BLASTX nr result

ID: Lithospermum22_contig00003150 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00003150
         (865 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAI49996.1| 42KDa chitin-binding protein [Solanum lycopersic...   100   7e-19
pdb|1ULK|A Chain A, Crystal Structure Of Pokeweed Lectin-C gi|40...    87   5e-15
sp|Q9AYP9.1|LECC_PHYAM RecName: Full=Lectin-C; AltName: Full=PL-...    87   5e-15
dbj|BAL27684.1| lectin [Solanum lycopersicum]                          86   1e-14
dbj|BAG68286.1| chitin-binding lectin precursor [Solanum lycoper...    86   1e-14

>dbj|BAI49996.1| 42KDa chitin-binding protein [Solanum lycopersicum var.
           cerasiforme]
          Length = 312

 Score = 99.8 bits (247), Expect = 7e-19
 Identities = 59/166 (35%), Positives = 76/166 (45%), Gaps = 12/166 (7%)
 Frame = -2

Query: 750 FLLLATTKSQDFPVGSCGDQAG-----GALCAEGFCCSKWGWCGNTSAYCDAENXXXXXX 586
           F+L    K+    V + GD+ G      + C  G CCS WGWCG TS YC +        
Sbjct: 30  FVLEGINKNASGGVFANGDECGMQANHRSKCPSGMCCSIWGWCGTTSEYCGS-------- 81

Query: 585 XXXXXXXXXQGELP---CGVQHGGATCPPTMCCTIMGYCANSRGPLCSRDLCQSNC-GP- 421
                     G  P   CG+Q GG  CP   CC+++G+C       C  ++CQS C GP 
Sbjct: 82  --GFCQNQCTGPSPHGSCGMQGGGTKCPSGQCCSLLGWCGTG-SDFCKPEICQSQCSGPF 138

Query: 420 --AQCGVDARGAPCVNRIHCCTIGGSCAVYTSPICMPPFCQSQCYF 289
              +CG  A G  C  R  CC++ G C   T+  C    CQSQC F
Sbjct: 139 PNGRCGWQADGRLC-PRGQCCSVDGWCGT-TTDYCASGLCQSQCPF 182



 Score = 94.4 bits (233), Expect = 3e-17
 Identities = 55/162 (33%), Positives = 63/162 (38%), Gaps = 22/162 (13%)
 Frame = -2

Query: 714 PVGSCGDQAGGALCAEGFCCSKWGWCGNTSAYCDAENXXXXXXXXXXXXXXXQGELP--- 544
           P GSCG Q GG  C  G CCS  GWCG  S +C  E                 G  P   
Sbjct: 93  PHGSCGMQGGGTKCPSGQCCSLLGWCGTGSDFCKPE----------ICQSQCSGPFPNGR 142

Query: 543 CGVQHGGATCPPTMCCTIMGYCANSRGPLCSRDLCQSNC-------------------GP 421
           CG Q  G  CP   CC++ G+C  +    C+  LCQS C                     
Sbjct: 143 CGWQADGRLCPRGQCCSVDGWCGTTT-DYCASGLCQSQCPFTPPPPPPPSPPPPSPPPSQ 201

Query: 420 AQCGVDARGAPCVNRIHCCTIGGSCAVYTSPICMPPFCQSQC 295
            QCG+   G  C     CC I G C   T   C P +CQ QC
Sbjct: 202 YQCGMQNGGTKCNRTGECCGISGMCG-NTYEYCFPGYCQMQC 242



 Score = 90.1 bits (222), Expect = 6e-16
 Identities = 58/157 (36%), Positives = 66/157 (42%), Gaps = 13/157 (8%)
 Frame = -2

Query: 726 SQDFPVGSCGDQAGGALCAEGFCCSKWGWCGNTSAYCDAE--------NXXXXXXXXXXX 571
           S  FP G CG QA G LC  G CCS  GWCG T+ YC +                     
Sbjct: 135 SGPFPNGRCGWQADGRLCPRGQCCSVDGWCGTTTDYCASGLCQSQCPFTPPPPPPPSPPP 194

Query: 570 XXXXQGELPCGVQHGGATCPPT-MCCTIMGYCANSRGPLCSRDLCQSNC-GP---AQCGV 406
                 +  CG+Q+GG  C  T  CC I G C N+    C    CQ  C GP    +CG 
Sbjct: 195 PSPPPSQYQCGMQNGGTKCNRTGECCGISGMCGNTY-EYCFPGYCQMQCPGPYPEGRCGW 253

Query: 405 DARGAPCVNRIHCCTIGGSCAVYTSPICMPPFCQSQC 295
            A G  C     CC   G C +     C P FCQSQC
Sbjct: 254 QADGKSCPTG-QCCGNAGWCGIGPG-FCDPIFCQSQC 288


>pdb|1ULK|A Chain A, Crystal Structure Of Pokeweed Lectin-C
           gi|40889777|pdb|1ULK|B Chain B, Crystal Structure Of
           Pokeweed Lectin-C gi|1110548|gb|AAB35257.1| lectin-C,
           PL-C [Phytolacca americana=pokeweeds, roots, Peptide,
           126 aa]
          Length = 126

 Score = 87.0 bits (214), Expect = 5e-15
 Identities = 49/136 (36%), Positives = 63/136 (46%)
 Frame = -2

Query: 702 CGDQAGGALCAEGFCCSKWGWCGNTSAYCDAENXXXXXXXXXXXXXXXQGELPCGVQHGG 523
           CG +A G +C +G+CCS+WG+CG T  YC                        CG + GG
Sbjct: 4   CGVRASGRVCPDGYCCSQWGYCGTTEEYCGKGCQSQCDYNR------------CGKEFGG 51

Query: 522 ATCPPTMCCTIMGYCANSRGPLCSRDLCQSNCGPAQCGVDARGAPCVNRIHCCTIGGSCA 343
             C   +CC+  G+C NS G  C    CQS C   +CG D  G  C   + CC+  G C 
Sbjct: 52  KECHDELCCSQYGWCGNSDGH-CGEG-CQSQCSYWRCGKDFGGRLCTEDM-CCSQYGWCG 108

Query: 342 VYTSPICMPPFCQSQC 295
           + T   C    CQSQC
Sbjct: 109 L-TDDHC-EDGCQSQC 122


>sp|Q9AYP9.1|LECC_PHYAM RecName: Full=Lectin-C; AltName: Full=PL-C; Flags: Precursor
           gi|12657622|dbj|BAB21577.1| lectin-C [Phytolacca
           americana]
          Length = 194

 Score = 87.0 bits (214), Expect = 5e-15
 Identities = 49/136 (36%), Positives = 63/136 (46%)
 Frame = -2

Query: 702 CGDQAGGALCAEGFCCSKWGWCGNTSAYCDAENXXXXXXXXXXXXXXXQGELPCGVQHGG 523
           CG +A G +C +G+CCS+WG+CG T  YC                        CG + GG
Sbjct: 48  CGVRASGRVCPDGYCCSQWGYCGTTEEYCGKGCQSQCDYNR------------CGKEFGG 95

Query: 522 ATCPPTMCCTIMGYCANSRGPLCSRDLCQSNCGPAQCGVDARGAPCVNRIHCCTIGGSCA 343
             C   +CC+  G+C NS G  C    CQS C   +CG D  G  C   + CC+  G C 
Sbjct: 96  KECHDELCCSQYGWCGNSDGH-CGEG-CQSQCSYWRCGKDFGGRLCTEDM-CCSQYGWCG 152

Query: 342 VYTSPICMPPFCQSQC 295
           + T   C    CQSQC
Sbjct: 153 L-TDDHC-EDGCQSQC 166


>dbj|BAL27684.1| lectin [Solanum lycopersicum]
          Length = 365

 Score = 85.9 bits (211), Expect = 1e-14
 Identities = 49/157 (31%), Positives = 61/157 (38%), Gaps = 17/157 (10%)
 Frame = -2

Query: 714 PVGSCGDQAGGALCAEGFCCSKWGWCGNTSAYCDAENXXXXXXXXXXXXXXXQGELP--- 544
           P   CG   GG  C    CCS W WCG T +YC  +N                   P   
Sbjct: 191 PYPRCGMGGGGGKCKSNECCSIWSWCGTTESYCAPQNCQSQCPHTPSPSPPPTPPPPYPR 250

Query: 543 CGVQHGGATCPPTMCCTIMGYCANSRGPLCSRDLCQSNC----GPA----------QCGV 406
           CG+  GG  C    CC+I  +C  +    C+   CQS C     P+          +CG+
Sbjct: 251 CGMGGGGGKCKSNECCSIWSWCGTTES-YCAPQNCQSQCPHTPSPSPPPTPPPPYPRCGM 309

Query: 405 DARGAPCVNRIHCCTIGGSCAVYTSPICMPPFCQSQC 295
              G  C +   CC+I   C   T   C P  CQSQC
Sbjct: 310 GGGGGKCKSN-ECCSIWSWCGT-TESYCAPQNCQSQC 344


>dbj|BAG68286.1| chitin-binding lectin precursor [Solanum lycopersicum var.
           cerasiforme]
          Length = 365

 Score = 85.9 bits (211), Expect = 1e-14
 Identities = 49/157 (31%), Positives = 61/157 (38%), Gaps = 17/157 (10%)
 Frame = -2

Query: 714 PVGSCGDQAGGALCAEGFCCSKWGWCGNTSAYCDAENXXXXXXXXXXXXXXXQGELP--- 544
           P   CG   GG  C    CCS W WCG T +YC  +N                   P   
Sbjct: 191 PYPRCGMGGGGGKCKSNECCSIWSWCGTTESYCAPQNCQSQCPHTPSPSPPPTPPPPYPR 250

Query: 543 CGVQHGGATCPPTMCCTIMGYCANSRGPLCSRDLCQSNC----GPA----------QCGV 406
           CG+  GG  C    CC+I  +C  +    C+   CQS C     P+          +CG+
Sbjct: 251 CGMGGGGGKCKSNECCSIWSWCGTTES-YCAPQNCQSQCPHTPSPSPPPTPPPPYPRCGM 309

Query: 405 DARGAPCVNRIHCCTIGGSCAVYTSPICMPPFCQSQC 295
              G  C +   CC+I   C   T   C P  CQSQC
Sbjct: 310 GGGGGKCKSN-ECCSIWSWCGT-TESYCAPQNCQSQC 344


Top