926 MIGADHCPIMLNTEVETIKSKRRFVFDSRWVGKEGCEEVIKNAWAKEVSGSRWYQVSEKI 2747
             I +DH P++ N   +  +    F +D RWV +EG ++++ N W+++ + +    + EKI
Sbjct: 217  KICSDHSPLINNLVGDNWRKWAGFKYDKRWVQREGFKDLLCNFWSQQSTKTNALMM-EKI 275

Query: 2746 NNVRMGLIE*CKRNKFNSRIRIDDIQLRLKEAFEFGWTSKEEVRQLEQDLDRAWGEEEVF 2567
             + R  + +  + +K +S +RI ++Q +L  A +     + E+ +L+++L + +  EE F
Sbjct: 276  ASCRREISKWKRVSKPSSAVRIQELQFKLDAATKQIPFDRRELARLKKELSQEYNNEEQF 335

Query: 2566 *GDRAKFKMPKEGDRNTKLFHATTMINRRKKMIR 2465
              ++++    + GDRNTK FHA T   R +  I+
Sbjct: 336  WQEKSRIMWMRNGDRNTKYFHAATKNRRAQNRIQ 369



 Score = 83.6 bits (205), Expect(4) = e-151
 Identities = 47/139 (33%), Positives = 72/139 (51%)
 Frame = -1

Query: 2483 EEENDQGV*QEGPSKVEEEVLRYFENIFSANDVCHPDKTTRTVDHRVTQEMNRQLIRVVT 2304
            +EE  +    E   +V E    YF+ +F++ DV +  +    +   V+ +MN  L+  +T
Sbjct: 373  DEEGREWTSDEDLGRVAEA---YFKKLFASEDVGYTVEELENLTPLVSDQMNNNLLAPIT 429

Query: 2303 SEEVKRDVFEMPADKSPGPDSVTVLLFQSFRHIVSCDIVKAVDNFFFSSKLLKSINHTHI 2124
             EEV+R  F +   K PGPD +   L+Q F   +   I + V  FF S  + + +N T+I
Sbjct: 430  KEEVQRATFSINPHKCPGPDGMNGFLYQQFWETMGDQITEMVQAFFRSGSIEEGMNKTNI 489

Query: 2123 CLIPKKTAPMSMIDFRPIT 2067
            CLIPK      M DFRPI+
Sbjct: 490  CLIPKILKAEKMTDFRPIS 508


>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score =  233 bits (593), Expect(4) = e-148
 Identities = 132/412 (32%), Positives = 214/412 (51%), Gaps = 9/412 (2%)
 Frame = -1

Query: 1460 GKKINRNKCXXXXXXXXXXXXXXXXXSLLGMNEVLYQGKYLGLPYQIGR*KREVFSFLTR 1281
            G++IN +K                   +LG++ +   G YLGLP  +G  K +VFSF+  
Sbjct: 495  GQQINFSKSSIQFGHKVEDSIKADIKLILGIHNLGGMGSYLGLPESLGGSKTKVFSFVRD 554

Query: 1280 KVEDRLRGWKGKVLSQSGK*ILIKSVTSAIPNFLMNCFKLPFGISDNLNSSMAKF*WGTG 1101
            +++ R+ GW  K LS+ GK ++IKSV + +P ++M+CF+LP  I+  L S++AKF W + 
Sbjct: 555  RLQSRINGWSAKFLSKGGKEVMIKSVAATLPRYVMSCFRLPKAITSKLTSAVAKFWWSSN 614

Query: 1100 DGDIGIHWRSSDKHCDDKLEGGVGFKDLECINMALLVKQGWRSLTNQAPLLFKILKGRYF 921
                G+HW + DK C  K +GG+GF++++  N ALL KQ WR +T    L  K+ KGRYF
Sbjct: 615  GDSRGMHWMAWDKLCSSKSDGGLGFRNVDDFNSALLAKQLWRLITAPDSLFAKVFKGRYF 674

Query: 920  RRISFLNAKLGANSSF*WGSILEGRKLLLKGVRWWFGDGRSIDMWKEPWVPPSTDFFLR- 744
            R+ + L++    + S+ W S++  R L+ KG+    G G SI +W +PW+P     F R 
Sbjct: 675  RKSNPLDSIKSYSPSYGWRSMISARSLVYKGLIKRVGSGASISVWNDPWIPAQ---FPRP 731

Query: 743  ----GDQGDKPCWVSQLI--RRGEWIEKAVGNIMEGDDLEKVLSLPLIHRGMEDKLIWNH 582
                G   D    V  LI  R   W    +  + + +D+  + +LP+ +  MED L W+ 
Sbjct: 732  AKYGGSIVDPSLKVKSLIDSRSNFWNIDLLKELFDPEDVPLISALPIGNPNMEDTLGWHF 791

Query: 581  NLCGHYLTSSGYKCVCEMKKNGELRGKVKGEGSNRGGDNREWKE--VWQL*VLPRVKQFI 408
               G+Y   SGY     +  N         EG+   G +    +  +W++   P+++ F+
Sbjct: 792  TKAGNYTVKSGYH-TARLDLN---------EGTTLIGPDLTTLKAYIWKVQCPPKLRHFL 841

Query: 407  WKCLYDILPTKAKLLKMEVLLD*NCILCKEKDESLTHLLLDCSFSCRVWYIS 252
            W+ L   +P    L K  +L D  C+ C   +ES+ H L  C  + ++W +S
Sbjct: 842  WQILSGCVPVSENLRKRGILCDKGCVSCGASEESINHTLFQCHPARQIWALS 893



 Score =  213 bits (543), Expect(4) = e-148
 Identities = 103/205 (50%), Positives = 141/205 (68%)
 Frame = -3

Query: 2067 LCNIVAKIIGLIMTNPLRFGLMNIISEAQSAFLPGRIICDNILIAHEVLHYINHSRSIKN 1888
            LCN+  K+I  I+   L+  L N+ISE QSAF+ GR+I DNILIA E+ H +  + S K+
Sbjct: 293  LCNVGYKVISKILCQRLKTVLPNLISETQSAFVDGRLISDNILIAQEMFHGLRTNSSCKD 352

Query: 1887 SSMTLKLDTSKAYVRVEWKFLEDIMLKFGFCRTWVDWKMCFISSVSYSFIINGAPRGFIR 1708
              M +K D SKAY +VEW F+E ++ K GFC  W+ W M  I++V Y  +ING P+G I 
Sbjct: 353  KFMAIKTDMSKAYDQVEWNFIEALLRKMGFCEKWISWIMWCITTVQYKVLINGQPKGLII 412

Query: 1707 PTRGIRQGDPLSLYLFLLCAEGLTCMLREAEERKVLTGIKISRESPPISHILFADDTMIF 1528
            P RG+RQGDPLS YLF+LC E L   +R+AE + ++TGIK++  SP +SH+LFADD++ F
Sbjct: 413  PERGLRQGDPLSPYLFILCTEVLIANIRKAERQNLITGIKVATPSPAVSHLLFADDSLFF 472

Query: 1527 CKANV*EGIEVIRILGDYEVVSGQK 1453
            CKAN  +   ++ IL  YE VSGQ+
Sbjct: 473  CKANKEQCGIILEILKQYESVSGQQ 497



 Score = 78.6 bits (192), Expect(4) = e-148
 Identities = 49/153 (32%), Positives = 76/153 (49%)
 Frame = -2

Query: 2926 MIGADHCPIMLNTEVETIKSKRRFVFDSRWVGKEGCEEVIKNAWAKEVSGSRWYQVSEKI 2747
            M+ +DH P++     +  + K+ F FD RW+GK+G  E I   W  + SG R  Q  EK+
Sbjct: 1    MLASDHSPVIATIADKIPRGKQNFRFDKRWIGKDGLLEAISQGWNLD-SGFREGQFVEKL 59

Query: 2746 NNVRMGLIE*CKRNKFNSRIRIDDIQLRLKEAFEFGWTSKEEVRQLEQDLDRAWGEEEVF 2567
             N R  + +  K      R  I+D++  L  A      S+EE+ +L   L  A+ +EE +
Sbjct: 60   TNCRRAISKWRKSLIPFGRQTIEDLKAELDVAQRDDDRSREEITELTLRLKEAYRDEEQY 119

Query: 2566 *GDRAKFKMPKEGDRNTKLFHATTMINRRKKMI 2468
               +++    K GD N+K FHA T   R +  I
Sbjct: 120  WYQKSRSLWMKLGDNNSKFFHALTKQRRARNRI 152



 Score = 75.1 bits (183), Expect(4) = e-148
 Identities = 41/136 (30%), Positives = 69/136 (50%)
 Frame = -1

Query: 2474 NDQGV*QEGPSKVEEEVLRYFENIFSANDVCHPDKTTRTVDHRVTQEMNRQLIRVVTSEE 2295
            ++ G+       ++   + YF+N+F+  +    D+    V   +T  +N  L    T  E
Sbjct: 157  DENGIWSIEDDDIQNIAVSYFQNLFTTANPQVFDEALGEVQVLITDRINDLLTADATECE 216

Query: 2294 VKRDVFEMPADKSPGPDSVTVLLFQSFRHIVSCDIVKAVDNFFFSSKLLKSINHTHICLI 2115
            V+  +F +  +K+PGPD +T L FQ    I+  D++  V++F       K +N T+ICLI
Sbjct: 217  VRAALFMIHPEKAPGPDGMTALFFQKSWAIIKSDLLSLVNSFLQEGVFDKRLNTTNICLI 276

Query: 2114 PKKTAPMSMIDFRPIT 2067
            PK   P  M + RPI+
Sbjct: 277  PKTERPTRMTELRPIS 292


>gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1715

 Score =  224 bits (571), Expect(4) = e-147
 Identities = 134/403 (33%), Positives = 201/403 (49%), Gaps = 3/403 (0%)
 Frame = -1

Query: 1460 GKKINRNKCXXXXXXXXXXXXXXXXXSLLGMNEVLYQGKYLGLPYQIGR*KREVFSFLTR 1281
            G+KIN  K                   LLG++ V   GKYLGLP Q+GR K E+F ++  
Sbjct: 1073 GQKINYAKSSIIFGQKIPTMRRQRLHRLLGIDNVRGGGKYLGLPEQLGRRKVELFEYIVT 1132

Query: 1280 KVEDRLRGWKGKVLSQSGK*ILIKSVTSAIPNFLMNCFKLPFGISDNLNSSMAKF*WGTG 1101
            KV++R  GW    LS +GK I+IK++  A+P + MNCF LP  I + +NS +  F WG  
Sbjct: 1133 KVKERTEGWAYNYLSPAGKEIVIKAIAMALPVYSMNCFLLPTLICNEINSLITAFWWGKE 1192

Query: 1100 DGDIGIHWRSSDKHCDDKLEGGVGFKDLECINMALLVKQGWRSLTNQAPLLFKILKGRYF 921
            +                  EG +GFKDL   N ALL KQ WR LTN   LL ++ KG Y+
Sbjct: 1193 N------------------EGDLGFKDLHQFNRALLAKQAWRILTNPQSLLARLYKGLYY 1234

Query: 920  RRISFLNAKLGANSSF*WGSILEGRKLLLKGVRWWFGDGRSIDMWKEPWVPPSTDFFLRG 741
               ++L A  G ++S+ W SI EG+ LL +G+R   GDG++  +W++PW+P       RG
Sbjct: 1235 PNTTYLRANKGGHASYGWNSIQEGKLLLQQGLRVRLGDGQTTKIWEDPWLPTLPPRPARG 1294

Query: 740  DQGDKPCWVSQLIR--RGEWIEKAVGNIMEGDDLEKVLSLPLIHRGMEDKLIWNHNLCGH 567
               D+   V+ L R  + EW       ++  +D +   SL L +    D   W +     
Sbjct: 1295 PILDEDMKVADLWRENKREWDPVIFEGVLNPEDQQLAKSLYLSNYAARDSYKWAYTRNTQ 1354

Query: 566  YLTSSGYKCVCEMK-KNGELRGKVKGEGSNRGGDNREWKEVWQL*VLPRVKQFIWKCLYD 390
            Y   SGY     +     E+   ++G+   +       +E+W+L + P++K FIW+CL  
Sbjct: 1355 YTVRSGYWVATHVNLTEEEIINPLEGDVPLK-------QEIWRLKITPKIKHFIWRCLSG 1407

Query: 389  ILPTKAKLLKMEVLLD*NCILCKEKDESLTHLLLDCSFSCRVW 261
             L T  +L    +  D  C  C   DE++ H++  CS++  VW
Sbjct: 1408 ALSTTTQLRNRNIPADPTCQRCCNADETINHIIFTCSYAQVVW 1450



 Score =  199 bits (506), Expect(4) = e-147
 Identities = 101/205 (49%), Positives = 140/205 (68%)
 Frame = -3

Query: 2067 LCNIVAKIIGLIMTNPLRFGLMNIISEAQSAFLPGRIICDNILIAHEVLHYINHSRSIKN 1888
            LC    KII  I+   L+  L ++IS++Q+AF+PG+ I DN+L+AHE+LH +   R  ++
Sbjct: 871  LCTASYKIISKILIKRLKQCLGDVISDSQAAFVPGQNISDNVLVAHELLHSLKSRRECQS 930

Query: 1887 SSMTLKLDTSKAYVRVEWKFLEDIMLKFGFCRTWVDWKMCFISSVSYSFIINGAPRGFIR 1708
              + +K D SKAY RVEW FLE +M++ GF   WV W M  ++SVSY  +ING+P G I 
Sbjct: 931  GYVAVKTDISKAYDRVEWNFLEKVMIQLGFAPRWVKWIMTCVTSVSYEVLINGSPYGKIF 990

Query: 1707 PTRGIRQGDPLSLYLFLLCAEGLTCMLREAEERKVLTGIKISRESPPISHILFADDTMIF 1528
            P+RGIRQGDPLS YLFL CAE L+ MLR+AE  K + G+KI+++   ISH+LFADD++ F
Sbjct: 991  PSRGIRQGDPLSPYLFLFCAEVLSNMLRKAEVNKQIHGMKITKDCLAISHLLFADDSLFF 1050

Query: 1527 CKANV*EGIEVIRILGDYEVVSGQK 1453
            C+A+     ++  I   YE  SGQK
Sbjct: 1051 CRASNQNIEQLALIFKKYEEASGQK 1075



 Score = 92.4 bits (228), Expect(4) = e-147
 Identities = 57/211 (27%), Positives = 112/211 (53%), Gaps = 2/211 (0%)
 Frame = -2

Query: 3091 LIDFQQVLDLGFVGHPYTWWNKREGDDLIKSRLDRVLCNPQWSLMFNSATCFYMGMIGAD 2912
            +I+   + DL   G+PY+W  KR+ ++ I+S LDRV  N  W   F +    ++ + G+D
Sbjct: 525  MINCCNMKDLKSKGNPYSWVGKRQ-NETIESCLDRVFINSDWQASFPAFETEFLPIAGSD 583

Query: 2911 HCPIMLNTEVETIKSKRRFVFDSRWVGKEGCEEVIKNAWAKEVSGSR--WYQVSEKINNV 2738
            H P++++   E    + +F +D R    E   + ++  W +  S S   +Y   EK++  
Sbjct: 584  HAPVIIDIAEEVCTKRGQFRYDRRHFQFEDFVDSVQRGWNRGRSDSHGGYY---EKLHCC 640

Query: 2737 RMGLIE*CKRNKFNSRIRIDDIQLRLKEAFEFGWTSKEEVRQLEQDLDRAWGEEEVF*GD 2558
            R  L +  +R K N+  +I+ ++ R+  A        + + +L QDL++A+ +EE++   
Sbjct: 641  RQELAKWKRRTKTNTAEKIETLKYRVDAAERDHTLPHQTILRLRQDLNQAYRDEELYWHL 700

Query: 2557 RAKFKMPKEGDRNTKLFHATTMINRRKKMIR 2465
            +++ +    GDRNT  F+A+T + + +  I+
Sbjct: 701  KSRNRWMLLGDRNTMFFYASTKLRKSRNRIK 731



 Score = 80.1 bits (196), Expect(4) = e-147
 Identities = 40/117 (34%), Positives = 65/117 (55%)
 Frame = -1

Query: 2417 YFENIFSANDVCHPDKTTRTVDHRVTQEMNRQLIRVVTSEEVKRDVFEMPADKSPGPDSV 2238
            YF ++F+       ++    +  +VT++MN +L++ VT +EV+  VF + AD++PG D  
Sbjct: 754  YFADLFTTTQTSDWEEIISGIAPKVTEQMNHELLQSVTDQEVRDAVFAIGADRAPGFDGF 813

Query: 2237 TVLLFQSFRHIVSCDIVKAVDNFFFSSKLLKSINHTHICLIPKKTAPMSMIDFRPIT 2067
            T   +     ++  D+   V +FF S  +   IN T ICLIPK   P  M D+RPI+
Sbjct: 814  TAAFYHHLWDLIGNDVCLMVRHFFESDVMDNQINQTQICLIPKIIDPKHMSDYRPIS 870


>gb|AAD20714.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1750

 Score =  212 bits (539), Expect(4) = e-144
 Identities = 122/374 (32%), Positives = 192/374 (51%), Gaps = 4/374 (1%)
 Frame = -1

Query: 1349 GKYLGLPYQIGR*KREVFSFLTRKVEDRLRGWKGKVLSQSGK*ILIKSVTSAIPNFLMNC 1170
            GKYLGLP Q GR K+E+F ++  +V+ R   W  + LS +GK I++KSV  A+P + M+C
Sbjct: 1130 GKYLGLPEQFGRKKKEMFEYIIDRVKKRTSTWSARFLSPAGKEIMLKSVALAMPVYAMSC 1189

Query: 1169 FKLPFGISDNLNSSMAKF*WGTGDGDIGIHWRSSDKHCDDKLEGGVGFKDLECINMALLV 990
            FKLP GI   + S +  F W       GI W +  +    K EGG+GF+DL   N ALL 
Sbjct: 1190 FKLPKGIVSEIESLLMNFWWEKASNQRGIPWVAWKRLQYSKKEGGLGFRDLAKFNDALLA 1249

Query: 989  KQGWRSLTNQAPLLFKILKGRYFRRISFLNAKLGANSSF*WGSILEGRKLLLKGVRWWFG 810
            KQ WR +     L  +++K RYF+ +S L+AK+    S+ W S+L+G  LL KG R   G
Sbjct: 1250 KQAWRLIQYPNSLFARVMKARYFKDVSILDAKVRKQQSYGWASLLDGIALLKKGTRHLIG 1309

Query: 809  DGRSIDMWKEPWVPPSTDFFLRGDQGDKPCWVSQLI-RRGE---WIEKAVGNIMEGDDLE 642
            DG++I +  +  V       L  ++  K   ++ L  R+G    W +  +   ++  D  
Sbjct: 1310 DGQNIRIGLDNIVDSHPPRPLNTEETYKEMTINNLFERKGSYYFWDDSKISQFVDQSDHG 1369

Query: 641  KVLSLPLIHRGMEDKLIWNHNLCGHYLTSSGYKCVCEMKKNGELRGKVKGEGSNRGGDNR 462
             +  + L      DK+IWN+N  G Y   SGY  +       +    +       G  + 
Sbjct: 1370 FIHRIYLAKSKKPDKIIWNYNTTGEYTVRSGYWLLTH-----DPSTNIPAINPPHGSIDL 1424

Query: 461  EWKEVWQL*VLPRVKQFIWKCLYDILPTKAKLLKMEVLLD*NCILCKEKDESLTHLLLDC 282
            + + +W L ++P++K F+W+ L   L T  +L    + +D +C  C  ++ES+ H L  C
Sbjct: 1425 KTR-IWNLPIMPKLKHFLWRALSQALATTERLTTRGMRIDPSCPRCHRENESINHALFTC 1483

Query: 281  SFSCRVWYISPWTL 240
             F+   W +S  +L
Sbjct: 1484 PFATMAWRLSDSSL 1497



 Score =  204 bits (518), Expect(4) = e-144
 Identities = 97/205 (47%), Positives = 136/205 (66%)
 Frame = -3

Query: 2067 LCNIVAKIIGLIMTNPLRFGLMNIISEAQSAFLPGRIICDNILIAHEVLHYINHSRSIKN 1888
            LCN++ K+I   + N L+  L +I+S++Q+AF+PGRII DN++IAHEV+H +   + +  
Sbjct: 891  LCNVLYKVISKCLVNRLKSHLNSIVSDSQAAFIPGRIINDNVMIAHEVMHSLKVRKRVSK 950

Query: 1887 SSMTLKLDTSKAYVRVEWKFLEDIMLKFGFCRTWVDWKMCFISSVSYSFIINGAPRGFIR 1708
            + M +K D SKAY RVEW FLE  M  FGFC  W+ W M  + SV YS +ING+P G+I 
Sbjct: 951  TYMAVKTDVSKAYDRVEWDFLETTMRLFGFCNKWIGWIMAAVKSVHYSVLINGSPHGYIT 1010

Query: 1707 PTRGIRQGDPLSLYLFLLCAEGLTCMLREAEERKVLTGIKISRESPPISHILFADDTMIF 1528
            PTRGIRQGDPLS YLF+LC + L+ ++        L G++I   +P I+H+ FADD++ F
Sbjct: 1011 PTRGIRQGDPLSPYLFILCGDILSHLINGRASSGDLRGVRIGNGAPAITHLQFADDSLFF 1070

Query: 1527 CKANV*EGIEVIRILGDYEVVSGQK 1453
            C+ANV     +  +   YE  SGQK
Sbjct: 1071 CQANVRNCQALKDVFDVYEYYSGQK 1095



 Score = 85.1 bits (209), Expect(4) = e-144
 Identities = 51/200 (25%), Positives = 100/200 (50%), Gaps = 1/200 (0%)
 Frame = -2

Query: 3091 LIDFQQVLDLGFVGHPYTWWNKREGDDLIKSRLDRVLCNPQWSLMFNSATCFYMGMIGAD 2912
            ++    + D+   G  ++W  +R     +K  LDRV  N  W+  F  A   ++   G+D
Sbjct: 544  MVSHCDIEDMRSKGDRFSWVGERH-THTVKCCLDRVFINSAWTATFPYAEIEFLDFTGSD 602

Query: 2911 HCPIMLNTEVETIKSKRRFVFDSRWVGKEGCEEVIKNAWAKEVSGSRWYQVSEKINNVRM 2732
            H P++++      +  + F FD+R +     + +++ +W +    SR   ++E+I++ R 
Sbjct: 603  HKPVLVHFNESFPRRSKLFRFDNRLIDIPTFKRIVQTSW-RTNRNSRSTPITERISSCRQ 661

Query: 2731 GLIE*CKRNKFNSRIRIDDIQLRLKEAFE-FGWTSKEEVRQLEQDLDRAWGEEEVF*GDR 2555
             +      +  NS  RI  +Q  L  A E      ++ + QL++ L +A+ +EE++   +
Sbjct: 662  AMARLKHASNLNSEQRIKKLQSSLNRAMESTRRVDRQLIPQLQESLAKAFSDEEIYWKQK 721

Query: 2554 AKFKMPKEGDRNTKLFHATT 2495
            ++ +  KEGD+NT  FHA T
Sbjct: 722  SRNQWMKEGDQNTGYFHACT 741



 Score = 82.8 bits (203), Expect(4) = e-144
 Identities = 45/135 (33%), Positives = 71/135 (52%)
 Frame = -1

Query: 2474 NDQGV*QEGPSKVEEEVLRYFENIFSANDVCHPDKTTRTVDHRVTQEMNRQLIRVVTSEE 2295
            +DQG    G  ++      +F NIFS N +             VT  +N  L +  +  E
Sbjct: 755  DDQGRMFTGDKEIGNHAQDFFTNIFSTNGIKVSPIDFADFKSTVTNTVNLDLTKEFSDTE 814

Query: 2294 VKRDVFEMPADKSPGPDSVTVLLFQSFRHIVSCDIVKAVDNFFFSSKLLKSINHTHICLI 2115
            +   + ++  DK+PGPD +T   +++   IV  D++  V  FF +S +  SINHT+IC+I
Sbjct: 815  IYDAICQIGDDKAPGPDGLTARFYKNCWDIVGYDVILEVKKFFETSFMKPSINHTNICMI 874

Query: 2114 PKKTAPMSMIDFRPI 2070
            PK T P ++ D+RPI
Sbjct: 875  PKITNPTTLSDYRPI 889


>gb|AAD24831.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1524

 Score =  212 bits (539), Expect(4) = e-144
 Identities = 122/374 (32%), Positives = 192/374 (51%), Gaps = 4/374 (1%)
 Frame = -1

Query: 1349 GKYLGLPYQIGR*KREVFSFLTRKVEDRLRGWKGKVLSQSGK*ILIKSVTSAIPNFLMNC 1170
            GKYLGLP Q GR K+E+F ++  +V+ R   W  + LS +GK I++KSV  A+P + M+C
Sbjct: 904  GKYLGLPEQFGRKKKEMFEYIIDRVKKRTSTWSARFLSPAGKEIMLKSVALAMPVYAMSC 963

Query: 1169 FKLPFGISDNLNSSMAKF*WGTGDGDIGIHWRSSDKHCDDKLEGGVGFKDLECINMALLV 990
            FKLP GI   + S +  F W       GI W +  +    K EGG+GF+DL   N ALL 
Sbjct: 964  FKLPKGIVSEIESLLMNFWWEKASNQRGIPWVAWKRLQYSKKEGGLGFRDLAKFNDALLA 1023

Query: 989  KQGWRSLTNQAPLLFKILKGRYFRRISFLNAKLGANSSF*WGSILEGRKLLLKGVRWWFG 810
            KQ WR +     L  +++K RYF+ +S L+AK+    S+ W S+L+G  LL KG R   G
Sbjct: 1024 KQAWRLIQYPNSLFARVMKARYFKDVSILDAKVRKQQSYGWASLLDGIALLKKGTRHLIG 1083

Query: 809  DGRSIDMWKEPWVPPSTDFFLRGDQGDKPCWVSQLI-RRGE---WIEKAVGNIMEGDDLE 642
            DG++I +  +  V       L  ++  K   ++ L  R+G    W +  +   ++  D  
Sbjct: 1084 DGQNIRIGLDNIVDSHPPRPLNTEETYKEMTINNLFERKGSYYFWDDSKISQFVDQSDHG 1143

Query: 641  KVLSLPLIHRGMEDKLIWNHNLCGHYLTSSGYKCVCEMKKNGELRGKVKGEGSNRGGDNR 462
             +  + L      DK+IWN+N  G Y   SGY  +       +    +       G  + 
Sbjct: 1144 FIHRIYLAKSKKPDKIIWNYNTTGEYTVRSGYWLLTH-----DPSTNIPAINPPHGSIDL 1198

Query: 461  EWKEVWQL*VLPRVKQFIWKCLYDILPTKAKLLKMEVLLD*NCILCKEKDESLTHLLLDC 282
            + + +W L ++P++K F+W+ L   L T  +L    + +D  C  C  ++ES+ H L  C
Sbjct: 1199 KTR-IWNLPIMPKLKHFLWRALSQALATTERLTTRGMRIDPICPRCHRENESINHALFTC 1257

Query: 281  SFSCRVWYISPWTL 240
             F+   W++S  +L
Sbjct: 1258 PFATMAWWLSDSSL 1271



 Score =  204 bits (518), Expect(4) = e-144
 Identities = 97/205 (47%), Positives = 136/205 (66%)
 Frame = -3

Query: 2067 LCNIVAKIIGLIMTNPLRFGLMNIISEAQSAFLPGRIICDNILIAHEVLHYINHSRSIKN 1888
            LCN++ K+I   + N L+  L +I+S++Q+AF+PGRII DN++IAHEV+H +   + +  
Sbjct: 665  LCNVLYKVISKCLVNRLKSHLNSIVSDSQAAFIPGRIINDNVMIAHEVMHSLKVRKRVSK 724

Query: 1887 SSMTLKLDTSKAYVRVEWKFLEDIMLKFGFCRTWVDWKMCFISSVSYSFIINGAPRGFIR 1708
            + M +K D SKAY RVEW FLE  M  FGFC  W+ W M  + SV YS +ING+P G+I 
Sbjct: 725  TYMAVKTDVSKAYDRVEWDFLETTMRLFGFCNKWIGWIMAAVKSVHYSVLINGSPHGYIT 784

Query: 1707 PTRGIRQGDPLSLYLFLLCAEGLTCMLREAEERKVLTGIKISRESPPISHILFADDTMIF 1528
            PTRGIRQGDPLS YLF+LC + L+ ++        L G++I   +P I+H+ FADD++ F
Sbjct: 785  PTRGIRQGDPLSPYLFILCGDILSHLINGRASSGDLRGVRIGNGAPAITHLQFADDSLFF 844

Query: 1527 CKANV*EGIEVIRILGDYEVVSGQK 1453
            C+ANV     +  +   YE  SGQK
Sbjct: 845  CQANVRNCQALKDVFDVYEYYSGQK 869



 Score = 85.1 bits (209), Expect(4) = e-144
 Identities = 51/200 (25%), Positives = 100/200 (50%), Gaps = 1/200 (0%)
 Frame = -2

Query: 3091 LIDFQQVLDLGFVGHPYTWWNKREGDDLIKSRLDRVLCNPQWSLMFNSATCFYMGMIGAD 2912
            ++    + D+   G  ++W  +R     +K  LDRV  N  W+  F  A   ++   G+D
Sbjct: 318  MVSHCDIEDMRSKGDRFSWVGERH-THTVKCCLDRVFINSAWTATFPYAETEFLDFTGSD 376

Query: 2911 HCPIMLNTEVETIKSKRRFVFDSRWVGKEGCEEVIKNAWAKEVSGSRWYQVSEKINNVRM 2732
            H P++++      +  + F FD+R +     + +++ +W +    SR   ++E+I++ R 
Sbjct: 377  HKPVLVHFNESFPRRSKLFRFDNRLIDIPTFKRIVQTSW-RTNRNSRSTPITERISSCRQ 435

Query: 2731 GLIE*CKRNKFNSRIRIDDIQLRLKEAFE-FGWTSKEEVRQLEQDLDRAWGEEEVF*GDR 2555
             +      +  NS  RI  +Q  L  A E      ++ + QL++ L +A+ +EE++   +
Sbjct: 436  AMARLKHASNLNSEQRIKKLQSSLNRAMESTRRVDRQLIPQLQESLAKAFSDEEIYWKQK 495

Query: 2554 AKFKMPKEGDRNTKLFHATT 2495
            ++ +  KEGD+NT  FHA T
Sbjct: 496  SRNQWMKEGDQNTGYFHACT 515



 Score = 82.8 bits (203), Expect(4) = e-144
 Identities = 45/135 (33%), Positives = 71/135 (52%)
 Frame = -1

Query: 2474 NDQGV*QEGPSKVEEEVLRYFENIFSANDVCHPDKTTRTVDHRVTQEMNRQLIRVVTSEE 2295
            +DQG    G  ++      +F NIFS N +             VT  +N  L +  +  E
Sbjct: 529  DDQGRMFTGDKEIGNHAQDFFTNIFSTNGIKVSPIDFADFKSTVTNTVNLDLTKEFSDTE 588

Query: 2294 VKRDVFEMPADKSPGPDSVTVLLFQSFRHIVSCDIVKAVDNFFFSSKLLKSINHTHICLI 2115
            +   + ++  DK+PGPD +T   +++   IV  D++  V  FF +S +  SINHT+IC+I
Sbjct: 589  IYDAICQIGDDKAPGPDGLTARFYKNCWDIVGYDVILEVKKFFETSFMKPSINHTNICMI 648

Query: 2114 PKKTAPMSMIDFRPI 2070
            PK T P ++ D+RPI
Sbjct: 649  PKITNPTTLSDYRPI 663