BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00002650
         (2934 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containi...  1051   0.0  
ref|XP_002515260.1| pentatricopeptide repeat-containing protein,...  1006   0.0  
ref|XP_004135985.1| PREDICTED: pentatricopeptide repeat-containi...   997   0.0  
ref|XP_004166285.1| PREDICTED: pentatricopeptide repeat-containi...   996   0.0  
ref|NP_180698.1| genomes uncoupled 1 protein [Arabidopsis thalia...   925   0.0  

>ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
            chloroplastic [Vitis vinifera]
          Length = 867

 Score = 1051 bits (2719), Expect = 0.0
 Identities = 547/875 (62%), Positives = 648/875 (74%), Gaps = 11/875 (1%)
 Frame = +2

Query: 131  MASSTPPPNYTLTTSKPYQNHHFHHLKNNQTTTTKPNSRWSSQKVTLXXXXXXXXXXXXX 310
            MAS TPP + ++T +KPYQN H+     N T     N  WSS KV+L             
Sbjct: 1    MASPTPP-HCSITAAKPYQNLHY---PQNPTKNHHNNHHWSSHKVSLTNPLPSPRNAAKP 56

Query: 311  XXXXXXXXXXXXXXXXXXXXXXXX------DFSVRRSTRFVSKMHFGRPKFXXXXXXXXX 472
                                          DFS RRSTRFVSKMHFGRPK          
Sbjct: 57   GAASPATATNRNSNFPSLSPLPPSKSELTADFSGRRSTRFVSKMHFGRPKTAAAARHTST 116

Query: 473  XEEVLEQALRFRGDDSGVENLLLNFGSRLCGSDDFTFLFRELGNRGELGLAMRCFEFAIL 652
             EE L  A+RF  DD G++++LLNF SRLCGSDD+TFL RELGNRGE   A+RCFEFA+ 
Sbjct: 117  AEEALRHAIRFASDDKGIDSVLLNFESRLCGSDDYTFLLRELGNRGEWAKAIRCFEFAVR 176

Query: 653  REKRRSELGKLASSMISILGRLGKVELAEKIFKNAVNEGYGNTVYAYSALISAYAKSGYC 832
            RE+RR+E GKLAS+MISILGRLG+VELA+ +F+ A+NEGYGNTVYA+SALISAY +SGYC
Sbjct: 177  REQRRNEQGKLASAMISILGRLGQVELAKNVFETALNEGYGNTVYAFSALISAYGRSGYC 236

Query: 833  DEALRVFGVMKDSGLKPNIVTYNALIDACGKGGVGFKRASEIFDDMLKTGVQPDRITFNS 1012
            DEA++VF  MK SGLKPN+VTYNA+IDACGKGGV F RA+EIFD+ML+ GVQPDRITFNS
Sbjct: 237  DEAIKVFETMKSSGLKPNLVTYNAVIDACGKGGVDFNRAAEIFDEMLRNGVQPDRITFNS 296

Query: 1013 LLAVCSGAGLWETARDLFHEMVYRGIDQDIYTYNTLLDTACNSSHIDAAFDIMSEMPTKG 1192
            LLAVC   GLWE AR+LF EM+YRGI+QDI+TYNTLLD  C    +D AF IMSEMP K 
Sbjct: 297  LLAVCGRGGLWEAARNLFSEMLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKH 356

Query: 1193 IFPNEVTFSTMVRGCAKAGRFEKALSLFNEMKDIGIKLDRVAYNTLVAIYANLGRFDEAL 1372
            I PN VT+ST++ G AKAGR ++AL+LFNEMK   I LDRV+YNTL++IYA LGRF+EAL
Sbjct: 357  IMPNVVTYSTVIDGYAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEAL 416

Query: 1373 SVFQEMETIGFKKDVVTYNALLDGFGKQGMYGKVKDLFQEMKAQNVSPNLLTYSTLISVY 1552
            +V +EME+ G KKD VTYNALL G+GKQG Y +VK +F+EMKA+ + PNLLTYSTLI VY
Sbjct: 417  NVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVY 476

Query: 1553 SKGGLCLEAMEVYKEFKNRGLKADVVFYSKLIDSLCKKGLLESSVMLLDKMMKEGINPNV 1732
            SKGGL  EAMEV++EFK  GLKADVV YS LID+LCK GL+ES+V  LD+M KEGI PNV
Sbjct: 477  SKGGLYQEAMEVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNV 536

Query: 1733 VTYNSIINAFGQSTTADYSLHHEQWT-----GSSELTLASGSAEPSANNEEGDKIVRILA 1897
            VTYNSII+AFG+S +A+  +     T      SS L +   + E    ++E ++I++I  
Sbjct: 537  VTYNSIIDAFGRSGSAECVIDPPYETNVSKMSSSSLKVVEDATESEVGDKEDNQIIKIFG 596

Query: 1898 QLLPGKSGADKKGITSGQDLVCILQVLHKMHELGIKPNVVTFSAIINACSRCXXXXXXXX 2077
            QL   K+   KK     Q+++CIL V HKMHEL IKPNVVTFSAI+NACSRC        
Sbjct: 597  QLAAEKTCHAKKENRGRQEILCILAVFHKMHELDIKPNVVTFSAILNACSRCNSFEDASM 656

Query: 2078 XXXXXRLFDNQVYGVAHGLLMGLHENVWFQALSLFDEMKGMDSSTASAFYNALTDVLWHF 2257
                 RLFDNQVYGVAHGLLMG  +NVW QA SLFDE+K MDSSTASAFYNALTD+LWHF
Sbjct: 657  LLEELRLFDNQVYGVAHGLLMGYGDNVWVQAQSLFDEVKQMDSSTASAFYNALTDMLWHF 716

Query: 2258 GQKHGAQLVVLEGQRRDVWPHAWSSSCLDLHLMSSGAARAMVHAWLLNIRSIVFEGQELP 2437
            GQ+ GAQLVVLEG+RR VW + WS+SCLDLHLMSSGAARAMVHAWLLNIRSIVFEG ELP
Sbjct: 717  GQRRGAQLVVLEGKRRHVWENMWSNSCLDLHLMSSGAARAMVHAWLLNIRSIVFEGHELP 776

Query: 2438 KLLSILTGWGKHSKVVGEGALKRTVEALLISIGAPFQLAKSNIGRFTSPGAVVTAWLRES 2617
            +LLSILTGWGKHSKVVG+GAL+R +EALL  +GAPF++AK N+GRF S GAVV AWLRES
Sbjct: 777  QLLSILTGWGKHSKVVGDGALRRAIEALLTGMGAPFRVAKCNLGRFISTGAVVAAWLRES 836

Query: 2618 CTLKVLVLQDERIHPKSVQTSKLPLLPSTNLGTVP 2722
             TLKVLVL D+R +P   + S++     +NL T+P
Sbjct: 837  GTLKVLVLHDDRTNPDRARCSQI-----SNLQTLP 866


>ref|XP_002515260.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223545740|gb|EEF47244.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 878

 Score = 1006 bits (2601), Expect = 0.0
 Identities = 528/871 (60%), Positives = 632/871 (72%), Gaps = 18/871 (2%)
 Frame = +2

Query: 140  STPPPNYTLTTSKPYQNHHF--HHLKNNQTTTTKPNSRWSSQKVTLXXXXXXXXXXXXXX 313
            ++ PP+ ++T +KPYQNH +  +HLKN++ T    + RW++QKV+L              
Sbjct: 2    ASTPPHCSITATKPYQNHQYPQNHLKNHRQTH---HHRWTNQKVSLTKPPLAPSPCNAPK 58

Query: 314  XXXXXXXXXXXXXXXXXXXXXXX-----------DFSVRRSTRFVSKMHFGRPKFXXXXX 460
                                              DFS RRSTRFVSK+HFGRPK      
Sbjct: 59   AAAAAAAATTTHHTPNPTFHSLSPLQSQKSDLSADFSGRRSTRFVSKLHFGRPKTNMNRH 118

Query: 461  XXXXXEEVLEQALRFRGDDSGVENLLLNFGSRLCGSDDFTFLFRELGNRGELGLAMRCFE 640
                 E  L+Q +++  DD  +EN+LLNF SRLCG DD+TFL RELGNRG+   A+RCFE
Sbjct: 119  TSVALE-ALQQVIQYGKDDKALENVLLNFESRLCGPDDYTFLLRELGNRGDSAKAVRCFE 177

Query: 641  FAILREKRRSELGKLASSMISILGRLGKVELAEKIFKNAVNEGYGNTVYAYSALISAYAK 820
            FA+ RE  ++E GKLAS+MIS LGRLGKVELA+ +F  A+ EGYG TVYA+SALISAY +
Sbjct: 178  FAVRRESGKNEQGKLASAMISTLGRLGKVELAKAVFDTALKEGYGKTVYAFSALISAYGR 237

Query: 821  SGYCDEALRVFGVMKDSGLKPNIVTYNALIDACGKGGVGFKRASEIFDDMLKTGVQPDRI 1000
            SGYC+EA++VF  MK +GL PN+VTYNA+IDACGKGGV FK+  EIFD ML  GVQPDRI
Sbjct: 238  SGYCNEAIKVFDSMKSNGLMPNLVTYNAVIDACGKGGVEFKKVVEIFDGMLSNGVQPDRI 297

Query: 1001 TFNSLLAVCSGAGLWETARDLFHEMVYRGIDQDIYTYNTLLDTACNSSHIDAAFDIMSEM 1180
            TFNSLLAVCS  GLWE AR LF  MV +GIDQDI+TYNTLLD  C    +D AF+IMSEM
Sbjct: 298  TFNSLLAVCSRGGLWEAARRLFSAMVDKGIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEM 357

Query: 1181 PTKGIFPNEVTFSTMVRGCAKAGRFEKALSLFNEMKDIGIKLDRVAYNTLVAIYANLGRF 1360
            PTK I PN VT+STM+ G AK GR + AL++FNEMK +G+ LDRV+YNTL+++YA LGRF
Sbjct: 358  PTKNILPNVVTYSTMIDGYAKVGRLDDALNMFNEMKFLGVGLDRVSYNTLLSVYAKLGRF 417

Query: 1361 DEALSVFQEMETIGFKKDVVTYNALLDGFGKQGMYGKVKDLFQEMKAQNVSPNLLTYSTL 1540
            ++AL V +EME  G +KDVVTYNALL G+GKQ  Y +V+ +F+EMK   VSPNLLTYSTL
Sbjct: 418  EQALDVCKEMENAGIRKDVVTYNALLAGYGKQYRYDEVRRVFEEMKRGRVSPNLLTYSTL 477

Query: 1541 ISVYSKGGLCLEAMEVYKEFKNRGLKADVVFYSKLIDSLCKKGLLESSVMLLDKMMKEGI 1720
            I VYSKGGL  EAMEV++EFK  GLKADVV YS LID+LCK GL+ESSV LLD+M KEGI
Sbjct: 478  IDVYSKGGLYKEAMEVFREFKQAGLKADVVLYSALIDALCKNGLVESSVTLLDEMTKEGI 537

Query: 1721 NPNVVTYNSIINAFGQSTTADYSLHHEQWTGSSELTLASG-----SAEPSANNEEGDKIV 1885
             PNVVTYNSII+AFG+S +A   +     T + ++   S      + E  A ++E ++I+
Sbjct: 538  RPNVVTYNSIIDAFGRSASAQCVVDDSGETTALQVESLSSIVVQEAIESQAADKEDNRII 597

Query: 1886 RILAQLLPGKSGADKKGITSGQDLVCILQVLHKMHELGIKPNVVTFSAIINACSRCXXXX 2065
             I  +L   K+   K   +  Q+++CIL V  KMHEL IKPNVVTFSAI+NACSRC    
Sbjct: 598  EIFGKLAAEKACEAKN--SGKQEILCILGVFQKMHELKIKPNVVTFSAILNACSRCDSFE 655

Query: 2066 XXXXXXXXXRLFDNQVYGVAHGLLMGLHENVWFQALSLFDEMKGMDSSTASAFYNALTDV 2245
                     RLFDNQVYGVAHGLLMG  ENVW QA SLFDE+K MDSSTASAFYNALTD+
Sbjct: 656  DASMLLEELRLFDNQVYGVAHGLLMGYRENVWLQAQSLFDEVKLMDSSTASAFYNALTDM 715

Query: 2246 LWHFGQKHGAQLVVLEGQRRDVWPHAWSSSCLDLHLMSSGAARAMVHAWLLNIRSIVFEG 2425
            LWHFGQK GAQLVVLEG+RR VW + WS SCLDLHLMSSGAARAMVHAWLLNIRSIVFEG
Sbjct: 716  LWHFGQKRGAQLVVLEGKRRQVWENIWSDSCLDLHLMSSGAARAMVHAWLLNIRSIVFEG 775

Query: 2426 QELPKLLSILTGWGKHSKVVGEGALKRTVEALLISIGAPFQLAKSNIGRFTSPGAVVTAW 2605
             ELPKLLSILTGWGKHSKVVG+ AL+R VEALLI +GAPF+LAK N+GRF S G+VV AW
Sbjct: 776  HELPKLLSILTGWGKHSKVVGDSALRRAVEALLIGMGAPFRLAKCNLGRFISTGSVVAAW 835

Query: 2606 LRESCTLKVLVLQDERIHPKSVQTSKLPLLP 2698
            L+ES TL+VLVL D+R HP++     L  LP
Sbjct: 836  LKESGTLEVLVLHDDRTHPENKDLFSLSPLP 866


>ref|XP_004135985.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
            chloroplastic-like [Cucumis sativus]
          Length = 868

 Score =  997 bits (2578), Expect = 0.0
 Identities = 520/869 (59%), Positives = 634/869 (72%), Gaps = 12/869 (1%)
 Frame = +2

Query: 140  STPPPNYTLTTSKPYQNHHF--HHLKNNQTTTTKPNSRWSSQKV-----TLXXXXXXXXX 298
            ++ PP+ ++T +KPYQ H +  ++LKN++    + N  W++         L         
Sbjct: 2    ASTPPHCSITAAKPYQTHQYPQNNLKNHRQNA-RQNGPWTTTHKFPLVKPLPSTPGHSAT 60

Query: 299  XXXXXXXXXXXXXXXXXXXXXXXXXXXXDFSVRRSTRFVSKMHFGRPKFXXXXXXXXXXE 478
                                        +FS RRSTRFVSK HFGRPK           E
Sbjct: 61   KSTSTPLSQSPNFPSLCSLPTSKSELASNFSGRRSTRFVSKFHFGRPKSSMTTRHSAIAE 120

Query: 479  EVLEQALRFRGDDSGVENLLLNFGSRLCGSDDFTFLFRELGNRGELGLAMRCFEFAILRE 658
            EVL Q L+F  DD+ ++N+LLNF S+LCGS+D+TFL RELGNRGE   A+RCF+FA++RE
Sbjct: 121  EVLHQVLQFGKDDASLDNILLNFESKLCGSEDYTFLLRELGNRGECWKAIRCFDFALVRE 180

Query: 659  KRRSELGKLASSMISILGRLGKVELAEKIFKNAVNEGYGNTVYAYSALISAYAKSGYCDE 838
             R++E GKLAS+MIS LGRLGKVELA+ +F+ A++EGYGNTV+A+SALISAY KSGY DE
Sbjct: 181  GRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDE 240

Query: 839  ALRVFGVMKDSGLKPNIVTYNALIDACGKGGVGFKRASEIFDDMLKTGVQPDRITFNSLL 1018
            A++VF  MK SGLKPN+VTYNA+IDACGKGGV FKR  EIF++ML+ GVQPDRIT+NSLL
Sbjct: 241  AIKVFESMKVSGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLL 300

Query: 1019 AVCSGAGLWETARDLFHEMVYRGIDQDIYTYNTLLDTACNSSHIDAAFDIMSEMPTKGIF 1198
            AVCS  GLWE AR+LF+EM+ RGIDQD++TYNTLLD  C    +D A++IM EMP K I 
Sbjct: 301  AVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKIL 360

Query: 1199 PNEVTFSTMVRGCAKAGRFEKALSLFNEMKDIGIKLDRVAYNTLVAIYANLGRFDEALSV 1378
            PN VT+STM  G AKAGR E AL+L+NEMK +GI LDRV+YNTL++IYA LGRF++AL V
Sbjct: 361  PNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKV 420

Query: 1379 FQEMETIGFKKDVVTYNALLDGFGKQGMYGKVKDLFQEMKAQNVSPNLLTYSTLISVYSK 1558
             +EM + G KKDVVTYNALLDG+GKQG + +V  +F+EMK   V PNLLTYSTLI VYSK
Sbjct: 421  CKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSK 480

Query: 1559 GGLCLEAMEVYKEFKNRGLKADVVFYSKLIDSLCKKGLLESSVMLLDKMMKEGINPNVVT 1738
            G L  EAMEV++EFK  GLKADVV YS+LI++LCK GL++S+V+LLD+M KEGI PNVVT
Sbjct: 481  GSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVT 540

Query: 1739 YNSIINAFGQSTTADY-----SLHHEQWTGSSELTLASGSAEPSANNEEGDKIVRILAQL 1903
            YNSII+AFG+STTA++        +E+ + S    L  G  E   N ++G  + +   QL
Sbjct: 541  YNSIIDAFGRSTTAEFLVDGVGASNERQSESPSFMLIEGVDESEINWDDG-HVFKFYQQL 599

Query: 1904 LPGKSGADKKGITSGQDLVCILQVLHKMHELGIKPNVVTFSAIINACSRCXXXXXXXXXX 2083
            +  K G  KK     +++  IL V  KMHEL IKPNVVTFSAI+NACSRC          
Sbjct: 600  VSEKEGPAKKERLGKEEIRSILSVFKKMHELEIKPNVVTFSAILNACSRCKSIEDASMLL 659

Query: 2084 XXXRLFDNQVYGVAHGLLMGLHENVWFQALSLFDEMKGMDSSTASAFYNALTDVLWHFGQ 2263
               RLFDNQVYGVAHGLLMG  ENVW QA  LFDE+K MDSSTASAFYNALTD+LWHFGQ
Sbjct: 660  EELRLFDNQVYGVAHGLLMGFSENVWIQAQYLFDEVKQMDSSTASAFYNALTDMLWHFGQ 719

Query: 2264 KHGAQLVVLEGQRRDVWPHAWSSSCLDLHLMSSGAARAMVHAWLLNIRSIVFEGQELPKL 2443
            K GAQLVVLEG+RR VW   WS SCLDLHLMSSGAARAMVHAWLL I S+VFEG +LPKL
Sbjct: 720  KRGAQLVVLEGKRRKVWETLWSDSCLDLHLMSSGAARAMVHAWLLGIHSVVFEGHQLPKL 779

Query: 2444 LSILTGWGKHSKVVGEGALKRTVEALLISIGAPFQLAKSNIGRFTSPGAVVTAWLRESCT 2623
            LSILTGWGKHSKVVG+GAL+R +EALL S+GAPF++AK NIGR+ S G+VV AWL+ES T
Sbjct: 780  LSILTGWGKHSKVVGDGALRRAIEALLTSMGAPFRVAKCNIGRYVSTGSVVAAWLKESGT 839

Query: 2624 LKVLVLQDERIHPKSVQTSKLPLLPSTNL 2710
            LK+LVL D+R HP S     +  L + +L
Sbjct: 840  LKLLVLHDDRTHPDSENMDLISKLQTISL 868


>ref|XP_004166285.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
            chloroplastic-like [Cucumis sativus]
          Length = 868

 Score =  996 bits (2574), Expect = 0.0
 Identities = 519/869 (59%), Positives = 634/869 (72%), Gaps = 12/869 (1%)
 Frame = +2

Query: 140  STPPPNYTLTTSKPYQNHHF--HHLKNNQTTTTKPNSRWSSQKV-----TLXXXXXXXXX 298
            ++ PP+ ++T +KPYQ H +  ++LKN++    + N  W++         L         
Sbjct: 2    ASTPPHCSITAAKPYQTHQYPQNNLKNHRQNA-RQNGPWTTTHKFPLVKPLPSTPGHSAT 60

Query: 299  XXXXXXXXXXXXXXXXXXXXXXXXXXXXDFSVRRSTRFVSKMHFGRPKFXXXXXXXXXXE 478
                                        +FS RRSTRFVSK HFGRPK           E
Sbjct: 61   KSTSTPLSQSPNFPSLCSLPTSKSELASNFSGRRSTRFVSKFHFGRPKSSMTTRHSAIAE 120

Query: 479  EVLEQALRFRGDDSGVENLLLNFGSRLCGSDDFTFLFRELGNRGELGLAMRCFEFAILRE 658
            EVL Q L+F  DD+ ++N+LLNF S+LCGS+D+TFL RELGNRGE   A+RCF+FA++RE
Sbjct: 121  EVLHQVLQFGKDDASLDNILLNFESKLCGSEDYTFLLRELGNRGECWKAIRCFDFALVRE 180

Query: 659  KRRSELGKLASSMISILGRLGKVELAEKIFKNAVNEGYGNTVYAYSALISAYAKSGYCDE 838
             R++E GKLAS+MIS LGRLGKVELA+ +F+ A++EGYGNTV+A+SALISAY KSGY DE
Sbjct: 181  GRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDE 240

Query: 839  ALRVFGVMKDSGLKPNIVTYNALIDACGKGGVGFKRASEIFDDMLKTGVQPDRITFNSLL 1018
            A++VF  MK SGLKPN+VTYNA+IDACGKGGV FKR  EIF++ML+ GVQPDRIT+NSLL
Sbjct: 241  AIKVFESMKVSGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLL 300

Query: 1019 AVCSGAGLWETARDLFHEMVYRGIDQDIYTYNTLLDTACNSSHIDAAFDIMSEMPTKGIF 1198
            AVCS  GLWE AR+LF+EM+ RGIDQD++TYNTLLD  C    +D A++IM EMP K I 
Sbjct: 301  AVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKIL 360

Query: 1199 PNEVTFSTMVRGCAKAGRFEKALSLFNEMKDIGIKLDRVAYNTLVAIYANLGRFDEALSV 1378
            PN VT+STM  G AKAGR E AL+L+NEMK +GI LDRV+YNTL++IYA LGRF++AL V
Sbjct: 361  PNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKV 420

Query: 1379 FQEMETIGFKKDVVTYNALLDGFGKQGMYGKVKDLFQEMKAQNVSPNLLTYSTLISVYSK 1558
             +EM + G KKDVVTYNALLDG+GKQG + +V  +F+EMK   V PNLLTYSTLI VYSK
Sbjct: 421  CKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSK 480

Query: 1559 GGLCLEAMEVYKEFKNRGLKADVVFYSKLIDSLCKKGLLESSVMLLDKMMKEGINPNVVT 1738
            G L  EAMEV++EFK  GLKADVV YS+LI++LCK GL++S+V+LLD+M KEGI PNVVT
Sbjct: 481  GSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVT 540

Query: 1739 YNSIINAFGQSTTADY-----SLHHEQWTGSSELTLASGSAEPSANNEEGDKIVRILAQL 1903
            YNSII+AFG+STTA++        +E+ + S    L  G  E   N ++G  + +   QL
Sbjct: 541  YNSIIDAFGRSTTAEFLVDGVGASNERQSESPTFMLIEGVDESEINWDDG-HVFKFYQQL 599

Query: 1904 LPGKSGADKKGITSGQDLVCILQVLHKMHELGIKPNVVTFSAIINACSRCXXXXXXXXXX 2083
            +  K G  KK     +++  IL V  KMHEL IKPNVVTFSAI+NACSRC          
Sbjct: 600  VSEKEGPAKKERLGKEEIRSILSVFKKMHELEIKPNVVTFSAILNACSRCKSIEDASMLL 659

Query: 2084 XXXRLFDNQVYGVAHGLLMGLHENVWFQALSLFDEMKGMDSSTASAFYNALTDVLWHFGQ 2263
               RLFDNQVYGVAHGLLMG  ENVW QA  LFDE+K MDSSTASAFYNALTD+LWHFGQ
Sbjct: 660  EELRLFDNQVYGVAHGLLMGFSENVWIQAQYLFDEVKQMDSSTASAFYNALTDMLWHFGQ 719

Query: 2264 KHGAQLVVLEGQRRDVWPHAWSSSCLDLHLMSSGAARAMVHAWLLNIRSIVFEGQELPKL 2443
            K GAQLVVLEG+RR VW   WS SCLDLHLMSSGAARAMVHAWLL I S+VFEG +LPKL
Sbjct: 720  KRGAQLVVLEGKRRKVWETLWSDSCLDLHLMSSGAARAMVHAWLLGIHSVVFEGHQLPKL 779

Query: 2444 LSILTGWGKHSKVVGEGALKRTVEALLISIGAPFQLAKSNIGRFTSPGAVVTAWLRESCT 2623
            LSILTGWGKHSKVVG+GAL+R +EALL S+GAPF++AK NIGR+ S G+VV AWL+ES T
Sbjct: 780  LSILTGWGKHSKVVGDGALRRAIEALLTSMGAPFRVAKCNIGRYVSTGSVVAAWLKESGT 839

Query: 2624 LKVLVLQDERIHPKSVQTSKLPLLPSTNL 2710
            LK+LVL D+R HP +     +  L + +L
Sbjct: 840  LKLLVLHDDRTHPDTENMDLISKLQTISL 868


>ref|NP_180698.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
            gi|75206083|sp|Q9SIC9.1|PP178_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At2g31400, chloroplastic; Flags: Precursor
            gi|4589961|gb|AAD26479.1| unknown protein [Arabidopsis
            thaliana] gi|330253448|gb|AEC08542.1| genomes uncoupled 1
            protein [Arabidopsis thaliana]
          Length = 918

 Score =  925 bits (2390), Expect = 0.0
 Identities = 464/756 (61%), Positives = 576/756 (76%), Gaps = 1/756 (0%)
 Frame = +2

Query: 383  DFSVRRSTRFVSKMHFGRPKFXXXXXXXXXXEEVLEQALRFRGDDSGVENLLLNFGSRLC 562
            DFS RRSTRFVSKMHFGR K           E+ L+ A+ F GDD    +L+L+F S+LC
Sbjct: 135  DFSGRRSTRFVSKMHFGRQKTTMATRHSSAAEDALQNAIDFSGDDEMFHSLMLSFESKLC 194

Query: 563  GSDDFTFLFRELGNRGELGLAMRCFEFAILREKRRSELGKLASSMISILGRLGKVELAEK 742
            GSDD T++ RELGNR E   A+  +EFA+ RE+R++E GKLAS+MIS LGR GKV +A++
Sbjct: 195  GSDDCTYIIRELGNRNECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKR 254

Query: 743  IFKNAVNEGYGNTVYAYSALISAYAKSGYCDEALRVFGVMKDSGLKPNIVTYNALIDACG 922
            IF+ A   GYGNTVYA+SALISAY +SG  +EA+ VF  MK+ GL+PN+VTYNA+IDACG
Sbjct: 255  IFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACG 314

Query: 923  KGGVGFKRASEIFDDMLKTGVQPDRITFNSLLAVCSGAGLWETARDLFHEMVYRGIDQDI 1102
            KGG+ FK+ ++ FD+M + GVQPDRITFNSLLAVCS  GLWE AR+LF EM  R I+QD+
Sbjct: 315  KGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDV 374

Query: 1103 YTYNTLLDTACNSSHIDAAFDIMSEMPTKGIFPNEVTFSTMVRGCAKAGRFEKALSLFNE 1282
            ++YNTLLD  C    +D AF+I+++MP K I PN V++ST++ G AKAGRF++AL+LF E
Sbjct: 375  FSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGE 434

Query: 1283 MKDIGIKLDRVAYNTLVAIYANLGRFDEALSVFQEMETIGFKKDVVTYNALLDGFGKQGM 1462
            M+ +GI LDRV+YNTL++IY  +GR +EAL + +EM ++G KKDVVTYNALL G+GKQG 
Sbjct: 435  MRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGK 494

Query: 1463 YGKVKDLFQEMKAQNVSPNLLTYSTLISVYSKGGLCLEAMEVYKEFKNRGLKADVVFYSK 1642
            Y +VK +F EMK ++V PNLLTYSTLI  YSKGGL  EAME+++EFK+ GL+ADVV YS 
Sbjct: 495  YDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSA 554

Query: 1643 LIDSLCKKGLLESSVMLLDKMMKEGINPNVVTYNSIINAFGQSTTADYSLHHEQWTGSSE 1822
            LID+LCK GL+ S+V L+D+M KEGI+PNVVTYNSII+AFG+S T D S     ++    
Sbjct: 555  LIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRS---ADYSNGGS 611

Query: 1823 LTLASGSAEPSANNEEGDKIVRILAQLLPGKSGADKKGITSG-QDLVCILQVLHKMHELG 1999
            L  +S SA  +    EG++++++  QL    +    K    G Q+L CIL+V  KMH+L 
Sbjct: 612  LPFSS-SALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLE 670

Query: 2000 IKPNVVTFSAIINACSRCXXXXXXXXXXXXXRLFDNQVYGVAHGLLMGLHENVWFQALSL 2179
            IKPNVVTFSAI+NACSRC             RLFDN+VYGV HGLLMG  ENVW QA SL
Sbjct: 671  IKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNKVYGVVHGLLMGQRENVWLQAQSL 730

Query: 2180 FDEMKGMDSSTASAFYNALTDVLWHFGQKHGAQLVVLEGQRRDVWPHAWSSSCLDLHLMS 2359
            FD++  MD STASAFYNALTD+LWHFGQK GA+LV LEG+ R VW + WS SCLDLHLMS
Sbjct: 731  FDKVNEMDGSTASAFYNALTDMLWHFGQKRGAELVALEGRSRQVWENVWSDSCLDLHLMS 790

Query: 2360 SGAARAMVHAWLLNIRSIVFEGQELPKLLSILTGWGKHSKVVGEGALKRTVEALLISIGA 2539
            SGAARAMVHAWLLNIRSIV+EG ELPK+LSILTGWGKHSKVVG+GAL+R VE LL  + A
Sbjct: 791  SGAARAMVHAWLLNIRSIVYEGHELPKVLSILTGWGKHSKVVGDGALRRAVEVLLRGMDA 850

Query: 2540 PFQLAKSNIGRFTSPGAVVTAWLRESCTLKVLVLQD 2647
            PF L+K N+GRFTS G+VV  WLRES TLK+L+L D
Sbjct: 851  PFHLSKCNMGRFTSSGSVVATWLRESATLKLLILHD 886