BLASTX nr result

ID: Lithospermum22_contig00002922 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00002922
         (4239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267178.1| PREDICTED: heterogeneous nuclear ribonucleop...   226   5e-56
ref|XP_002315330.1| predicted protein [Populus trichocarpa] gi|2...   223   3e-55
emb|CBI31404.3| unnamed protein product [Vitis vinifera]              223   5e-55
emb|CAN66927.1| hypothetical protein VITISV_011831 [Vitis vinifera]   219   4e-54
ref|XP_003555886.1| PREDICTED: uncharacterized protein LOC100809...   207   2e-50

>ref|XP_002267178.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G [Vitis vinifera]
          Length = 278

 Score =  226 bits (575), Expect = 5e-56
 Identities = 130/251 (51%), Positives = 143/251 (56%), Gaps = 12/251 (4%)
 Frame = +3

Query: 3300 IEIQIMLERDTGRPRGFGFITFADRRGMEDAIREMHGRELGDRAISVNKAQPKMXXXXXX 3479
            IE QIMLERDTGRPRGFGFIT+ADRRGMEDAIREMHGR+ GDR ISVNKAQPKM      
Sbjct: 34   IESQIMLERDTGRPRGFGFITYADRRGMEDAIREMHGRDFGDRIISVNKAQPKMGEDPDH 93

Query: 3480 XXXXXXXXXXXXXXXXXXXX--QDDCFKCGRPGHWARDCPSXXXXXXXXXXXXXXXXXXX 3653
                                  QDDCFKCGRPGHWARDCPS                   
Sbjct: 94   GYNGGYSSGGRGSYGGGDRSAGQDDCFKCGRPGHWARDCPSSGGGRGRGGAPFPSRSRFS 153

Query: 3654 XXXXXXXXXXXXXXXXXXXXE----EKDRFDAREDRYGGRGVSDRYPPPVADRYAV-GDR 3818
                                     ++DRF++R+++YG R   DRY   V DRYA  GDR
Sbjct: 154  GGRGDRFGGERDRYMEDRYDGGRYGDRDRFESRDNKYGTR---DRY---VNDRYAPSGDR 207

Query: 3819 Y--DRYGGPDRYAPSSFGKDRGYDRDAGLRGSSDRFAAGGPVRFEGRSYRERPAPYDRPR 3992
            +  DRYGG DRY  + +GKDRGYDRDA  RG  DR+A GG  R EGRSYR RP PYDRP 
Sbjct: 208  FSGDRYGGSDRYPQNGYGKDRGYDRDAAPRGGGDRYAGGGSARNEGRSYRNRPGPYDRPN 267

Query: 3993 HA---PSFDRY 4016
                  SFDRY
Sbjct: 268  RGGRPSSFDRY 278


>ref|XP_002315330.1| predicted protein [Populus trichocarpa] gi|222864370|gb|EEF01501.1|
            predicted protein [Populus trichocarpa]
          Length = 280

 Score =  223 bits (568), Expect = 3e-55
 Identities = 123/254 (48%), Positives = 144/254 (56%), Gaps = 15/254 (5%)
 Frame = +3

Query: 3300 IEIQIMLERDTGRPRGFGFITFADRRGMEDAIREMHGRELGDRAISVNKAQPKMXXXXXX 3479
            +E Q+MLERDTGRPRGFGFITFADRR M+DAIREMHGR+ GDR ISVNKAQPK+      
Sbjct: 34   VESQVMLERDTGRPRGFGFITFADRRAMDDAIREMHGRDFGDRVISVNKAQPKIGGDDSD 93

Query: 3480 XXXXXXXXXXXXXXXXXXXX---QDDCFKCGRPGHWARDCPSXXXXXXXXXXXXXXXXXX 3650
                                   QD+CFKCGR GHWARDCPS                  
Sbjct: 94   HGYRGGYSTGSRGGYGGGDRPAGQDECFKCGRSGHWARDCPSAGGRGGGGGLISSRSRFG 153

Query: 3651 XXXXXXXXXXXXXXXXXXXXXE-----EKDRFDAREDRYGGRG--VSDRYPPPVADRYAV 3809
                                 +     +KDRFD+R+++YGGR    SDRYPP        
Sbjct: 154  GAGDRGDRFGGDRDRYIDDRYDGGRYGDKDRFDSRDNKYGGRDRYASDRYPPN------- 206

Query: 3810 GDRY--DRYGGPDRYAPSSFGKDRGYDRDAGLRGSSDRFAAGGPVRFEGRSYRERPAPYD 3983
            GDR+  DRYGG DRYA + +GKD+GYDRD G RG +DR+ +GGP R +  SYR RPAPYD
Sbjct: 207  GDRFSGDRYGGSDRYAQNGYGKDKGYDRDVGPRGGNDRYGSGGPQRNDRSSYRNRPAPYD 266

Query: 3984 RPR---HAPSFDRY 4016
            RP    H  SF+RY
Sbjct: 267  RPSRGGHPSSFERY 280


>emb|CBI31404.3| unnamed protein product [Vitis vinifera]
          Length = 294

 Score =  223 bits (567), Expect = 5e-55
 Identities = 133/264 (50%), Positives = 148/264 (56%), Gaps = 12/264 (4%)
 Frame = +3

Query: 3261 RICSQISAFESNEIEIQIMLERDTGRPRGFGFITFADRRGMEDAIREMHGRELGDRAISV 3440
            +ICS  S FE     + IMLERDTGRPRGFGFIT+ADRRGMEDAIREMHGR+ GDR ISV
Sbjct: 42   QICSSFS-FEL----VFIMLERDTGRPRGFGFITYADRRGMEDAIREMHGRDFGDRIISV 96

Query: 3441 NKAQPKMXXXXXXXXXXXXXXXXXXXXXXXXXX--QDDCFKCGRPGHWARDCPSXXXXXX 3614
            NKAQPKM                            QDDCFKCGRPGHWARDCPS      
Sbjct: 97   NKAQPKMGEDPDHGYNGGYSSGGRGSYGGGDRSAGQDDCFKCGRPGHWARDCPSSGGGRG 156

Query: 3615 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE----EKDRFDAREDRYGGRGVSDRYP 3782
                                                  ++DRF++R+++YG R   DRY 
Sbjct: 157  RGGAPFPSRSRFSGGRGDRFGGERDRYMEDRYDGGRYGDRDRFESRDNKYGTR---DRY- 212

Query: 3783 PPVADRYAV-GDRY--DRYGGPDRYAPSSFGKDRGYDRDAGLRGSSDRFAAGGPVRFEGR 3953
              V DRYA  GDR+  DRYGG DRY  + +GKDRGYDRDA  RG  DR+A GG  R EGR
Sbjct: 213  --VNDRYAPSGDRFSGDRYGGSDRYPQNGYGKDRGYDRDAAPRGGGDRYAGGGSARNEGR 270

Query: 3954 SYRERPAPYDRPRHA---PSFDRY 4016
            SYR RP PYDRP       SFDRY
Sbjct: 271  SYRNRPGPYDRPNRGGRPSSFDRY 294


>emb|CAN66927.1| hypothetical protein VITISV_011831 [Vitis vinifera]
          Length = 240

 Score =  219 bits (559), Expect = 4e-54
 Identities = 126/246 (51%), Positives = 139/246 (56%), Gaps = 12/246 (4%)
 Frame = +3

Query: 3315 MLERDTGRPRGFGFITFADRRGMEDAIREMHGRELGDRAISVNKAQPKMXXXXXXXXXXX 3494
            MLERDTGRPRGFGFIT+ADRRGMEDAIREMHGR+ GDR ISVNKAQPKM           
Sbjct: 1    MLERDTGRPRGFGFITYADRRGMEDAIREMHGRDFGDRIISVNKAQPKMGEDPDHGYNGG 60

Query: 3495 XXXXXXXXXXXXXXX--QDDCFKCGRPGHWARDCPSXXXXXXXXXXXXXXXXXXXXXXXX 3668
                             QDDCFKCGRPGHWARDCPS                        
Sbjct: 61   YSSGGRGSYGGGDRSAGQDDCFKCGRPGHWARDCPSSGGGRGRGGAPFPSRSRFSGGRGD 120

Query: 3669 XXXXXXXXXXXXXXXE----EKDRFDAREDRYGGRGVSDRYPPPVADRYAV-GDRY--DR 3827
                                ++DRF++R+++YG R   DRY   V DRYA  GDR+  DR
Sbjct: 121  RFGGERDRYMEDRYDGGRYGDRDRFESRDNKYGTR---DRY---VNDRYAPSGDRFSGDR 174

Query: 3828 YGGPDRYAPSSFGKDRGYDRDAGLRGSSDRFAAGGPVRFEGRSYRERPAPYDRPRHA--- 3998
            YGG DRY  + +GKDRGYDRDA  RG  DR+A GG  R EGRSYR RP PYDRP      
Sbjct: 175  YGGSDRYPQNGYGKDRGYDRDAAPRGGGDRYAGGGSARNEGRSYRNRPGPYDRPNRGGRP 234

Query: 3999 PSFDRY 4016
             SFDRY
Sbjct: 235  SSFDRY 240


>ref|XP_003555886.1| PREDICTED: uncharacterized protein LOC100809519 [Glycine max]
          Length = 279

 Score =  207 bits (527), Expect = 2e-50
 Identities = 122/252 (48%), Positives = 137/252 (54%), Gaps = 13/252 (5%)
 Frame = +3

Query: 3300 IEIQIMLERDTGRPRGFGFITFADRRGMEDAIREMHGRELGDRAISVNKAQPKM--XXXX 3473
            +E QIM+ERDTGRPRGFGFITFADRRGMEDAI+EMHGRE+GDR ISVNKAQPKM      
Sbjct: 34   LECQIMMERDTGRPRGFGFITFADRRGMEDAIKEMHGREIGDRIISVNKAQPKMGGDDVD 93

Query: 3474 XXXXXXXXXXXXXXXXXXXXXXQDDCFKCGRPGHWARDCPSXXXXXXXXXXXXXXXXXXX 3653
                                  QDDCFKCGRPGHWARDCP                    
Sbjct: 94   QGYRGGYSSGGRGSYGAGDRVGQDDCFKCGRPGHWARDCPLAGGGRGRGGSSFPSRPRFG 153

Query: 3654 XXXXXXXXXXXXXXXXXXXXEE------KDRFDAREDRYGGRGVSDRYPPPVADRYAV-G 3812
                                 E      +DRFD R+ +YG R   DRY    +DRY   G
Sbjct: 154  AAGGNGDRLGGERDRYVDDRYEGGRYGDRDRFDNRDYKYGSR---DRY---ASDRYPTSG 207

Query: 3813 DRY--DRYGGPDRYAPSSFGKDRGYDRDAGLRGSSDRFAAGGPVRFEGRSYRERPAPYDR 3986
            DR+  DRYGG   Y  + +GK+RGYDR  G RG +DR+ +G   R EGRSYR RP PYDR
Sbjct: 208  DRFASDRYGGGSDYPQNGYGKERGYDRYGGPRGGADRYGSGMGGRDEGRSYRGRPGPYDR 267

Query: 3987 PRHA--PSFDRY 4016
            P     PS DRY
Sbjct: 268  PSRGSRPSLDRY 279


Top