BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00002707
         (1396 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABU45190.1| unknown [Capsicum frutescens]                          607   e-171
sp|Q9ZR40.1|U2A2B_NICPL RecName: Full=Splicing factor U2af large...   603   e-170
gb|AEI98617.1| hypothetical protein 111O18.4 [Coffea canephora]       603   e-170
gb|ABU45209.1| unknown [Solanum bulbocastanum]                        600   e-169
ref|XP_002271463.2| PREDICTED: splicing factor U2af large subuni...   599   e-169

>gb|ABU45190.1| unknown [Capsicum frutescens]
          Length = 551

 Score =  607 bits (1566), Expect = e-171
 Identities = 298/379 (78%), Positives = 336/379 (88%), Gaps = 1/379 (0%)
 Frame = +3

Query: 3    GQVSGAAPAFPGLFPSMLPLS-GQFGTLPVMPVQAMTQQATRHARRVYVGGLSPSANEQA 179
            GQV GA P+ PG+F +M PL+ GQFG LP+MPVQAMTQQATRHARRVYVGGL P+ANEQ+
Sbjct: 173  GQVPGANPSIPGMFSNMFPLAAGQFGALPIMPVQAMTQQATRHARRVYVGGLPPTANEQS 232

Query: 180  VSTFFSHVMLAIGGNTAGPGDSVVNVYINHDKKFAFVEMRSVEEASNAMALDGIIFEGAP 359
            V+TFFSHVM AIGGNTAGPGD+VVNVYINH+KKFAFVEMRSVEEASNAMALDG+IFEG P
Sbjct: 233  VATFFSHVMYAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGVIFEGGP 292

Query: 360  VKVRRPTDYNPALAATLGPSQPNPNLNLAAVGLAPGSTGVLEGPDRIFVGGVPYYFTDAQ 539
            VKVRRP+DYNP+LAATLGPSQP+PNLNLAAVGL PGS+G LEGPDRIFVGG+PYYFT++Q
Sbjct: 293  VKVRRPSDYNPSLAATLGPSQPSPNLNLAAVGLTPGSSGGLEGPDRIFVGGLPYYFTESQ 352

Query: 540  IRELLESFGSLKGFNLVKDRETGNSKGYAFCVYQDTSVTDIACAALNGIKLGDKTLTVRR 719
            IRELLESFG L+GF+LVKDRETGNSKGYAFCVYQD SVTDIACAALNGIK+GDKTLTVRR
Sbjct: 353  IRELLESFGQLRGFDLVKDRETGNSKGYAFCVYQDVSVTDIACAALNGIKMGDKTLTVRR 412

Query: 720  ANQGTIEPKPEQESIXXXXXXXXXXXXXXXXXXXXXXTKVLCLTQVVQPEELMEDEDYED 899
            ANQGT +P PEQES+                      TKVLCLTQVV  +EL +D+DY+D
Sbjct: 413  ANQGTNQPNPEQESV-LLHAQQQIALQRFMLQPGALATKVLCLTQVVSVDELNDDDDYQD 471

Query: 900  ILEDMKVECGKFGTLVNVVIPRPNSTGEPTPGVGKVFLEYADVESSSKARQGLNGRKFGG 1079
            ILEDM+VECGKFG+L+NVVIPRPN +GEPTPG+GKVFLEYADVESSS+ARQGLNGRKFGG
Sbjct: 472  ILEDMRVECGKFGSLLNVVIPRPNPSGEPTPGLGKVFLEYADVESSSRARQGLNGRKFGG 531

Query: 1080 NQVVAVFYPENKFAQREYD 1136
            N+V+AVFYPENKF++ EY+
Sbjct: 532  NEVIAVFYPENKFSEGEYE 550


>sp|Q9ZR40.1|U2A2B_NICPL RecName: Full=Splicing factor U2af large subunit B; AltName:
            Full=NpU2AF65b; AltName: Full=U2 auxiliary factor 65 kDa
            subunit B; AltName: Full=U2 small nuclear
            ribonucleoprotein auxiliary factor large subunit B;
            Short=U2 snRNP auxiliary factor large subunit B
            gi|3850821|emb|CAA77135.1| U2 snRNP auxiliary factor,
            large subunit [Nicotiana plumbaginifolia]
          Length = 573

 Score =  603 bits (1556), Expect = e-170
 Identities = 301/380 (79%), Positives = 330/380 (86%), Gaps = 1/380 (0%)
 Frame = +3

Query: 3    GQVSGAAPAFPGLFPSMLPL-SGQFGTLPVMPVQAMTQQATRHARRVYVGGLSPSANEQA 179
            GQV G  P  PG+FP+M PL SGQFG LPVMP+QAMTQQATRHARRVYVGGL   ANEQ+
Sbjct: 195  GQVPGTNPPIPGMFPNMFPLASGQFGALPVMPIQAMTQQATRHARRVYVGGLPAHANEQS 254

Query: 180  VSTFFSHVMLAIGGNTAGPGDSVVNVYINHDKKFAFVEMRSVEEASNAMALDGIIFEGAP 359
            V+TFFSHVM AIGGNTAGPGD+VVNVYIN++KKFAFVEMRSVEEASNAMALDGIIFEGAP
Sbjct: 255  VATFFSHVMSAIGGNTAGPGDAVVNVYINYEKKFAFVEMRSVEEASNAMALDGIIFEGAP 314

Query: 360  VKVRRPTDYNPALAATLGPSQPNPNLNLAAVGLAPGSTGVLEGPDRIFVGGVPYYFTDAQ 539
             KVRRP+DYNP+LAATLGPSQPNPNLNLAAVGL+PGS G LEGPDRIFVGG+PYYFT+AQ
Sbjct: 315  CKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLSPGSAGGLEGPDRIFVGGLPYYFTEAQ 374

Query: 540  IRELLESFGSLKGFNLVKDRETGNSKGYAFCVYQDTSVTDIACAALNGIKLGDKTLTVRR 719
            IRELLESFG L+GF+LVKDRETGNSKGYAFCVYQD SVTDIACAALNGIK+GDKTLTVRR
Sbjct: 375  IRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDVSVTDIACAALNGIKMGDKTLTVRR 434

Query: 720  ANQGTIEPKPEQESIXXXXXXXXXXXXXXXXXXXXXXTKVLCLTQVVQPEELMEDEDYED 899
            ANQGT +PKPEQES+                      TKVL LT+V+  +EL +DEDY+D
Sbjct: 435  ANQGTTQPKPEQESV-LLHAQQQIALQRLMLQPATLATKVLSLTEVISADELNDDEDYQD 493

Query: 900  ILEDMKVECGKFGTLVNVVIPRPNSTGEPTPGVGKVFLEYADVESSSKARQGLNGRKFGG 1079
            ILEDM+ ECGKFG+LVNVVIPRP+  GEPTPGVGKVFLEYADV+SSSKARQ LNGRKFGG
Sbjct: 494  ILEDMRTECGKFGSLVNVVIPRPSPNGEPTPGVGKVFLEYADVDSSSKARQSLNGRKFGG 553

Query: 1080 NQVVAVFYPENKFAQREYDG 1139
            NQVVAVFYPENKF + +YDG
Sbjct: 554  NQVVAVFYPENKFYEGDYDG 573


>gb|AEI98617.1| hypothetical protein 111O18.4 [Coffea canephora]
          Length = 570

 Score =  603 bits (1555), Expect = e-170
 Identities = 302/379 (79%), Positives = 334/379 (88%), Gaps = 1/379 (0%)
 Frame = +3

Query: 6    QVSGAAPAFPGLFPSMLPL-SGQFGTLPVMPVQAMTQQATRHARRVYVGGLSPSANEQAV 182
            QV+GAAPA PG+FP+M  L +GQ G LPVMPVQAMTQQATRHARRVYVGGL P+ANEQ+V
Sbjct: 194  QVTGAAPAVPGVFPNMFSLPTGQLGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSV 253

Query: 183  STFFSHVMLAIGGNTAGPGDSVVNVYINHDKKFAFVEMRSVEEASNAMALDGIIFEGAPV 362
            +TFFSHVM AIGGNTAGPGD+VVNVYINH+KKFAFVEMRSVEEASNAMALDGIIFEGAPV
Sbjct: 254  ATFFSHVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPV 313

Query: 363  KVRRPTDYNPALAATLGPSQPNPNLNLAAVGLAPGSTGVLEGPDRIFVGGVPYYFTDAQI 542
            KVRRP+DYNP+LAATLGPSQPNPNLNLAAVGL PGS G LEGPDRIFVGG+PYYFT+ QI
Sbjct: 314  KVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEGQI 373

Query: 543  RELLESFGSLKGFNLVKDRETGNSKGYAFCVYQDTSVTDIACAALNGIKLGDKTLTVRRA 722
            RELLESFG L+GF+LVKDRETGNSKGYAFCVYQD SVTDIACAALNGIK+GDKTLTVRRA
Sbjct: 374  RELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRA 433

Query: 723  NQGTIEPKPEQESIXXXXXXXXXXXXXXXXXXXXXXTKVLCLTQVVQPEELMEDEDYEDI 902
            NQG  +PKPEQES+                      TKVLCLTQVV  +EL +DEDY DI
Sbjct: 434  NQGVTQPKPEQESV-LLHAQQQIALQKLMLQPGTLATKVLCLTQVVSADELRDDEDYADI 492

Query: 903  LEDMKVECGKFGTLVNVVIPRPNSTGEPTPGVGKVFLEYADVESSSKARQGLNGRKFGGN 1082
            LEDM++ECGKF TLVN+VIPRP+ TG+PTPGVGKVFLEYADVES++KARQGL+GR+FGGN
Sbjct: 493  LEDMRLECGKF-TLVNLVIPRPSPTGDPTPGVGKVFLEYADVESANKARQGLHGRRFGGN 551

Query: 1083 QVVAVFYPENKFAQREYDG 1139
            QVVAVFYPEN+F+Q +YDG
Sbjct: 552  QVVAVFYPENRFSQGDYDG 570


>gb|ABU45209.1| unknown [Solanum bulbocastanum]
          Length = 558

 Score =  600 bits (1548), Expect = e-169
 Identities = 294/380 (77%), Positives = 333/380 (87%), Gaps = 2/380 (0%)
 Frame = +3

Query: 3    GQVSGAA-PAFPGLFPSMLPLS-GQFGTLPVMPVQAMTQQATRHARRVYVGGLSPSANEQ 176
            GQV G   P+ PG+F +M PL+ GQFG LP+MPVQAMTQQATRHARRVYVGGL P+ANEQ
Sbjct: 179  GQVPGTTNPSIPGMFSNMFPLAAGQFGALPIMPVQAMTQQATRHARRVYVGGLPPTANEQ 238

Query: 177  AVSTFFSHVMLAIGGNTAGPGDSVVNVYINHDKKFAFVEMRSVEEASNAMALDGIIFEGA 356
            +V+TFFSHVM AIGGNTAGPGD+VVNVYINH+KKFAFVEMRSVEEASNAMALDG++FEG 
Sbjct: 239  SVATFFSHVMYAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGVVFEGG 298

Query: 357  PVKVRRPTDYNPALAATLGPSQPNPNLNLAAVGLAPGSTGVLEGPDRIFVGGVPYYFTDA 536
            PVKVRRP+DYNP+LAATLGPSQP+PNLNLAAVGL PGS+G LEGPDRIFVGG+PYYFT++
Sbjct: 299  PVKVRRPSDYNPSLAATLGPSQPSPNLNLAAVGLTPGSSGGLEGPDRIFVGGLPYYFTES 358

Query: 537  QIRELLESFGSLKGFNLVKDRETGNSKGYAFCVYQDTSVTDIACAALNGIKLGDKTLTVR 716
            QIRELLESFG L+GF+LVKDRETGNSKGYAFCVYQD SVTDIACAALNGIK+GDKTLTVR
Sbjct: 359  QIRELLESFGQLRGFDLVKDRETGNSKGYAFCVYQDVSVTDIACAALNGIKMGDKTLTVR 418

Query: 717  RANQGTIEPKPEQESIXXXXXXXXXXXXXXXXXXXXXXTKVLCLTQVVQPEELMEDEDYE 896
            RANQGT +P PEQES+                      TKVLCLT+VV  +EL +D+DY+
Sbjct: 419  RANQGTTQPNPEQESV-LLHAQQQIALQRFMLQPGALATKVLCLTEVVSVDELKDDDDYQ 477

Query: 897  DILEDMKVECGKFGTLVNVVIPRPNSTGEPTPGVGKVFLEYADVESSSKARQGLNGRKFG 1076
            DILEDM++ECGKFG L+NVVIPRPN  GEPTPG+GKVFLEYADV+SSSKARQGLNGRKFG
Sbjct: 478  DILEDMRIECGKFGALLNVVIPRPNPNGEPTPGLGKVFLEYADVDSSSKARQGLNGRKFG 537

Query: 1077 GNQVVAVFYPENKFAQREYD 1136
            GNQV+AVFYPENKF++ +Y+
Sbjct: 538  GNQVIAVFYPENKFSEGDYE 557


>ref|XP_002271463.2| PREDICTED: splicing factor U2af large subunit B-like [Vitis vinifera]
          Length = 568

 Score =  599 bits (1544), Expect = e-169
 Identities = 297/380 (78%), Positives = 327/380 (86%), Gaps = 1/380 (0%)
 Frame = +3

Query: 3    GQVSGAAPAFPGLFPSMLPL-SGQFGTLPVMPVQAMTQQATRHARRVYVGGLSPSANEQA 179
            GQ+ G  P  PG+FP+M PL SGQFG LPVMPVQAMTQQATRHARRVYVGGLSP+ANEQ+
Sbjct: 190  GQIPGTTPTIPGMFPNMFPLASGQFGALPVMPVQAMTQQATRHARRVYVGGLSPTANEQS 249

Query: 180  VSTFFSHVMLAIGGNTAGPGDSVVNVYINHDKKFAFVEMRSVEEASNAMALDGIIFEGAP 359
            V+TFFS VM AIGGNTAGPGD+VVNVYINH+KKFAFVEMRSVEEASNAMALDGIIFEGAP
Sbjct: 250  VATFFSQVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAP 309

Query: 360  VKVRRPTDYNPALAATLGPSQPNPNLNLAAVGLAPGSTGVLEGPDRIFVGGVPYYFTDAQ 539
            VKVRRP+DYNP+LAATLGPSQPNPNLNLAAVGL PGS G LEGPDRIFVGG+PYYFT+AQ
Sbjct: 310  VKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQ 369

Query: 540  IRELLESFGSLKGFNLVKDRETGNSKGYAFCVYQDTSVTDIACAALNGIKLGDKTLTVRR 719
            IRELLESFG L+GF+LVKDRETGNSKGYAFCVYQD SVTDIACAALNGIK+GDKTLTVRR
Sbjct: 370  IRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRR 429

Query: 720  ANQGTIEPKPEQESIXXXXXXXXXXXXXXXXXXXXXXTKVLCLTQVVQPEELMEDEDYED 899
            ANQG  +PKPEQE++                      TKV+CLTQVV  +EL +DE YED
Sbjct: 430  ANQGASQPKPEQENV-LLHAQQQIALQRLMFQPGALATKVVCLTQVVNADELQDDEAYED 488

Query: 900  ILEDMKVECGKFGTLVNVVIPRPNSTGEPTPGVGKVFLEYADVESSSKARQGLNGRKFGG 1079
            I+EDM++E GKFG LVNV IPRP   GEPTPG+GKVFLEYAD++ ++KAR GLNGRKF G
Sbjct: 489  IVEDMRIEGGKFGNLVNVAIPRPKPNGEPTPGLGKVFLEYADIDGATKARTGLNGRKFDG 548

Query: 1080 NQVVAVFYPENKFAQREYDG 1139
            NQVVAVFYPENKF+Q EYDG
Sbjct: 549  NQVVAVFYPENKFSQGEYDG 568