BLASTX nr result

ID: Lithospermum22_contig00002798 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00002798
         (674 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521336.1| protein with unknown function [Ricinus commu...    62   1e-07
ref|XP_002299594.1| predicted protein [Populus trichocarpa] gi|2...    62   1e-07
ref|XP_002304140.1| predicted protein [Populus trichocarpa] gi|2...    57   3e-06
dbj|BAE46416.1| TATA binding protein associated factor [Solanum ...    56   6e-06

>ref|XP_002521336.1| protein with unknown function [Ricinus communis]
           gi|223539414|gb|EEF41004.1| protein with unknown
           function [Ricinus communis]
          Length = 523

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 38/68 (55%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
 Frame = +2

Query: 35  LHQKRLDAIHASMRPLSSNTTTSNEMGMVRQGPGGSVDANQMIRPSPSSEQL-SQLNASQ 211
           LH+KRLD I A   P S + T +N   M+RQG G  V  N +IR SPSSEQL SQ  +SQ
Sbjct: 457 LHKKRLDMIRALREP-SHSETNNNPREMIRQGLGNPVVTNHLIRSSPSSEQLVSQSTSSQ 515

Query: 212 MLQQTT*F 235
           MLQQ T F
Sbjct: 516 MLQQITRF 523


>ref|XP_002299594.1| predicted protein [Populus trichocarpa] gi|222846852|gb|EEE84399.1|
           predicted protein [Populus trichocarpa]
          Length = 656

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 36/71 (50%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
 Frame = +2

Query: 26  PNKLHQKRLDAIHASMRPLSSNTTTSNEMGMVRQGPGGSVDANQMIRPSPSSEQL-SQLN 202
           P+ LH+KRLD I A M    S     N   M+RQG G  V  N +IRPSPSSEQ+ SQ  
Sbjct: 586 PSDLHKKRLDMIRALMESSQSEGNNINPKEMLRQGLGNPVVTNHLIRPSPSSEQMVSQST 645

Query: 203 ASQMLQQTT*F 235
            S M+QQ T F
Sbjct: 646 GSPMVQQITRF 656


>ref|XP_002304140.1| predicted protein [Populus trichocarpa] gi|222841572|gb|EEE79119.1|
           predicted protein [Populus trichocarpa]
          Length = 655

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 33/67 (49%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
 Frame = +2

Query: 26  PNKLHQKRLDAIHASMRPLSSNTTTSNEMGMVRQGPGGSVDANQMIRPSPSSEQL-SQLN 202
           P+ LH+KRLD I A M    S     N   M+RQG G     N +IRPSPSSEQL SQ  
Sbjct: 555 PSDLHKKRLDMIRALMESSQSEENNINPKEMIRQGHGNPAVTNHLIRPSPSSEQLVSQST 614

Query: 203 ASQMLQQ 223
            S M  Q
Sbjct: 615 GSPMSAQ 621


>dbj|BAE46416.1| TATA binding protein associated factor [Solanum tuberosum]
          Length = 638

 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 33/78 (42%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
 Frame = +2

Query: 5   KRHPDHQPNKLHQKRLDAIHASMRPLSSNTTT-SNEMGMVRQGPGGSVDANQMIRPSPSS 181
           K +P++  + LH+KRLD I   M    + T+T S+    VR G G   ++N MIRP  S 
Sbjct: 564 KHYPENSSSDLHKKRLDVIRTLMETSQTETSTNSSAKETVRPGAG---ESNHMIRPPSSD 620

Query: 182 EQLSQLNASQMLQQTT*F 235
             +SQ NASQML + T F
Sbjct: 621 NMVSQSNASQMLHEMTRF 638


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