BLASTX nr result

ID: Lithospermum22_contig00002528 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00002528
         (745 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285149.1| PREDICTED: 30S ribosomal protein S20, chloro...   151   2e-34
ref|XP_002329074.1| predicted protein [Populus trichocarpa] gi|2...   149   8e-34
ref|XP_002532240.1| 30S ribosomal protein S20, putative [Ricinus...   147   2e-33
ref|NP_001237852.1| uncharacterized protein LOC100499656 [Glycin...   142   6e-32
ref|XP_004146049.1| PREDICTED: 30S ribosomal protein S20, chloro...   142   7e-32

>ref|XP_002285149.1| PREDICTED: 30S ribosomal protein S20, chloroplastic [Vitis
           vinifera] gi|302142967|emb|CBI20262.3| unnamed protein
           product [Vitis vinifera]
          Length = 183

 Score =  151 bits (381), Expect = 2e-34
 Identities = 88/172 (51%), Positives = 105/172 (61%), Gaps = 4/172 (2%)
 Frame = -2

Query: 642 HCISTTWNFTPNLTSLSLNPKLNTSPIFKPLSFSSNL----FSQGXXXXXXXXXXXXXXX 475
           HC++    F   + SL+ +   + S  F  L FSSNL    FS+G               
Sbjct: 10  HCLALPSKF--RILSLNASSSSSCSVPFTSLGFSSNLSQTVFSKGRLSISTIRGPTHHSI 67

Query: 474 VCEAAPTKKADSXXXXXXXXXXXRIYNKSKKSEVKTRMKKVLEALEVLRKKPDAQPEEVI 295
           VC+AAP +KADS           RIYNK++KSE++TRMKKVLE L+ L+KKPDAQ EEV+
Sbjct: 68  VCDAAPMRKADSAAKRVRQAEKRRIYNKARKSEIRTRMKKVLEELDGLKKKPDAQAEEVL 127

Query: 294 PVEKLIAEAYSAIDKAVKVRTLHRNTGXXXXXXXXXXXXAVEIHHGWYTPDP 139
           P+EKLIAEAYS IDKAVKV TLHRNTG            AVEIHHGWYTP P
Sbjct: 128 PIEKLIAEAYSVIDKAVKVGTLHRNTGARRKSRLARRKKAVEIHHGWYTPAP 179


>ref|XP_002329074.1| predicted protein [Populus trichocarpa] gi|222869743|gb|EEF06874.1|
           predicted protein [Populus trichocarpa]
          Length = 182

 Score =  149 bits (375), Expect = 8e-34
 Identities = 87/177 (49%), Positives = 107/177 (60%), Gaps = 5/177 (2%)
 Frame = -2

Query: 636 ISTTWNFTPNLTSLSLNPKLNTSPIFKPLSFSSNL----FSQGXXXXXXXXXXXXXXXV- 472
           +S      P L +LSLN    ++  F  LSFSS+L    F++G               + 
Sbjct: 6   LSPCLGLPPKLKNLSLNSTTCSTSTFSSLSFSSSLSHSIFNKGCLSMRTTQRSIHNFSIV 65

Query: 471 CEAAPTKKADSXXXXXXXXXXXRIYNKSKKSEVKTRMKKVLEALEVLRKKPDAQPEEVIP 292
           CE+ P KKADS           R+YNK++KSEVKTRMKKVLEAL+ L+KKP+AQ EEV+P
Sbjct: 66  CESTPKKKADSAEKRTRQAEKRRVYNKARKSEVKTRMKKVLEALDDLKKKPEAQFEEVLP 125

Query: 291 VEKLIAEAYSAIDKAVKVRTLHRNTGXXXXXXXXXXXXAVEIHHGWYTPDPTPANTA 121
           +EKLIAEAYS IDKA+KV TLHRNTG            AVEIHHGWY+P P  A  +
Sbjct: 126 IEKLIAEAYSVIDKAIKVGTLHRNTGARRKSRLARRKKAVEIHHGWYSPAPAAATAS 182


>ref|XP_002532240.1| 30S ribosomal protein S20, putative [Ricinus communis]
           gi|223528058|gb|EEF30134.1| 30S ribosomal protein S20,
           putative [Ricinus communis]
          Length = 185

 Score =  147 bits (372), Expect = 2e-33
 Identities = 90/176 (51%), Positives = 107/176 (60%), Gaps = 7/176 (3%)
 Frame = -2

Query: 636 ISTTWNFTPNLTSLSLNPKLN---TSPIFKPLSFSS----NLFSQGXXXXXXXXXXXXXX 478
           +S+ ++    L SLSL    +   T P  + LSFSS    ++F++G              
Sbjct: 7   LSSCFSVPTKLKSLSLTTTSSSTITYPALRSLSFSSAISHDVFNKGCLSMSIVKRPIGHS 66

Query: 477 XVCEAAPTKKADSXXXXXXXXXXXRIYNKSKKSEVKTRMKKVLEALEVLRKKPDAQPEEV 298
            VCEAAP K+ADS           RIY+K+ KSEV+TRMKKVLEAL+ LRKK DAQ EEV
Sbjct: 67  IVCEAAPKKRADSAAKRARQAEKRRIYHKAHKSEVRTRMKKVLEALDDLRKKSDAQAEEV 126

Query: 297 IPVEKLIAEAYSAIDKAVKVRTLHRNTGXXXXXXXXXXXXAVEIHHGWYTPDPTPA 130
           +P+EKLIAEAYS IDKAVKV TLHRNTG            AVEIHHGWYTP P  A
Sbjct: 127 LPIEKLIAEAYSVIDKAVKVGTLHRNTGARRKSRLARRKKAVEIHHGWYTPAPAEA 182


>ref|NP_001237852.1| uncharacterized protein LOC100499656 [Glycine max]
           gi|255625577|gb|ACU13133.1| unknown [Glycine max]
          Length = 180

 Score =  142 bits (359), Expect = 6e-32
 Identities = 90/180 (50%), Positives = 107/180 (59%), Gaps = 7/180 (3%)
 Frame = -2

Query: 657 MAATIHCISTTWNFTPN-LTSLSLNPKLNTSPIFKP--LSFSSNL----FSQGXXXXXXX 499
           MAA++ C   +W   P+ + SLSL    ++  I     LSFS NL    FS+G       
Sbjct: 1   MAASVSC---SWLTLPSQMRSLSLTSSSSSLCISNSASLSFSRNLSRPFFSKGNSLSLST 57

Query: 498 XXXXXXXXVCEAAPTKKADSXXXXXXXXXXXRIYNKSKKSEVKTRMKKVLEALEVLRKKP 319
                    CEAAP KK DS           R+YNK++KSE+KTR KKVLEALEVL+KK 
Sbjct: 58  VLRRASVV-CEAAPKKKVDSAVKRARQAEKHRVYNKARKSEIKTRTKKVLEALEVLKKKS 116

Query: 318 DAQPEEVIPVEKLIAEAYSAIDKAVKVRTLHRNTGXXXXXXXXXXXXAVEIHHGWYTPDP 139
           DAQ EE++P+EKLI EAYS IDKAV+V TLHRNTG            AVEIHHGWYTP P
Sbjct: 117 DAQAEEILPIEKLIGEAYSIIDKAVRVGTLHRNTGANRKSRLARRKKAVEIHHGWYTPAP 176


>ref|XP_004146049.1| PREDICTED: 30S ribosomal protein S20, chloroplastic-like [Cucumis
           sativus] gi|449507080|ref|XP_004162928.1| PREDICTED: 30S
           ribosomal protein S20, chloroplastic-like [Cucumis
           sativus]
          Length = 184

 Score =  142 bits (358), Expect = 7e-32
 Identities = 90/185 (48%), Positives = 104/185 (56%), Gaps = 10/185 (5%)
 Frame = -2

Query: 654 AATIHCISTTWNFTPNLTSLSLN------PKLNTSPIFKPLSFSSNL----FSQGXXXXX 505
           AA I C S +  F     +LSLN      P   +S   + LSFSSN+    FS G     
Sbjct: 3   AAAITCFSLSSKFG----NLSLNGFSSSIPAAPSSSTLRSLSFSSNISLSAFSNGCLSMR 58

Query: 504 XXXXXXXXXXVCEAAPTKKADSXXXXXXXXXXXRIYNKSKKSEVKTRMKKVLEALEVLRK 325
                     VCEAAP  K DS           RIYNK++KSE+KTRMKKVLEAL+ L+K
Sbjct: 59  KTERLHRYSVVCEAAPKSKVDSAAKRARQAEKRRIYNKARKSEIKTRMKKVLEALDGLKK 118

Query: 324 KPDAQPEEVIPVEKLIAEAYSAIDKAVKVRTLHRNTGXXXXXXXXXXXXAVEIHHGWYTP 145
           K +AQ EEV+P+E LIAEAYS IDKAV+  TLHRNT             AVEIHHGWYTP
Sbjct: 119 KAEAQSEEVLPIETLIAEAYSVIDKAVRAGTLHRNTAARRKSRLARRKKAVEIHHGWYTP 178

Query: 144 DPTPA 130
           D   A
Sbjct: 179 DSPAA 183


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