BLASTX nr result

ID: Lithospermum22_contig00002976 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00002976
         (1696 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521392.1| Heterogeneous nuclear ribonucleoprotein A1, ...   285   3e-74
emb|CBI35964.3| unnamed protein product [Vitis vinifera]              275   3e-71
gb|ACR34605.1| unknown [Zea mays] gi|413926095|gb|AFW66027.1| hy...   273   1e-70
ref|XP_002276110.2| PREDICTED: nucleolin-like [Vitis vinifera]        271   3e-70
dbj|BAJ97842.1| predicted protein [Hordeum vulgare subsp. vulgare]    270   1e-69

>ref|XP_002521392.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
            communis] gi|223539470|gb|EEF41060.1| Heterogeneous
            nuclear ribonucleoprotein A1, putative [Ricinus communis]
          Length = 412

 Score =  285 bits (729), Expect = 3e-74
 Identities = 156/280 (55%), Positives = 192/280 (68%), Gaps = 3/280 (1%)
 Frame = -2

Query: 1557 QSQKSGT*YKKIGEMDYNGAEPTVDIYGDDGPHNQYEDEEDYPQEMYSAQQQHQNYPRRD 1378
            Q+Q+  T ++    +  NG E   D Y DD   +Q    +D+ Q  +       N  R+ 
Sbjct: 7    QAQQRRTQFEDNNIVACNGEEEEEDDYYDDNQQHQ----QDHHQNQHELGGAGGNGRRQS 62

Query: 1377 --YDSNVDDSSARHELKHSIDDSSAGKLFVGGIAWETREEAFTKYFSKYGEISDSVIMMD 1204
              ++   D+SS+         DSS GKLFVGGI+WET EE FT YFSK+GEI+DSVIM D
Sbjct: 63   LTFNQTRDNSSS---------DSSQGKLFVGGISWETTEETFTSYFSKFGEITDSVIMRD 113

Query: 1203 KFSGRPRGFGFVTFADPEVANRVLQEDHVIDGRTVEVKRTVPRGENMQNRGIIRTKKIFV 1024
            + SGRPRGFGFVTFAD   A+RVL+EDH+ID R VEVKRTVPR E M+ +G++R +KIFV
Sbjct: 114  RHSGRPRGFGFVTFADLAAADRVLEEDHIIDDRAVEVKRTVPR-EEMEVKGVVRARKIFV 172

Query: 1023 GGIPLSLTEDDLRDYFSSYGNIVEHQIMIDRNTGRPRGFGFVTFETEDSVERIFSDGRMH 844
            GGIP +LTED+L +YFS YGNIVEHQIM+D  TGR RGFGFVTFETEDSVE+IFS GR H
Sbjct: 173  GGIPPTLTEDELGEYFSVYGNIVEHQIMLDHKTGRSRGFGFVTFETEDSVEQIFSTGRTH 232

Query: 843  ELDGKRVEIKRAQPKQAGFDHGQENRMRRG-SGSTKSYGS 727
            EL GKRVEIK+A PK+ G D+G   +   G S     YG+
Sbjct: 233  ELGGKRVEIKKAVPKRNGGDYGSSGKYHTGFSNGAGGYGA 272


>emb|CBI35964.3| unnamed protein product [Vitis vinifera]
          Length = 353

 Score =  275 bits (703), Expect = 3e-71
 Identities = 137/220 (62%), Positives = 173/220 (78%)
 Frame = -2

Query: 1371 SNVDDSSARHELKHSIDDSSAGKLFVGGIAWETREEAFTKYFSKYGEISDSVIMMDKFSG 1192
            ++VD      +    + +S +GKLFVGGI+WET EE FT YFS YGEI+DSVIMMD+ +G
Sbjct: 30   NSVDSEGIGIQQLVDVRNSYSGKLFVGGISWETSEEIFTNYFSNYGEITDSVIMMDRHTG 89

Query: 1191 RPRGFGFVTFADPEVANRVLQEDHVIDGRTVEVKRTVPRGENMQNRGIIRTKKIFVGGIP 1012
            RPRGFGF+TFADP VA++VL+EDHVIDGR VEVK+TVPR E M+ RG+ +T+KIFVGGIP
Sbjct: 90   RPRGFGFITFADPAVADKVLEEDHVIDGRAVEVKKTVPR-EGMEVRGVSKTRKIFVGGIP 148

Query: 1011 LSLTEDDLRDYFSSYGNIVEHQIMIDRNTGRPRGFGFVTFETEDSVERIFSDGRMHELDG 832
             SLTED+L+DYFSSYG IVE+QIM+D  TGR RGFGFVTF +ED+VER+FS+G+ HEL G
Sbjct: 149  SSLTEDELKDYFSSYGAIVENQIMLDHVTGRSRGFGFVTFVSEDAVERLFSEGKTHELGG 208

Query: 831  KRVEIKRAQPKQAGFDHGQENRMRRGSGSTKSYGSFSGDQ 712
            K VEIK+A+PK+AG ++         +G+ K YG  +G Q
Sbjct: 209  KLVEIKKAEPKRAGAEY--------NAGAAKFYGGRNGSQ 240


>gb|ACR34605.1| unknown [Zea mays] gi|413926095|gb|AFW66027.1| hypothetical protein
            ZEAMMB73_185087 [Zea mays]
          Length = 366

 Score =  273 bits (698), Expect = 1e-70
 Identities = 136/235 (57%), Positives = 174/235 (74%), Gaps = 1/235 (0%)
 Frame = -2

Query: 1419 YSAQQQHQNYPRRDYDSNVDDSSARHELKHSIDDSSAGKLFVGGIAWETREEAFTKYFSK 1240
            Y    QH+      YD  VD+    H  +    D  +GK+FVGG+AWET EE+F+K+F K
Sbjct: 4    YPEDNQHE---LNGYDEEVDEEEG-HPGRRVGRDGGSGKIFVGGVAWETTEESFSKHFEK 59

Query: 1239 YGEISDSVIMMDKFSGRPRGFGFVTFADPEVANRVLQEDHVIDGRTVEVKRTVPRGENMQ 1060
            YG I+DSVIM DK +  PRGFGFVTF+DP V ++VL++DHVIDGRTVEVKRTVPR E + 
Sbjct: 60   YGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLEDDHVIDGRTVEVKRTVPREEMIT 119

Query: 1059 NRGIIRTKKIFVGGIPLSLTEDDLRDYFSSYGNIVEHQIMIDRNTGRPRGFGFVTFETED 880
              G  +T+KIF+GG+P SLTED+L+D+FSSYGN+VEHQIM+D +TGR RGFGF+TFE+ED
Sbjct: 120  KDGP-KTRKIFIGGLPPSLTEDELKDHFSSYGNVVEHQIMLDHSTGRSRGFGFITFESED 178

Query: 879  SVERIFSDGRMHELDGKRVEIKRAQPKQAGFDHGQENRMRRGSGSTK-SYGSFSG 718
            SVER+ S+GRM +L GK+VEIK+A+PK+ G DH    R   G G+ + SY S  G
Sbjct: 179  SVERVISEGRMRDLGGKQVEIKKAEPKKHGSDHSSNGRSNHGGGAYRNSYRSGGG 233


>ref|XP_002276110.2| PREDICTED: nucleolin-like [Vitis vinifera]
          Length = 501

 Score =  271 bits (694), Expect = 3e-70
 Identities = 134/203 (66%), Positives = 164/203 (80%)
 Frame = -2

Query: 1320 DSSAGKLFVGGIAWETREEAFTKYFSKYGEISDSVIMMDKFSGRPRGFGFVTFADPEVAN 1141
            D    KLFVGGI+WET EE FT YFS YGEI+DSVIMMD+ +GRPRGFGF+TFADP VA+
Sbjct: 195  DEDKEKLFVGGISWETSEEIFTNYFSNYGEITDSVIMMDRHTGRPRGFGFITFADPAVAD 254

Query: 1140 RVLQEDHVIDGRTVEVKRTVPRGENMQNRGIIRTKKIFVGGIPLSLTEDDLRDYFSSYGN 961
            +VL+EDHVIDGR VEVK+TVPR E M+ RG+ +T+KIFVGGIP SLTED+L+DYFSSYG 
Sbjct: 255  KVLEEDHVIDGRAVEVKKTVPR-EGMEVRGVSKTRKIFVGGIPSSLTEDELKDYFSSYGA 313

Query: 960  IVEHQIMIDRNTGRPRGFGFVTFETEDSVERIFSDGRMHELDGKRVEIKRAQPKQAGFDH 781
            IVE+QIM+D  TGR RGFGFVTF +ED+VER+FS+G+ HEL GK VEIK+A+PK+AG ++
Sbjct: 314  IVENQIMLDHVTGRSRGFGFVTFVSEDAVERLFSEGKTHELGGKLVEIKKAEPKRAGAEY 373

Query: 780  GQENRMRRGSGSTKSYGSFSGDQ 712
                     +G+ K YG  +G Q
Sbjct: 374  --------NAGAAKFYGGRNGSQ 388


>dbj|BAJ97842.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 413

 Score =  270 bits (689), Expect = 1e-69
 Identities = 142/259 (54%), Positives = 182/259 (70%), Gaps = 8/259 (3%)
 Frame = -2

Query: 1479 YGDDGPH--NQYEDEEDYPQEMYSAQQQHQNYP----RRDYDSNVDDSSARHELKHSIDD 1318
            Y +D  H  N YEDE +  +E+       + +P    RRD         A  +   +   
Sbjct: 4    YPEDNQHAMNGYEDEVEEVEEV-----DEEGHPGRRGRRDVGDGGGYGDAGGDDGRAGGG 58

Query: 1317 SSAGKLFVGGIAWETREEAFTKYFSKYGEISDSVIMMDKFSGRPRGFGFVTFADPEVANR 1138
             S+GK+FVGG+AWET EE+F+K+F KYG I+DSVIM DK +  PRGFGFVTF+DP V ++
Sbjct: 59   DSSGKIFVGGVAWETTEESFSKHFGKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDK 118

Query: 1137 VLQEDHVIDGRTVEVKRTVPRGENMQNRGIIRTKKIFVGGIPLSLTEDDLRDYFSSYGNI 958
            VL+++H IDGRTVEVKRTVPR E M ++   +T+KIFVGG+P +LTEDDLRD+FSSYGN+
Sbjct: 119  VLEDEHNIDGRTVEVKRTVPR-EEMSSKDGPKTRKIFVGGLPSTLTEDDLRDHFSSYGNV 177

Query: 957  VEHQIMIDRNTGRPRGFGFVTFETEDSVERIFSDGRMHELDGKRVEIKRAQPKQAGFDHG 778
            VEHQIM+D +TGR RGFGFVTFE+EDSVER+ S+GRM +L GK+VEIK+A+PK+ G DH 
Sbjct: 178  VEHQIMVDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEPKKHGGDHS 237

Query: 777  QENRMRR--GSGSTKSYGS 727
               R     G G   SY S
Sbjct: 238  SNGRSSHSGGGGYRSSYRS 256


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