BLASTX nr result
ID: Lithospermum22_contig00002911
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00002911
(2460 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002331746.1| predicted protein [Populus trichocarpa] gi|2... 160 5e-67
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc... 146 1e-62
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana] 135 5e-57
dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thal... 124 2e-56
dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like ... 119 4e-54
>ref|XP_002331746.1| predicted protein [Populus trichocarpa] gi|222874272|gb|EEF11403.1|
predicted protein [Populus trichocarpa]
Length = 503
Score = 160 bits (404), Expect(2) = 5e-67
Identities = 91/256 (35%), Positives = 141/256 (55%), Gaps = 1/256 (0%)
Frame = -2
Query: 986 GDSMYILHNILKSIKSKLRTLNKEVYSNISDRVIEIKNEWEAAQAHIMAGDVNSELLTKS 807
G MY L LK +K +L+ N +SNISDRV + KNE + AQ + N L +
Sbjct: 242 GCPMYQLCCNLKKLKQELKLFNMAHFSNISDRVKDAKNEMDKAQQALHTAHENPILCMRE 301
Query: 806 RNLGVEYNKLCKTEWEFCRSKSRISWYKDEDANTKLFHNSMRVNQSRNLITRIEDDQGRM 627
R++ +Y + E F + K+RI W D NT FH S+ +RN + + + G +
Sbjct: 302 RDVVHKYASTVRAEESFFKQKARIQWLSLGDQNTSYFHKSVNGRHNRNKLLSLTREDGEV 361
Query: 626 IDEYEHVKLTAIN-FYKGLFAEQNSTINKKDWLDMITSCRIEQEDYCMLQREITRSEIVA 450
++ +E VK I F++ L +Q + ++ ++ + ++ +L + +TR EI
Sbjct: 362 VEGHEAVKSEVIAYFHRVLGVDQMPRVLNEEVMESAINLKLSSTQQHVLAQVVTRKEIKH 421
Query: 449 CFMAMKVDKAPCPDNFSFEFYKDAWSIVGESVVDGV*SFFQTRRMSKFVNSTSLTLIPKV 270
++K +KAP D F+ F+K W IVGE V++ V S FQTRRM K +N+TS++LIPKV
Sbjct: 422 AMFSLKNNKAPGLDGFNAGFFKRMWHIVGEDVINAVRSLFQTRRMLKEMNATSISLIPKV 481
Query: 269 QQPKTMRDFRPIAC*N 222
P + DFRPI+C N
Sbjct: 482 ANPTRLTDFRPISCCN 497
Score = 123 bits (309), Expect(2) = 5e-67
Identities = 69/216 (31%), Positives = 104/216 (48%)
Frame = -1
Query: 1701 LVENKVRIENYDRIVNSVFPGWNCVNNNVTGRVGRIWICWNSCNVSITTISSDQQYLFVK 1522
LVE +V+ +N D + + W+ + N GRIW+CWN+ V + Q + V
Sbjct: 18 LVETRVKDKNKDNVSQLLLRSWSFLYNYDFSCRGRIWVCWNADTVKVNVFGMSDQAIHVS 77
Query: 1521 VEVLVHSRDKFFMSAIYGKNTASERNDLWASLLQAK*SVMDPPWIVIGDFNVVRNMSEAV 1342
V +L + F S IYG N AS R LW+ ++ PWI++GDFN +RN S +
Sbjct: 78 VTILA-TNISFNTSIIYGDNNASLREALWSDIVSRSDGWESTPWILMGDFNAIRNQSHRL 136
Query: 1341 GGNPHENQAMDDFSNCIQIIDVMKMYHSGCEFTWSRNWDSQSILRVLDRVLCSKEWLHKM 1162
GG+ MD CI+ V + +SG +TWS I+R LDRVL +++W
Sbjct: 137 GGSTTWAGTMDRLDTCIREAKVDDLRYSGMHYTWSNQCPENLIMRKLDRVLVNEKWNLNF 196
Query: 1161 QGCRVHYQVPVESDHCAMDVSLYTIIALEPRPFKYY 1054
V + SDH M V + +PF+++
Sbjct: 197 PLSEVRFLPSGISDHSPMVVKVIGNDQNIKKPFRFF 232
>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
Length = 1214
Score = 146 bits (369), Expect(3) = 1e-62
Identities = 84/288 (29%), Positives = 153/288 (53%), Gaps = 3/288 (1%)
Frame = -2
Query: 1049 FWSAHEHFLGMVRDT*NK-AVDGDSMYILHNILKSIKSKLRTLNKEVYSNISDRVIEIKN 873
F H F+ +R T ++ A G +M+ L K +K +RT N+E YS + RV++
Sbjct: 252 FLMHHPEFIEKIRVTWDRLAYQGSAMFTLSKKSKFLKGTIRTFNREHYSGLEKRVVQAAQ 311
Query: 872 EWEAAQAHIMAGDVNSELLTKSRNLGVEYNKLCKTEWEFCRSKSRISWYKDEDANTKLFH 693
+ Q +++A +S L + + +L E F KSR+ W K D+NT FH
Sbjct: 312 NLKTCQNNLLAAP-SSYLAGLEKEAHRSWAELALAEERFLCQKSRVLWLKCGDSNTTFFH 370
Query: 692 NSMRVNQSRNLITRIEDDQGRMIDEYEHVKLTAINFYKGLFAEQNSTINKK--DWLDMIT 519
M ++ N I + D GR I+ + ++ ++F+K LF + I+ + ++ +T
Sbjct: 371 RMMTARRAINEIHYLLDQTGRRIENTDELQTHCVDFFKELFGSSSHLISAEGISQINSLT 430
Query: 518 SCRIEQEDYCMLQREITRSEIVACFMAMKVDKAPCPDNFSFEFYKDAWSIVGESVVDGV* 339
+ ++ +L+ E++ ++I + F A+ +K+P PD ++ EF+K WSIVG S++ V
Sbjct: 431 RFKCDENTRQLLEAEVSEADIKSEFFALPSNKSPGPDGYTSEFFKKTWSIVGPSLIAAVQ 490
Query: 338 SFFQTRRMSKFVNSTSLTLIPKVQQPKTMRDFRPIAC*NILAVISCRL 195
FF++ R+ NST++T++PK + +FRPI+C N + + +L
Sbjct: 491 EFFRSGRLLGQWNSTAVTMVPKKPNADRITEFRPISCCNAIYKVISKL 538
Score = 118 bits (295), Expect(3) = 1e-62
Identities = 72/249 (28%), Positives = 117/249 (46%), Gaps = 4/249 (1%)
Frame = -1
Query: 1779 WNIRGINRPKKQYRIRKVCKYFDVV--CLVENKVRIENYDRIVNSVFPGWNCVNNNVTGR 1606
WN+RG N ++ RK K + ++E +V+ R + S FPGW V N
Sbjct: 7 WNVRGFNNSVRRRNFRKWFKLSKALFGSILETRVKEHRARRSLLSSFPGWKSVCNYEFAA 66
Query: 1605 VGRIWICWNSCNVSITTISSDQQYLFVKVEVLVHSRDKFFMSAIYGKNTASERNDLWASL 1426
+GRIW+ W+ V +T +S Q + V+ L H +F ++ +Y N R LW+ L
Sbjct: 67 LGRIWVVWDPA-VEVTVLSKSDQTISCTVK-LPHISTEFVVTFVYAVNCRYGRRRLWSEL 124
Query: 1425 --LQAK*SVMDPPWIVIGDFNVVRNMSEAVGGNPHENQAMDDFSNCIQIIDVMKMYHSGC 1252
L A + D PWI++GDFN + +A G + M++F C+ ++ + G
Sbjct: 125 ELLAANQTTSDKPWIILGDFNQSLDPVDASTGGSRITRGMEEFRECLLTSNISDLPFRGN 184
Query: 1251 EFTWSRNWDSQSILRVLDRVLCSKEWLHKMQGCRVHYQVPVESDHCAMDVSLYTIIALEP 1072
+TW N ++ I + +DR+L + WL + SDHC V++
Sbjct: 185 HYTWWNNQENNPIAKKIDRILVNDSWLIASPLSYGSFCAMEFSDHCPSCVNISNQSGGRN 244
Query: 1071 RPFKYYHFL 1045
+PFK +FL
Sbjct: 245 KPFKLSNFL 253
Score = 25.4 bits (54), Expect(3) = 1e-62
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = -3
Query: 196 FVGIQQSAYVPGRYISDGVLLMQDIVNEY 110
++ QSA+V GR +++ VLL ++V +
Sbjct: 550 WISPSQSAFVKGRLLTENVLLATELVQGF 578
>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
Length = 1213
Score = 135 bits (339), Expect(3) = 5e-57
Identities = 83/282 (29%), Positives = 143/282 (50%), Gaps = 4/282 (1%)
Frame = -2
Query: 1028 FLGMVRDT*-NKAVDGDSMYILHNILKSIKSKLRTLNKEVYSNISDRVIEIKNEWEAAQA 852
FL +VRD V G SM+ + LK++K ++ ++ YS + R E + Q
Sbjct: 261 FLNLVRDNWFTLNVVGSSMFRVSKKLKALKKPIKDFSRLNYSELEKRTKEAHDFLIGCQD 320
Query: 851 HIMAGD--VNSELLTKSRNLGVEYNKLCKTEWEFCRSKSRISWYKDEDANTKLFHNSMRV 678
+A +N+ ++ +++ L E F R KSRISW+ + D NTK FH
Sbjct: 321 RTLADPTPINASFELEAER---KWHILTAAEESFFRQKSRISWFAEGDGNTKYFHRMADA 377
Query: 677 NQSRNLITRIEDDQGRMIDEYEHVKLTAINFYKGLFAEQ-NSTINKKDWLDMITSCRIEQ 501
S N I+ + D G+++D E + +++ L ++ + + +++ ++++ S R
Sbjct: 378 RNSSNSISALYDGNGKLVDSQEGILDLCASYFGSLLGDEVDPYLMEQNDMNLLLSYRCSP 437
Query: 500 EDYCMLQREITRSEIVACFMAMKVDKAPCPDNFSFEFYKDAWSIVGESVVDGV*SFFQTR 321
C L+ + +I A ++ +K+ PD F+ EF+ D+WSIVG V D + FF +
Sbjct: 438 AQVCELESTFSNEDIRAALFSLPRNKSCGPDGFTAEFFIDSWSIVGAEVTDAIKEFFSSG 497
Query: 320 RMSKFVNSTSLTLIPKVQQPKTMRDFRPIAC*NILAVISCRL 195
+ K N+T++ LIPK+ P DFRPI+C N L + RL
Sbjct: 498 CLLKQWNATTIVLIPKIVNPTCTSDFRPISCLNTLYKVIARL 539
Score = 104 bits (260), Expect(3) = 5e-57
Identities = 67/252 (26%), Positives = 118/252 (46%), Gaps = 7/252 (2%)
Frame = -1
Query: 1779 WNIRGINRPKKQYRIRKVCKYFDVVC--LVENKVRIENYDRIVNSVFPGWNCVNNNVTGR 1606
WNIRG N + +K K + ++E V+ + +N++ PGW+ V N
Sbjct: 8 WNIRGFNNVSHRSGFKKWVKANKPIFGGVIETHVKQPKDRKFINALLPGWSFVENYAFSD 67
Query: 1605 VGRIWICWNSCNVSITTISSDQQYLFVKVEVLVHSRDKFFMSAIYGKNTASERNDLWASL 1426
+G+IW+ W+ +V + ++ Q + +V +L S +S +Y N + R +LW +
Sbjct: 68 LGKIWVMWDP-SVQVVVVAKSLQMITCEV-LLPGSPSWIIVSVVYAANEVASRKELWIEI 125
Query: 1425 LQAK*S--VMDPPWIVIGDFNVVRNMSEAVGGNP---HENQAMDDFSNCIQIIDVMKMYH 1261
+ S + D PW+V+GDFN V N E NP + + M DF +C+ ++ + +
Sbjct: 126 VNMVVSGIIGDRPWLVLGDFNQVLNPQE--HSNPVSLNVDINMRDFRDCLLAAELSDLRY 183
Query: 1260 SGCEFTWSRNWDSQSILRVLDRVLCSKEWLHKMQGCRVHYQVPVESDHCAMDVSLYTIIA 1081
G FTW + + + +DR+L + W + SDH + V L
Sbjct: 184 KGNTFTWWNKSHTTPVAKKIDRILVNDSWNALFPSSLGIFGSLDFSDHVSCGVVLEETSI 243
Query: 1080 LEPRPFKYYHFL 1045
RPFK++++L
Sbjct: 244 KAKRPFKFFNYL 255
Score = 31.6 bits (70), Expect(3) = 5e-57
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = -3
Query: 205 LADFVGIQQSAYVPGRYISDGVLLMQDIVNEYD 107
L+ + QSA++PGR +++ VLL D+V+ Y+
Sbjct: 548 LSGVISSAQSAFLPGRSLAENVLLATDLVHGYN 580
>dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thaliana]
Length = 910
Score = 124 bits (310), Expect(3) = 2e-56
Identities = 86/285 (30%), Positives = 131/285 (45%), Gaps = 11/285 (3%)
Frame = -2
Query: 1049 FWSAHEHFLGMVRDT*N-KAVDGDSMYILHNILKSIKSKLRTLNKEVYSNISDRVIEIKN 873
F S+H +L + + G M+ L LK K RTLN+ +SNI R
Sbjct: 253 FLSSHPSYLAALSTAWEANTLVGSHMFSLRQHLKVAKLCCRTLNRLRFSNIQQRT----- 307
Query: 872 EWEAAQAHIMAGDVNSELLTKSRNLGVEYNKLCKTEW--------EFCRSKSRISWYKDE 717
AQ+ D+ ELLT + + + +W F R KSRI W +
Sbjct: 308 ----AQSLTRLEDIQVELLTSPSDTLFRREHVARKQWIFFAAALESFFRQKSRIRWLHEG 363
Query: 716 DANTKLFHNSMRVNQSRNLITRIEDDQGRMIDEYEHVKLTAINFYKGLFA--EQNSTINK 543
DANT+ FH ++ +Q+ NLI + D G ++ + +K I +Y L +N T
Sbjct: 364 DANTRFFHRAVIAHQATNLIKFLRGDDGFRVENVDQIKGMLIAYYSHLLGIPSENVTPFS 423
Query: 542 KDWLDMITSCRIEQEDYCMLQREITRSEIVACFMAMKVDKAPCPDNFSFEFYKDAWSIVG 363
+ + + R + L + EI +M +KAP PD F EF+ +AW+IV
Sbjct: 424 VEKIKGLLPFRCDSFLASQLTTIPSEEEITQVLFSMPRNKAPGPDGFPVEFFIEAWAIVK 483
Query: 362 ESVVDGV*SFFQTRRMSKFVNSTSLTLIPKVQQPKTMRDFRPIAC 228
SVV + FF + + + N+T++TLIPKV + FRP+AC
Sbjct: 484 SSVVAAIREFFISGNLPRGFNATAITLIPKVTGADRLTQFRPVAC 528
Score = 119 bits (299), Expect(3) = 2e-56
Identities = 75/258 (29%), Positives = 120/258 (46%), Gaps = 8/258 (3%)
Frame = -1
Query: 1794 MDI*FWNIRGINRPKKQYRIRK--VCKYFDVVCLVENKVRIENYDRIVNSVFPGWNCVNN 1621
M + WNIRG+N +Q +R V C +E V EN + ++ S PGW +N
Sbjct: 1 MKVFCWNIRGLNSRNRQRVVRSWIASNNLLVGCFLETHVAQENANSVLASTLPGWRMDSN 60
Query: 1620 NVTGRVGRIWICWNSCNVSITTISSDQQYLF--VKVEVLVHSRDKFFMSAIYGKNTASER 1447
+GRIWI W+ ++S+ Q +F +K+ L+ S F ++ +YG+N+ +R
Sbjct: 61 YCCSELGRIWIVWDP-SISVLVFKRTDQIMFCSIKIPSLLQS---FAVAFVYGRNSELDR 116
Query: 1446 NDLWASLLQAK*S--VMDPPWIVIGDFNVVRNMSEAVGGNPH--ENQAMDDFSNCIQIID 1279
LW +L + + PW+++GDFN + SE N + M+D C++
Sbjct: 117 RSLWEDILVLSRTSPLSVTPWLLLGDFNQIAAASEHYSINQSLLNLRGMEDLQCCLRDSQ 176
Query: 1278 VMKMYHSGCEFTWSRNWDSQSILRVLDRVLCSKEWLHKMQGCRVHYQVPVESDHCAMDVS 1099
+ + G FTWS + ILR LDR L + EW + P +SDH +
Sbjct: 177 LSDLPSRGVFFTWSNHQQDNPILRKLDRALANGEWFAVFPSALAVFDPPGDSDHAPCIIL 236
Query: 1098 LYTIIALEPRPFKYYHFL 1045
+ + FKY+ FL
Sbjct: 237 IDNQPPPSKKSFKYFSFL 254
Score = 25.8 bits (55), Expect(3) = 2e-56
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = -3
Query: 211 LFLADFVGIQQSAYVPGRYISDGVLLMQDIVNEYD 107
LF+ V Q ++ GR + + VLL ++V+ ++
Sbjct: 546 LFIDQAVQANQVGFIKGRLLCENVLLASELVDNFE 580
>dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
thaliana]
Length = 893
Score = 119 bits (299), Expect(3) = 4e-54
Identities = 86/285 (30%), Positives = 140/285 (49%), Gaps = 7/285 (2%)
Frame = -2
Query: 1028 FLGMVRDT*NKA-VDGDSMYILHNILKSIKSKLRTLNKEVYSNISDRVIEIKNEWEAAQA 852
FL ++R+ V G +MY + LK +K + ++E YS+I RV E + +
Sbjct: 258 FLQLIRENWYSCNVSGSAMYRVSKKLKHLKLPICCFSRENYSDIEKRVSEA-HAIVLHRQ 316
Query: 851 HIMAGDVNSELLTKSRNLGVEYNKLCKTEWEFCRSKSRISWYKDEDANTKLFHNSMRVNQ 672
I + + T ++ L K E F KS ISW + D NT FH + +
Sbjct: 317 RITLTNPSVVHATLELEATRKWQILAKAEESFFCQKSSISWLYEGDNNTAYFHKMADMRK 376
Query: 671 SRNLITRIEDDQGRMIDEY----EHVKLTAINFYKGLFA--EQNSTINKKDWLDMITSCR 510
S N I + DD G I+ E +K + NF++ L E +++ + D ++++ S R
Sbjct: 377 SINTINFLIDDFGERIETQQGIKEGIKEHSCNFFESLLCGVEGENSLAQSD-MNLLLSFR 435
Query: 509 IEQEDYCMLQREITRSEIVACFMAMKVDKAPCPDNFSFEFYKDAWSIVGESVVDGV*SFF 330
+ L+R + +I F ++ +KA PD +S EF+K W +VG V + V FF
Sbjct: 436 CSVDQINDLERSFSDLDIQEAFFSLPRNKASGPDGYSSEFFKGVWFVVGPEVTEAVQEFF 495
Query: 329 QTRRMSKFVNSTSLTLIPKVQQPKTMRDFRPIAC*NILAVISCRL 195
++ ++ K N+T+L LIPK+ M DFRPI+C N L + +L
Sbjct: 496 RSGQLLKQWNATTLVLIPKITNSSKMTDFRPISCLNTLYKVIAKL 540
Score = 108 bits (269), Expect(3) = 4e-54
Identities = 64/248 (25%), Positives = 118/248 (47%), Gaps = 4/248 (1%)
Frame = -1
Query: 1779 WNIRGINRPKKQYRIRKVCKYFDVVC--LVENKVRIENYDRIVNSVFPGWNCVNNNVTGR 1606
WN+RG N + +K + L+E V+ + ++++ PGW+ V N
Sbjct: 8 WNVRGFNISSHRRGFKKWFLLNKPLFGGLIETHVKQPKEKKFISNLLPGWSFVENYEFSV 67
Query: 1605 VGRIWICWNSCNVSITTISSDQQYLFVKVEVLVHSRDKFFMSAIYGKNTASERNDLWASL 1426
+G+IW+ W+ +V + I Q + ++ +L S F +S +Y N R +LW L
Sbjct: 68 LGKIWVLWDP-SVKVVVIGRSLQMITCEL-LLPDSPSWFVVSIVYASNEEGTRKELWNEL 125
Query: 1425 LQAK*S--VMDPPWIVIGDFNVVRNMSEAVGGNPHENQAMDDFSNCIQIIDVMKMYHSGC 1252
+Q S V+ WIV+GDFN + N A+ N + + F +C+ D+ + + G
Sbjct: 126 VQLALSPVVVGRSWIVLGDFNQILNPESAINANI--GRKIRAFRSCLLDSDLYDLVYKGS 183
Query: 1251 EFTWSRNWDSQSILRVLDRVLCSKEWLHKMQGCRVHYQVPVESDHCAMDVSLYTIIALEP 1072
+TW S+ + + +DR+L + W ++ P SDH + +V L +
Sbjct: 184 SYTWWNKCSSRPLAKKIDRILVNDHWNTLFPSAYANFGEPDFSDHSSCEVVLDPAVLKAK 243
Query: 1071 RPFKYYHF 1048
RPF+++++
Sbjct: 244 RPFRFFNY 251
Score = 33.9 bits (76), Expect(3) = 4e-54
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = -3
Query: 205 LADFVGIQQSAYVPGRYISDGVLLMQDIVNEYDKK 101
L + + QSA++PGR +S+ VLL +IV+ Y+ K
Sbjct: 549 LNEVISPSQSAFLPGRLLSENVLLATEIVHGYNTK 583