BLASTX nr result

ID: Lithospermum22_contig00003221 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00003221
         (860 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEX00356.1| IAA13 [Solanum lycopersicum]                           219   5e-55
gb|ABK94046.1| unknown [Populus trichocarpa]                          195   1e-47
ref|XP_002314509.1| predicted protein [Populus trichocarpa] gi|2...   188   1e-45
ref|XP_002311698.1| predicted protein [Populus trichocarpa] gi|2...   184   3e-44
gb|ADL36583.1| ARF domain class transcription factor [Malus x do...   183   5e-44

>gb|AEX00356.1| IAA13 [Solanum lycopersicum]
          Length = 283

 Score =  219 bits (559), Expect = 5e-55
 Identities = 122/199 (61%), Positives = 142/199 (71%), Gaps = 9/199 (4%)
 Frame = -1

Query: 572 KSAWSEHGRILTAKDLSNGFPSRGNI---FSGTKRHAD---TSAEVGSPPSNGVSQVVGW 411
           KS W E+GRILTAKD  NGF ++ +I    SGTKR AD   ++ EVGSPP+   SQVVGW
Sbjct: 51  KSPWGEYGRILTAKDFPNGFSAKRSINVGVSGTKRAADFAGSTTEVGSPPTGASSQVVGW 110

Query: 410 PPIRTYRMNNLVNQTRVTNVEAGKGVGRXXXXXXXXXXXXNHGNHNDDA---KETGRLGF 240
           PPIR YRMN+LVNQ++V N +  KGVG             NHGN  DDA   KE G LGF
Sbjct: 111 PPIRAYRMNSLVNQSKVLNADDEKGVG-GNDKKEHSKKKINHGNTKDDAASVKEKGHLGF 169

Query: 239 VKVNVNGLPIGRKVDVNAYSCYESLAKTLEEMFFKSSTIFGSLGYGKEILKKQWKLLDGS 60
           VKVN++GLPIGRKVD+NA++CYESLA+TLE+MFFKS+         KE   K +KLLDGS
Sbjct: 170 VKVNMDGLPIGRKVDLNAHTCYESLAETLEDMFFKSTK-----SGEKEQATKSFKLLDGS 224

Query: 59  SEFALTYEDKEGDWMLVGD 3
           SEF LTYEDKEGDWMLVGD
Sbjct: 225 SEFVLTYEDKEGDWMLVGD 243


>gb|ABK94046.1| unknown [Populus trichocarpa]
          Length = 303

 Score =  195 bits (495), Expect = 1e-47
 Identities = 109/204 (53%), Positives = 133/204 (65%), Gaps = 15/204 (7%)
 Frame = -1

Query: 569 SAWSEHGRILTAKDL------------SNGFPSRGNI--FSGTKRHADTSAEVGSPPSNG 432
           +AW E GRILTAKD             +N  PS   +   SGTKR AD+ +  G  P+ G
Sbjct: 62  NAWGECGRILTAKDFPSVVSQPQRPNNNNSMPSTCVVGAVSGTKRAADSVSHEGGSPTAG 121

Query: 431 VSQVVGWPPIRTYRMNNLVNQTRVTNVEAGKGVGRXXXXXXXXXXXXNHGNH-NDDAKET 255
            SQVVGWPPIR YRMN+LV+Q +    E  KG+G              +GN  N    E 
Sbjct: 122 -SQVVGWPPIRAYRMNSLVSQAKAARAEEDKGIGEKDKSKENLKKKICNGNKTNATGNEK 180

Query: 254 GRLGFVKVNVNGLPIGRKVDVNAYSCYESLAKTLEEMFFKSSTIFGSLGYGKEILKKQWK 75
           G LGFVKVN++G+PIGRKVD+NA++CYE+LA+ LEEMFF+S+T   S+G G++ L K  K
Sbjct: 181 GHLGFVKVNMDGVPIGRKVDLNAHACYETLAQALEEMFFRSTTTINSIG-GQKPLSKFSK 239

Query: 74  LLDGSSEFALTYEDKEGDWMLVGD 3
           LLDGSSEF LTYEDKEGDWMLVGD
Sbjct: 240 LLDGSSEFVLTYEDKEGDWMLVGD 263


>ref|XP_002314509.1| predicted protein [Populus trichocarpa] gi|222863549|gb|EEF00680.1|
           predicted protein [Populus trichocarpa]
          Length = 276

 Score =  188 bits (478), Expect = 1e-45
 Identities = 105/190 (55%), Positives = 127/190 (66%), Gaps = 1/190 (0%)
 Frame = -1

Query: 569 SAWSEHGRILTAKDLSNGFPSRGNIFSGTKRHADTSAEVGSPPSNGVSQVVGWPPIRTYR 390
           +AW E GRILTAKD    FPS         R AD+ +  G  P+ G SQVVGWPPIR YR
Sbjct: 61  NAWGECGRILTAKD----FPS--------VRAADSVSHEGGSPTAG-SQVVGWPPIRAYR 107

Query: 389 MNNLVNQTRVTNVEAGKGVGRXXXXXXXXXXXXNHGNH-NDDAKETGRLGFVKVNVNGLP 213
           MN+LV+Q +    E  KG+G              +GN  N    E G LGFVKVN++G+P
Sbjct: 108 MNSLVSQAKAARAEEEKGIGEKDKSKENLKKKICNGNKTNATGNEKGHLGFVKVNMDGVP 167

Query: 212 IGRKVDVNAYSCYESLAKTLEEMFFKSSTIFGSLGYGKEILKKQWKLLDGSSEFALTYED 33
           IGRKVD+NA++CYE+LA+ LEEMFF+S+T   S+G G++ L K  KLLDGSSEF LTYED
Sbjct: 168 IGRKVDLNAHACYETLAQALEEMFFRSTTTINSIG-GQKPLSKFSKLLDGSSEFVLTYED 226

Query: 32  KEGDWMLVGD 3
           KEGDWMLVGD
Sbjct: 227 KEGDWMLVGD 236


>ref|XP_002311698.1| predicted protein [Populus trichocarpa] gi|222851518|gb|EEE89065.1|
           predicted protein [Populus trichocarpa]
          Length = 258

 Score =  184 bits (466), Expect = 3e-44
 Identities = 102/190 (53%), Positives = 123/190 (64%), Gaps = 1/190 (0%)
 Frame = -1

Query: 569 SAWSEHGRILTAKDLSNGFPSRGNIFSGTKRHADTSAEVGSPPSNGVSQVVGWPPIRTYR 390
           +A  E GRILTAKD    FPS         R AD+ +  G  P+ G SQVVGWPPIR YR
Sbjct: 42  NARGERGRILTAKD----FPS--------VRAADSVSHEGGSPTAG-SQVVGWPPIRAYR 88

Query: 389 MNNLVNQTRVTNVEAGKGVGRXXXXXXXXXXXXNHGNHND-DAKETGRLGFVKVNVNGLP 213
           MN+LVNQ +    E  KG+G              +GN     + E G LGFVKVN++G+P
Sbjct: 89  MNSLVNQAKAARAEEDKGIGEKDISKDNLKKKICNGNKTSAPSNEKGHLGFVKVNMDGIP 148

Query: 212 IGRKVDVNAYSCYESLAKTLEEMFFKSSTIFGSLGYGKEILKKQWKLLDGSSEFALTYED 33
           IGRKVD+NA++CYE+LA+ LEEMFF+S+T   S+G  K  + K  KLLDG SEF LTYED
Sbjct: 149 IGRKVDLNAHACYETLAQALEEMFFRSATTINSIGGEKRQVTKPSKLLDGLSEFLLTYED 208

Query: 32  KEGDWMLVGD 3
           KEGDWMLVGD
Sbjct: 209 KEGDWMLVGD 218


>gb|ADL36583.1| ARF domain class transcription factor [Malus x domestica]
          Length = 306

 Score =  183 bits (464), Expect = 5e-44
 Identities = 112/243 (46%), Positives = 135/243 (55%), Gaps = 17/243 (6%)
 Frame = -1

Query: 680 MEKDFMGMSRESLMNYXXXXXXXXXXXXXXXXXXXTKSAWSEHGRILTAKDLSNGFPSRG 501
           +E+D++GMS E+  +Y                      AW E GRILTAKDL +   SRG
Sbjct: 32  VEQDYVGMSSEAT-SYPAEAELELGLSLGGGGKLSNPCAWGERGRILTAKDLPSMVVSRG 90

Query: 500 N-----------------IFSGTKRHADTSAEVGSPPSNGVSQVVGWPPIRTYRMNNLVN 372
                               SGTKR AD++ + G  P+  VSQVVGWPPI   RMN+LVN
Sbjct: 91  ASSAASRFSHRPNASAAVAVSGTKRAADSAPQEGGSPT-AVSQVVGWPPISAARMNSLVN 149

Query: 371 QTRVTNVEAGKGVGRXXXXXXXXXXXXNHGNHNDDAKETGRLGFVKVNVNGLPIGRKVDV 192
           Q +    E    VG                      KE G LGFVKVN++G+PIGRKVD+
Sbjct: 150 QAKTARAEDDTAVGEKSKDTSKKKINV---GSKTTVKEKGHLGFVKVNMDGIPIGRKVDL 206

Query: 191 NAYSCYESLAKTLEEMFFKSSTIFGSLGYGKEILKKQWKLLDGSSEFALTYEDKEGDWML 12
           NA+SCYE+LA+TLEEMF   +T   ++G   E  KK  KLLDGSSEF LTYEDKEGDWML
Sbjct: 207 NAHSCYETLAQTLEEMFISPTT---TIGGDTEQAKKPSKLLDGSSEFVLTYEDKEGDWML 263

Query: 11  VGD 3
           VGD
Sbjct: 264 VGD 266


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