BLASTX nr result

ID: Lithospermum22_contig00002959 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00002959
         (953 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540217.1| PREDICTED: splicing factor U2af small subuni...   333   3e-89
ref|XP_002277445.2| PREDICTED: splicing factor U2af small subuni...   330   3e-88
gb|AAH03883.1| CDNA sequence BC003883 [Mus musculus]                  329   7e-88
ref|XP_004139466.1| PREDICTED: splicing factor U2af small subuni...   328   1e-87
ref|XP_004171272.1| PREDICTED: splicing factor U2af small subuni...   327   3e-87

>ref|XP_003540217.1| PREDICTED: splicing factor U2af small subunit A-like [Glycine max]
          Length = 315

 Score =  333 bits (855), Expect = 3e-89
 Identities = 159/186 (85%), Positives = 164/186 (88%)
 Frame = +2

Query: 23  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTILLSNMYQRPDMITP 202
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTILLSNMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTILLSNMYQRPDMITP 60

Query: 203 GVDPLGNPIHPTKIQHHXXXXXXXXXXXXSKYGEIESLNICDNLADHMVGNVYVQFREEE 382
           GVD  G+PI P KIQ H            SKYG+IESLN+CDNLADHMVGNVYVQFREEE
Sbjct: 61  GVDAHGHPIDPRKIQDHFEEFYEDLFDELSKYGDIESLNVCDNLADHMVGNVYVQFREEE 120

Query: 383 QAAKAVSNLTGRFYAGRPIIVDFSPVTDFREATCRQYDENTCNRGGYCNFMHLKRIGREL 562
            AA AV NLTGRFYAGRPIIVDFSPVTDFREATCRQY+ENTCNRGGYCNFMHLKRI REL
Sbjct: 121 HAANAVRNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISREL 180

Query: 563 KRHLFG 580
           +R LFG
Sbjct: 181 RRQLFG 186


>ref|XP_002277445.2| PREDICTED: splicing factor U2af small subunit B-like [Vitis
           vinifera]
          Length = 343

 Score =  330 bits (846), Expect = 3e-88
 Identities = 155/186 (83%), Positives = 162/186 (87%)
 Frame = +2

Query: 23  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTILLSNMYQRPDMITP 202
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPT+LLSNMYQRPDM+TP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMVTP 60

Query: 203 GVDPLGNPIHPTKIQHHXXXXXXXXXXXXSKYGEIESLNICDNLADHMVGNVYVQFREEE 382
           GVDP G P+ P KIQ H            SKYGEIESLNICDNLADHMVGNVYVQFREEE
Sbjct: 61  GVDPQGQPLDPRKIQEHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120

Query: 383 QAAKAVSNLTGRFYAGRPIIVDFSPVTDFREATCRQYDENTCNRGGYCNFMHLKRIGREL 562
            AA A+ NL GRFYAGRPIIVDFSPVTDFREATCRQY+EN CNRGGYCNFMHLK+I REL
Sbjct: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENICNRGGYCNFMHLKKISREL 180

Query: 563 KRHLFG 580
           +R LFG
Sbjct: 181 RRQLFG 186


>gb|AAH03883.1| CDNA sequence BC003883 [Mus musculus]
          Length = 310

 Score =  329 bits (843), Expect = 7e-88
 Identities = 154/186 (82%), Positives = 163/186 (87%)
 Frame = +2

Query: 23  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTILLSNMYQRPDMITP 202
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPT+LL+NMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLANMYQRPDMITP 60

Query: 203 GVDPLGNPIHPTKIQHHXXXXXXXXXXXXSKYGEIESLNICDNLADHMVGNVYVQFREEE 382
           GVDP G P+ P KIQ H            SKYGEIESLNICDNLADHMVGNVYVQFREEE
Sbjct: 61  GVDPQGQPLDPRKIQQHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120

Query: 383 QAAKAVSNLTGRFYAGRPIIVDFSPVTDFREATCRQYDENTCNRGGYCNFMHLKRIGREL 562
            A +A+ NL+GRFYAGRPIIVDFSPVTDFREATCRQY+EN CNRGGYCNFMHLK+I REL
Sbjct: 121 HAGEALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180

Query: 563 KRHLFG 580
           +R LFG
Sbjct: 181 RRQLFG 186


>ref|XP_004139466.1| PREDICTED: splicing factor U2af small subunit A-like [Cucumis
           sativus] gi|449510609|ref|XP_004163713.1| PREDICTED:
           splicing factor U2af small subunit A-like [Cucumis
           sativus]
          Length = 326

 Score =  328 bits (841), Expect = 1e-87
 Identities = 155/185 (83%), Positives = 162/185 (87%)
 Frame = +2

Query: 23  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTILLSNMYQRPDMITP 202
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPT+LLSNMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60

Query: 203 GVDPLGNPIHPTKIQHHXXXXXXXXXXXXSKYGEIESLNICDNLADHMVGNVYVQFREEE 382
           GVD  GNPI P  IQ H            +KYGEIESLN+CDNLADHMVGNVYVQFREEE
Sbjct: 61  GVDAQGNPIDPRNIQDHFEEFYEDLFQELNKYGEIESLNVCDNLADHMVGNVYVQFREEE 120

Query: 383 QAAKAVSNLTGRFYAGRPIIVDFSPVTDFREATCRQYDENTCNRGGYCNFMHLKRIGREL 562
           QAA A+ NL+GRFYAGRPIIVDFSPVTDFREATCRQY+EN CNRGGYCNFMHLKRIGREL
Sbjct: 121 QAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRIGREL 180

Query: 563 KRHLF 577
           +  LF
Sbjct: 181 RHELF 185


>ref|XP_004171272.1| PREDICTED: splicing factor U2af small subunit A-like [Cucumis
           sativus]
          Length = 317

 Score =  327 bits (838), Expect = 3e-87
 Identities = 153/186 (82%), Positives = 162/186 (87%)
 Frame = +2

Query: 23  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTILLSNMYQRPDMITP 202
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPT+LLSNMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60

Query: 203 GVDPLGNPIHPTKIQHHXXXXXXXXXXXXSKYGEIESLNICDNLADHMVGNVYVQFREEE 382
           GVDP G  + P K+Q H            SKYG++ESLNICDNLADHMVGNVYVQFREEE
Sbjct: 61  GVDPQGQALDPRKVQDHFEDFYEDLFEELSKYGDLESLNICDNLADHMVGNVYVQFREEE 120

Query: 383 QAAKAVSNLTGRFYAGRPIIVDFSPVTDFREATCRQYDENTCNRGGYCNFMHLKRIGREL 562
           QAA A+ NL GRFYAGRPIIVDFSPVTDFREATCRQY+EN CNRGGYCNFMHLK+I REL
Sbjct: 121 QAANALHNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180

Query: 563 KRHLFG 580
           +R LFG
Sbjct: 181 RRRLFG 186


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