BLASTX nr result
ID: Lithospermum22_contig00002898
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00002898
(1065 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAQ19327.1| bZIP-like protein [Oryza sativa Japonica Group] 76 1e-27
ref|NP_001066197.2| Os12g0156200 [Oryza sativa Japonica Group] g... 76 1e-27
gb|AAK39575.1|AC025296_10 putative reverse transcriptase [Oryza ... 75 4e-27
gb|EEC68887.1| hypothetical protein OsI_37529 [Oryza sativa Indi... 76 2e-26
gb|AAP54692.2| retrotransposon protein, putative, unclassified [... 76 3e-26
>gb|AAQ19327.1| bZIP-like protein [Oryza sativa Japonica Group]
Length = 2367
Score = 76.3 bits (186), Expect(2) = 1e-27
Identities = 39/86 (45%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Frame = +1
Query: 67 KIPGAIILRFPTLS-NFWWGSTTDIKKNIHWLSWSTLCLSKEERGLGFRDTQTFNEALLC 243
K+P ++I L+ NFWW S +K HW +W +L K GLGFRD + FN+ALL
Sbjct: 1543 KLPESVIDDLTKLTKNFWWDSMNGQRKT-HWKAWDSLTKPKSLGGLGFRDYRLFNQALLA 1601
Query: 244 KQALKLITEHNSYLSKVFKARYFPQG 321
+QA +LIT +S ++V KA+YFP G
Sbjct: 1602 RQAWRLITYPDSLCARVLKAKYFPHG 1627
Score = 73.9 bits (180), Expect(2) = 1e-27
Identities = 57/195 (29%), Positives = 92/195 (47%), Gaps = 8/195 (4%)
Frame = +3
Query: 309 FPSGRLLVASFGMKPSYRWRSILSVWDLVKQGTKW*LGNGHNINVWEHKWVTQTCGK*VI 488
FP G L+ SFG S WRSI DL+K+G W +GNG++I +W W+ + + I
Sbjct: 1624 FPHGSLIDTSFGSNSSPAWRSIEYGLDLLKKGIIWRVGNGNSIRIWRDSWLPRDHSRRPI 1683
Query: 489 TPCPDGFQSLTVVELIDFQIGVWNFGKIRSLFYHVDCDI--------AAFEGFKKSRCTL 644
T + L V + + G W+ KI F+++D ++ + E F
Sbjct: 1684 TGKAN--CRLKWVSDLITEDGSWDVPKIHQYFHNLDAEVILNICISSRSEEDFIAWHPDK 1741
Query: 645 RGL*CIRAIHSEISISVSY*DEKNS*KYNQYKFCRANVFKHIWKLKVQPKV*LFLYKVVH 824
G+ +R+ + + V+ + +S N K ++ IWK KV KV +F ++V
Sbjct: 1742 NGMFSVRSAYRLAAQLVNIEESSSSGTNNINK-----AWEMIWKCKVPQKVKIFAWRVAS 1796
Query: 825 NRLATCDNLLKRHVK 869
N LAT N KR ++
Sbjct: 1797 NCLATMVNKKKRKLE 1811
>ref|NP_001066197.2| Os12g0156200 [Oryza sativa Japonica Group]
gi|108862221|gb|ABA96496.2| retrotransposon protein,
putative, unclassified, expressed [Oryza sativa Japonica
Group] gi|255670064|dbj|BAF29216.2| Os12g0156200 [Oryza
sativa Japonica Group]
Length = 1764
Score = 76.3 bits (186), Expect(2) = 1e-27
Identities = 39/86 (45%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Frame = +1
Query: 67 KIPGAIILRFPTLS-NFWWGSTTDIKKNIHWLSWSTLCLSKEERGLGFRDTQTFNEALLC 243
K+P ++I L+ NFWW S +K HW +W +L K GLGFRD + FN+ALL
Sbjct: 940 KLPESVIDDLTKLTKNFWWDSMNGQRKT-HWKAWDSLTKPKSLGGLGFRDYRLFNQALLA 998
Query: 244 KQALKLITEHNSYLSKVFKARYFPQG 321
+QA +LIT +S ++V KA+YFP G
Sbjct: 999 RQAWRLITYPDSLCARVLKAKYFPHG 1024
Score = 73.9 bits (180), Expect(2) = 1e-27
Identities = 57/195 (29%), Positives = 92/195 (47%), Gaps = 8/195 (4%)
Frame = +3
Query: 309 FPSGRLLVASFGMKPSYRWRSILSVWDLVKQGTKW*LGNGHNINVWEHKWVTQTCGK*VI 488
FP G L+ SFG S WRSI DL+K+G W +GNG++I +W W+ + + I
Sbjct: 1021 FPHGSLIDTSFGSNSSPAWRSIEYGLDLLKKGIIWRVGNGNSIRIWRDSWLPRDHSRRPI 1080
Query: 489 TPCPDGFQSLTVVELIDFQIGVWNFGKIRSLFYHVDCDI--------AAFEGFKKSRCTL 644
T + L V + + G W+ KI F+++D ++ + E F
Sbjct: 1081 TGKAN--CRLKWVSDLITEDGSWDVPKIHQYFHNLDAEVILNICISSRSEEDFIAWHPDK 1138
Query: 645 RGL*CIRAIHSEISISVSY*DEKNS*KYNQYKFCRANVFKHIWKLKVQPKV*LFLYKVVH 824
G+ +R+ + + V+ + +S N K ++ IWK KV KV +F ++V
Sbjct: 1139 NGMFSVRSAYRLAAQLVNIEESSSSGTNNINK-----AWEMIWKCKVPQKVKIFAWRVAS 1193
Query: 825 NRLATCDNLLKRHVK 869
N LAT N KR ++
Sbjct: 1194 NCLATMVNKKKRKLE 1208
>gb|AAK39575.1|AC025296_10 putative reverse transcriptase [Oryza sativa Japonica Group]
gi|31433076|gb|AAP54636.1| retrotransposon protein,
putative, unclassified [Oryza sativa Japonica Group]
Length = 791
Score = 75.1 bits (183), Expect(2) = 4e-27
Identities = 39/86 (45%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Frame = +1
Query: 67 KIPGAIILRFPTLS-NFWWGSTTDIKKNIHWLSWSTLCLSKEERGLGFRDTQTFNEALLC 243
K+P ++I L+ NFWW S +K HW +W +L K GLGFRD FN+ALL
Sbjct: 219 KLPESVIDDLTKLTKNFWWDSMNGQRKT-HWKAWDSLTKPKSLGGLGFRDYWLFNQALLA 277
Query: 244 KQALKLITEHNSYLSKVFKARYFPQG 321
+QA +LIT +S ++V KA+YFP G
Sbjct: 278 RQAWRLITYPDSLCARVLKAKYFPHG 303
Score = 73.6 bits (179), Expect(2) = 4e-27
Identities = 57/195 (29%), Positives = 92/195 (47%), Gaps = 8/195 (4%)
Frame = +3
Query: 309 FPSGRLLVASFGMKPSYRWRSILSVWDLVKQGTKW*LGNGHNINVWEHKWVTQTCGK*VI 488
FP G L+ SFG S WRSI DL+K+G W +GNG++I +W W+ + + I
Sbjct: 300 FPHGSLIDTSFGSNSSPAWRSIEYGLDLLKKGIIWRVGNGNSIRIWRDPWLPRDHSRRPI 359
Query: 489 TPCPDGFQSLTVVELIDFQIGVWNFGKIRSLFYHVDCDI--------AAFEGFKKSRCTL 644
T + L V + + G W+ KI F+++D ++ + E F
Sbjct: 360 TGKAN--CRLKWVSDLITEDGSWDVPKIHQYFHNLDAEVILNICISSRSEEDFIAWHPDK 417
Query: 645 RGL*CIRAIHSEISISVSY*DEKNS*KYNQYKFCRANVFKHIWKLKVQPKV*LFLYKVVH 824
G+ +R+ + + V+ + +S N K ++ IWK KV KV +F ++V
Sbjct: 418 NGMFSVRSAYRLAAQLVNIEESSSSGTNNINK-----AWEMIWKCKVPQKVKIFAWRVAS 472
Query: 825 NRLATCDNLLKRHVK 869
N LAT N KR ++
Sbjct: 473 NCLATMVNKKKRKLE 487
>gb|EEC68887.1| hypothetical protein OsI_37529 [Oryza sativa Indica Group]
Length = 1765
Score = 76.3 bits (186), Expect(2) = 2e-26
Identities = 39/86 (45%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Frame = +1
Query: 67 KIPGAIILRFPTLS-NFWWGSTTDIKKNIHWLSWSTLCLSKEERGLGFRDTQTFNEALLC 243
K+P ++I L+ NFWW S +K HW +W +L K GLGFRD + FN+ALL
Sbjct: 1266 KLPESVIDDLTKLTKNFWWDSMNGQRKT-HWKAWDSLTKPKSLGGLGFRDYRLFNQALLA 1324
Query: 244 KQALKLITEHNSYLSKVFKARYFPQG 321
+QA +LIT +S ++V KA+YFP G
Sbjct: 1325 RQAWRLITYPDSLCARVLKAKYFPHG 1350
Score = 70.5 bits (171), Expect(2) = 2e-26
Identities = 54/185 (29%), Positives = 87/185 (47%), Gaps = 8/185 (4%)
Frame = +3
Query: 309 FPSGRLLVASFGMKPSYRWRSILSVWDLVKQGTKW*LGNGHNINVWEHKWVTQTCGK*VI 488
FP G L+ SFG S WRSI DL+K+G W +GNG++I +W W+ + + I
Sbjct: 1347 FPHGSLIDTSFGSNSSPAWRSIEYGLDLLKKGIIWRVGNGNSIRIWRDSWLPRDHSRRPI 1406
Query: 489 TPCPDGFQSLTVVELIDFQIGVWNFGKIRSLFYHVDCDI--------AAFEGFKKSRCTL 644
T + L V + + G W+ KI F+++D ++ + E F
Sbjct: 1407 TGKAN--CRLKWVSDLITEDGSWDVPKIHQYFHNLDAEVILNICISSRSEEDFIAWHPDK 1464
Query: 645 RGL*CIRAIHSEISISVSY*DEKNS*KYNQYKFCRANVFKHIWKLKVQPKV*LFLYKVVH 824
G+ +R+ + + V+ + +S N K ++ IWK KV KV +F ++V
Sbjct: 1465 NGMFSVRSAYRLAAQLVNIEESSSSGTNNINK-----AWEMIWKCKVPQKVKIFAWRVAS 1519
Query: 825 NRLAT 839
N LAT
Sbjct: 1520 NCLAT 1524
>gb|AAP54692.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1585
Score = 75.9 bits (185), Expect(2) = 3e-26
Identities = 36/86 (41%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Frame = +1
Query: 67 KIPGAIILRFPTLS-NFWWGSTTDIKKNIHWLSWSTLCLSKEERGLGFRDTQTFNEALLC 243
K+P ++ +L+ NFWWG+ K+ HW +W +L SK GLGF+D + FN+ALL
Sbjct: 1206 KLPESVCEDLTSLTRNFWWGAEKG-KRKTHWKAWKSLTKSKSLGGLGFKDIRLFNQALLA 1264
Query: 244 KQALKLITEHNSYLSKVFKARYFPQG 321
+QA +LI +S ++V KA+Y+P G
Sbjct: 1265 RQAWRLIDNPDSLCARVLKAKYYPNG 1290
Score = 70.1 bits (170), Expect(2) = 3e-26
Identities = 55/203 (27%), Positives = 95/203 (46%), Gaps = 8/203 (3%)
Frame = +3
Query: 309 FPSGRLLVASFGMKPSYRWRSILSVWDLVKQGTKW*LGNGHNINVWEHKWVTQTCGK*VI 488
+P+G ++ SFG S W++I +LVK+G W +GNG ++ VW+ W+ + + I
Sbjct: 1287 YPNGSIVDTSFGGNASPGWQAIEHGLELVKKGIIWRIGNGRSVRVWQDPWLPRDLSRRPI 1346
Query: 489 TPCPDGFQSLTVVELIDFQIGVWNFGKIRSLFYHVDCDIAAFEGFKKSRCTLRGL*CIRA 668
TP + + V +L+ G+W+ KI +F VD +I K R + R A
Sbjct: 1347 TP-KNNCRIKWVADLM-LDNGMWDANKINQIFLPVDVEI-----ILKLRTSSRDEEDFIA 1399
Query: 669 IHSE----ISISVSY*DEKNS*KYNQYKFCR----ANVFKHIWKLKVQPKV*LFLYKVVH 824
H + S+ +Y +N K ++ +WK V KV +F ++
Sbjct: 1400 WHPDKLGNFSVRTAYRLAENWAKEEASSSSSDVNIRKAWELLWKCNVPSKVKIFTWRATS 1459
Query: 825 NRLATCDNLLKRHVKLTYSNPTC 893
N L T DN KR+++++ + C
Sbjct: 1460 NCLPTWDNKKKRNLEISDTCVIC 1482