BLASTX nr result
ID: Lithospermum22_contig00002798
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Lithospermum22_contig00002798 (674 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002521336.1| protein with unknown function [Ricinus commu... 62 1e-07 ref|XP_002299594.1| predicted protein [Populus trichocarpa] gi|2... 62 1e-07 ref|XP_002304140.1| predicted protein [Populus trichocarpa] gi|2... 57 3e-06 dbj|BAE46416.1| TATA binding protein associated factor [Solanum ... 56 6e-06 >ref|XP_002521336.1| protein with unknown function [Ricinus communis] gi|223539414|gb|EEF41004.1| protein with unknown function [Ricinus communis] Length = 523 Score = 62.0 bits (149), Expect = 1e-07 Identities = 38/68 (55%), Positives = 44/68 (64%), Gaps = 1/68 (1%) Frame = +2 Query: 35 LHQKRLDAIHASMRPLSSNTTTSNEMGMVRQGPGGSVDANQMIRPSPSSEQL-SQLNASQ 211 LH+KRLD I A P S + T +N M+RQG G V N +IR SPSSEQL SQ +SQ Sbjct: 457 LHKKRLDMIRALREP-SHSETNNNPREMIRQGLGNPVVTNHLIRSSPSSEQLVSQSTSSQ 515 Query: 212 MLQQTT*F 235 MLQQ T F Sbjct: 516 MLQQITRF 523 >ref|XP_002299594.1| predicted protein [Populus trichocarpa] gi|222846852|gb|EEE84399.1| predicted protein [Populus trichocarpa] Length = 656 Score = 62.0 bits (149), Expect = 1e-07 Identities = 36/71 (50%), Positives = 42/71 (59%), Gaps = 1/71 (1%) Frame = +2 Query: 26 PNKLHQKRLDAIHASMRPLSSNTTTSNEMGMVRQGPGGSVDANQMIRPSPSSEQL-SQLN 202 P+ LH+KRLD I A M S N M+RQG G V N +IRPSPSSEQ+ SQ Sbjct: 586 PSDLHKKRLDMIRALMESSQSEGNNINPKEMLRQGLGNPVVTNHLIRPSPSSEQMVSQST 645 Query: 203 ASQMLQQTT*F 235 S M+QQ T F Sbjct: 646 GSPMVQQITRF 656 >ref|XP_002304140.1| predicted protein [Populus trichocarpa] gi|222841572|gb|EEE79119.1| predicted protein [Populus trichocarpa] Length = 655 Score = 57.0 bits (136), Expect = 3e-06 Identities = 33/67 (49%), Positives = 37/67 (55%), Gaps = 1/67 (1%) Frame = +2 Query: 26 PNKLHQKRLDAIHASMRPLSSNTTTSNEMGMVRQGPGGSVDANQMIRPSPSSEQL-SQLN 202 P+ LH+KRLD I A M S N M+RQG G N +IRPSPSSEQL SQ Sbjct: 555 PSDLHKKRLDMIRALMESSQSEENNINPKEMIRQGHGNPAVTNHLIRPSPSSEQLVSQST 614 Query: 203 ASQMLQQ 223 S M Q Sbjct: 615 GSPMSAQ 621 >dbj|BAE46416.1| TATA binding protein associated factor [Solanum tuberosum] Length = 638 Score = 56.2 bits (134), Expect = 6e-06 Identities = 33/78 (42%), Positives = 45/78 (57%), Gaps = 1/78 (1%) Frame = +2 Query: 5 KRHPDHQPNKLHQKRLDAIHASMRPLSSNTTT-SNEMGMVRQGPGGSVDANQMIRPSPSS 181 K +P++ + LH+KRLD I M + T+T S+ VR G G ++N MIRP S Sbjct: 564 KHYPENSSSDLHKKRLDVIRTLMETSQTETSTNSSAKETVRPGAG---ESNHMIRPPSSD 620 Query: 182 EQLSQLNASQMLQQTT*F 235 +SQ NASQML + T F Sbjct: 621 NMVSQSNASQMLHEMTRF 638