BLASTX nr result

ID: Lithospermum22_contig00002664 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00002664
         (1104 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA46782.1| unknown [Solanum tuberosum]                            264   3e-68
ref|XP_004139049.1| PREDICTED: RNA-binding protein 8A-like [Cucu...   254   3e-65
ref|XP_002281228.1| PREDICTED: RNA-binding protein 8A [Vitis vin...   244   4e-62
ref|XP_002513523.1| polyadenylate-binding protein, putative [Ric...   243   5e-62
ref|XP_002894321.1| hypothetical protein ARALYDRAFT_892123 [Arab...   239   1e-60

>gb|ABA46782.1| unknown [Solanum tuberosum]
          Length = 195

 Score =  264 bits (674), Expect = 3e-68
 Identities = 134/172 (77%), Positives = 146/172 (84%), Gaps = 4/172 (2%)
 Frame = +3

Query: 204 MADIEGEAVDFEAEEDDLMDEEVQEDE--RAHIPRLKSAIAGGA--APKKTKGRGFREEA 371
           MA+ E EAVDFE EEDDLMDE+V      RA IP+LKSAI GG+  APKKTKGRGFREEA
Sbjct: 1   MANAEVEAVDFEPEEDDLMDEDVDASSSPRATIPKLKSAITGGSSSAPKKTKGRGFREEA 60

Query: 372 HVDDRNARLSGRFDSLDSHGGPGPERSIEGWIILVTGVHEEAQEDDLHNEFGEFGEIKNL 551
              DRNAR+S RFDSLDS GGPGPERSIEGWI+LVTGV+EE QEDDLHN+FGEFGEIKNL
Sbjct: 61  AEADRNARMSARFDSLDSEGGPGPERSIEGWIVLVTGVNEETQEDDLHNDFGEFGEIKNL 120

Query: 552 HLNLDRRTGFVKGYALIEYESFEEAQKAINAMDGGELLTQLINVDWAFSKGP 707
           HLNLDRRTGFVKGYA IEYESFEEAQ+AI+  DG E LTQ I+V WAFS+GP
Sbjct: 121 HLNLDRRTGFVKGYAFIEYESFEEAQRAISEKDGAEFLTQTIHVAWAFSRGP 172


>ref|XP_004139049.1| PREDICTED: RNA-binding protein 8A-like [Cucumis sativus]
          Length = 197

 Score =  254 bits (648), Expect = 3e-65
 Identities = 136/180 (75%), Positives = 145/180 (80%), Gaps = 11/180 (6%)
 Frame = +3

Query: 204 MADIEGEAVDFEAEEDDLMDE----EVQEDERAHIPRLKSAIAGGAA------PKKTKGR 353
           MA  + EAVDFE EEDDLMDE    E     RA  P+LKSAI GGA+      PKKTKGR
Sbjct: 1   MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLSGGPKKTKGR 60

Query: 354 GFREEAHVDDRNARLSGR-FDSLDSHGGPGPERSIEGWIILVTGVHEEAQEDDLHNEFGE 530
           GFREE+   DRN RL+G  FDSL S  GPGP+RSIEGWIILVTGVHEEAQEDDL N FGE
Sbjct: 61  GFREES---DRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGE 117

Query: 531 FGEIKNLHLNLDRRTGFVKGYALIEYESFEEAQKAINAMDGGELLTQLINVDWAFSKGPI 710
           FGEIKNLHLNLDRRTGFVKGYALIEYESFEEA+KAI+AMDG ELLTQ+INVDWAFS GPI
Sbjct: 118 FGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPI 177


>ref|XP_002281228.1| PREDICTED: RNA-binding protein 8A [Vitis vinifera]
           gi|296088561|emb|CBI37552.3| unnamed protein product
           [Vitis vinifera]
          Length = 202

 Score =  244 bits (622), Expect = 4e-62
 Identities = 129/180 (71%), Positives = 144/180 (80%), Gaps = 12/180 (6%)
 Frame = +3

Query: 204 MADIEGEAVDFEAEEDDLMDEEVQED-----ERAHIPRLKSAIAGGA------APKKTKG 350
           MA  + EAVDFE E+DDLMDE+   D      RA +P+LKSAI GGA      APKKTKG
Sbjct: 1   MASADVEAVDFEPEDDDLMDEDGAVDVDNSSPRAPLPKLKSAITGGAPSSLAAAPKKTKG 60

Query: 351 RGFREEAHVDDRNARLSGR-FDSLDSHGGPGPERSIEGWIILVTGVHEEAQEDDLHNEFG 527
           RGFR++   D RN+R + R FDSLDS GGPGP+RSIEGWIILVTGVHEEAQEDDL N FG
Sbjct: 61  RGFRDDTDAD-RNSRFAARDFDSLDSDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFG 119

Query: 528 EFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAQKAINAMDGGELLTQLINVDWAFSKGP 707
           EFGE+KNLHLNLDRRTGFVKGYALIEYE+ EEAQ AI+AM+G ELLTQ I+VDWAFS GP
Sbjct: 120 EFGEVKNLHLNLDRRTGFVKGYALIEYENLEEAQAAISAMNGTELLTQTISVDWAFSNGP 179


>ref|XP_002513523.1| polyadenylate-binding protein, putative [Ricinus communis]
           gi|223547431|gb|EEF48926.1| polyadenylate-binding
           protein, putative [Ricinus communis]
          Length = 199

 Score =  243 bits (621), Expect = 5e-62
 Identities = 129/179 (72%), Positives = 143/179 (79%), Gaps = 11/179 (6%)
 Frame = +3

Query: 204 MADIEGEAVDFEAEEDDLMDEEVQEDE----RAHIPRLKSAIAGGAA-----PKKTKGRG 356
           MA+ + EAVDFE EEDDLMDE+   D     RA +P+LKSAI GGAA     P+KTKGRG
Sbjct: 1   MANADAEAVDFEPEEDDLMDEDGGVDADASPRAPLPKLKSAITGGAASSLSAPRKTKGRG 60

Query: 357 FREEAHVDDRNARLSGR--FDSLDSHGGPGPERSIEGWIILVTGVHEEAQEDDLHNEFGE 530
           FREEA  D R  RL+ R  FDSL + GGPGP+RSIEGWIILVTGVHEEAQEDDL N FG+
Sbjct: 61  FREEADAD-RQTRLASRGDFDSLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGD 119

Query: 531 FGEIKNLHLNLDRRTGFVKGYALIEYESFEEAQKAINAMDGGELLTQLINVDWAFSKGP 707
           FGEIKNLHLNLDRRTGFVKGYALIEYE FEEAQ AI +++G ELLTQ+INVDWAF  GP
Sbjct: 120 FGEIKNLHLNLDRRTGFVKGYALIEYEKFEEAQNAIASLNGTELLTQIINVDWAFCNGP 178


>ref|XP_002894321.1| hypothetical protein ARALYDRAFT_892123 [Arabidopsis lyrata subsp.
           lyrata] gi|297340163|gb|EFH70580.1| hypothetical protein
           ARALYDRAFT_892123 [Arabidopsis lyrata subsp. lyrata]
          Length = 201

 Score =  239 bits (609), Expect = 1e-60
 Identities = 129/177 (72%), Positives = 142/177 (80%), Gaps = 9/177 (5%)
 Frame = +3

Query: 204 MADIEGEAVDFEAEEDDLMDEE------VQEDERAHIPRLKSAIAG--GAAPKKTKGRGF 359
           MA+IE EAVDFE EEDDLMDE+           RA  PRLKSAIAG  G + KKTKGRGF
Sbjct: 1   MANIESEAVDFEPEEDDLMDEDGTAIDGADVSPRAGHPRLKSAIAGANGESAKKTKGRGF 60

Query: 360 REEAHVDDRNARLSGR-FDSLDSHGGPGPERSIEGWIILVTGVHEEAQEDDLHNEFGEFG 536
           REE    DR  RLS R F+SL S GG GP+RSIEGWIILV+GVHEEAQEDDL N FG+FG
Sbjct: 61  REEKD-SDRQRRLSSRDFESLGSDGGRGPQRSIEGWIILVSGVHEEAQEDDLTNAFGDFG 119

Query: 537 EIKNLHLNLDRRTGFVKGYALIEYESFEEAQKAINAMDGGELLTQLINVDWAFSKGP 707
           EIKNLHLNLDRRTGFVKGYALIEYE +EEAQKAI+AM+G ELLTQ ++VDWAFS+GP
Sbjct: 120 EIKNLHLNLDRRTGFVKGYALIEYEKYEEAQKAISAMNGAELLTQNVSVDWAFSRGP 176


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