BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00002504
         (1906 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265397.2| PREDICTED: pentatricopeptide repeat-containi...   609   e-172
emb|CBI15328.3| unnamed protein product [Vitis vinifera]              609   e-172
ref|XP_002302931.1| predicted protein [Populus trichocarpa] gi|2...   609   e-172
ref|XP_002514631.1| pentatricopeptide repeat-containing protein,...   583   e-164
ref|XP_003556470.1| PREDICTED: pentatricopeptide repeat-containi...   579   e-163

>ref|XP_002265397.2| PREDICTED: pentatricopeptide repeat-containing protein At5g60960,
            mitochondrial-like [Vitis vinifera]
          Length = 516

 Score =  609 bits (1570), Expect = e-172
 Identities = 301/447 (67%), Positives = 358/447 (80%)
 Frame = -1

Query: 1591 ELVEALSVELLKDPDVESLDVVKRLELSFSHVSLTPEILLKTLNLSNDAGRGVLGFLNWV 1412
            ++ ++LS ELLKDPD E + +++RL+LSFSH++ +P ++L+TLN S DAGR VLGF  W+
Sbjct: 72   QIAQSLSSELLKDPDSEPVPIIQRLQLSFSHITPSPPLILQTLNTSPDAGRTVLGFYKWL 131

Query: 1411 KKRSDFEVTDEVLGFFVDYFGRRKDFKATHDLLVEXXXXXXXKCFECAVDRLVRAGRPTQ 1232
                 F  +DE + FFVDYFGRRKDFKA H++L++       K  E A+DRLVRAGR TQ
Sbjct: 132  SSNPKFVHSDETISFFVDYFGRRKDFKAIHEVLMDGRNFAGAKTLESAIDRLVRAGRATQ 191

Query: 1231 TVSFFERMESDYGFXXXXXXXXXXXSRLCDHGFASYAEKMVKNLANEFFPDEYICDMLIK 1052
             VSFF+RME DYGF           S+LC+HGFAS+AEK+VKN+ANE FP+E ICD+LIK
Sbjct: 192  VVSFFDRMEVDYGFRRDRESLTMVVSKLCEHGFASHAEKVVKNVANEIFPNETICDLLIK 251

Query: 1051 GWCVDDKFDEAVRFSAEMYRGGFELSTFACNEMLDCVCRLSRKKDPFRLKSEAEKVLYGM 872
            GWCVD K DEA R + EM+RGGFE+ T A N +LDC+C+L RKKDPFRL+SEAEK+L  M
Sbjct: 252  GWCVDGKLDEARRLAEEMFRGGFEIGTMAYNSILDCICKLCRKKDPFRLESEAEKILVDM 311

Query: 871  EEKGIPRDVETFNVLICNLCKIRKTEDAVKLFHRMGEWGCHPNETTFILLVRSLYQAARV 692
            +  G+PR+VETFNVLI NLCKIRKTEDA+KLF+RMGEWGC+PNETTF++L RSLYQAARV
Sbjct: 312  DVAGVPRNVETFNVLITNLCKIRKTEDAMKLFYRMGEWGCYPNETTFLVLTRSLYQAARV 371

Query: 691  GEGDEMIDRMKSAGYGFALDKKEYYGLLKILCGIERIDHAMSVFAMMKADGCEPGIKTYD 512
            GEGDEMIDRMKSAG+G ALDKK YY  +KILCGIERIDHAMS+F+ MK DGC+PGIKTYD
Sbjct: 372  GEGDEMIDRMKSAGFGNALDKKAYYEFIKILCGIERIDHAMSLFSKMKEDGCKPGIKTYD 431

Query: 511  LLMGKLVAHGRVDKANDLFKEAANAGLPVEPKAYKLDPRFAXXXXXXXXXXXKRETLPEK 332
            LLMGKL AHGR+DKAN LF EA N G+PVE KAYKLDPRF            KRETLPEK
Sbjct: 432  LLMGKLCAHGRLDKANALFSEAVNRGVPVESKAYKLDPRFV-KKPTVAKKEKKRETLPEK 490

Query: 331  MARKRRRLKQIRLSFVKKPKRMTRRAY 251
            MARKRRRL++IRLSFVKKPKRM RRA+
Sbjct: 491  MARKRRRLRKIRLSFVKKPKRM-RRAF 516


>emb|CBI15328.3| unnamed protein product [Vitis vinifera]
          Length = 532

 Score =  609 bits (1570), Expect = e-172
 Identities = 301/447 (67%), Positives = 358/447 (80%)
 Frame = -1

Query: 1591 ELVEALSVELLKDPDVESLDVVKRLELSFSHVSLTPEILLKTLNLSNDAGRGVLGFLNWV 1412
            ++ ++LS ELLKDPD E + +++RL+LSFSH++ +P ++L+TLN S DAGR VLGF  W+
Sbjct: 88   QIAQSLSSELLKDPDSEPVPIIQRLQLSFSHITPSPPLILQTLNTSPDAGRTVLGFYKWL 147

Query: 1411 KKRSDFEVTDEVLGFFVDYFGRRKDFKATHDLLVEXXXXXXXKCFECAVDRLVRAGRPTQ 1232
                 F  +DE + FFVDYFGRRKDFKA H++L++       K  E A+DRLVRAGR TQ
Sbjct: 148  SSNPKFVHSDETISFFVDYFGRRKDFKAIHEVLMDGRNFAGAKTLESAIDRLVRAGRATQ 207

Query: 1231 TVSFFERMESDYGFXXXXXXXXXXXSRLCDHGFASYAEKMVKNLANEFFPDEYICDMLIK 1052
             VSFF+RME DYGF           S+LC+HGFAS+AEK+VKN+ANE FP+E ICD+LIK
Sbjct: 208  VVSFFDRMEVDYGFRRDRESLTMVVSKLCEHGFASHAEKVVKNVANEIFPNETICDLLIK 267

Query: 1051 GWCVDDKFDEAVRFSAEMYRGGFELSTFACNEMLDCVCRLSRKKDPFRLKSEAEKVLYGM 872
            GWCVD K DEA R + EM+RGGFE+ T A N +LDC+C+L RKKDPFRL+SEAEK+L  M
Sbjct: 268  GWCVDGKLDEARRLAEEMFRGGFEIGTMAYNSILDCICKLCRKKDPFRLESEAEKILVDM 327

Query: 871  EEKGIPRDVETFNVLICNLCKIRKTEDAVKLFHRMGEWGCHPNETTFILLVRSLYQAARV 692
            +  G+PR+VETFNVLI NLCKIRKTEDA+KLF+RMGEWGC+PNETTF++L RSLYQAARV
Sbjct: 328  DVAGVPRNVETFNVLITNLCKIRKTEDAMKLFYRMGEWGCYPNETTFLVLTRSLYQAARV 387

Query: 691  GEGDEMIDRMKSAGYGFALDKKEYYGLLKILCGIERIDHAMSVFAMMKADGCEPGIKTYD 512
            GEGDEMIDRMKSAG+G ALDKK YY  +KILCGIERIDHAMS+F+ MK DGC+PGIKTYD
Sbjct: 388  GEGDEMIDRMKSAGFGNALDKKAYYEFIKILCGIERIDHAMSLFSKMKEDGCKPGIKTYD 447

Query: 511  LLMGKLVAHGRVDKANDLFKEAANAGLPVEPKAYKLDPRFAXXXXXXXXXXXKRETLPEK 332
            LLMGKL AHGR+DKAN LF EA N G+PVE KAYKLDPRF            KRETLPEK
Sbjct: 448  LLMGKLCAHGRLDKANALFSEAVNRGVPVESKAYKLDPRFV-KKPTVAKKEKKRETLPEK 506

Query: 331  MARKRRRLKQIRLSFVKKPKRMTRRAY 251
            MARKRRRL++IRLSFVKKPKRM RRA+
Sbjct: 507  MARKRRRLRKIRLSFVKKPKRM-RRAF 532


>ref|XP_002302931.1| predicted protein [Populus trichocarpa] gi|222844657|gb|EEE82204.1|
            predicted protein [Populus trichocarpa]
          Length = 516

 Score =  609 bits (1570), Expect = e-172
 Identities = 319/540 (59%), Positives = 386/540 (71%), Gaps = 8/540 (1%)
 Frame = -1

Query: 1849 STFHLRSLLRRLYITTXXXXXXXXPYLHHFFNSSTTKNPLHTSPFFLSKT----FCTTQK 1682
            ++FHLR LLR                 +H  +       LH++P  L KT    FC +Q+
Sbjct: 5    TSFHLRHLLRH----------------YHLSSPPPITFSLHSTPTHLPKTPAFPFCLSQR 48

Query: 1681 NQEQDQELPETSSTELAKDPIVINQQNQDQELVEALSVELLKDPDVESLDVVKRLELSFS 1502
                    P +SS  L  + I    ++ D  +V++LS E+ +DP+ + L + +RL LSFS
Sbjct: 49   --------PFSSSQTLNPNAI----ESPDPAIVQSLSTEISRDPNTDPLSISERLHLSFS 96

Query: 1501 HVS----LTPEILLKTLNLSNDAGRGVLGFLNWVKKRSDFEVTDEVLGFFVDYFGRRKDF 1334
            H++    LTP ++L+TL LS DAGR V+GF NW+ K ++FE  DE L  FVDYFGRRKDF
Sbjct: 97   HLTKNNALTPSLVLQTLKLSPDAGRTVIGFHNWLIKDANFEQNDESLALFVDYFGRRKDF 156

Query: 1333 KATHDLLVEXXXXXXXKCFECAVDRLVRAGRPTQTVSFFERMESDYGFXXXXXXXXXXXS 1154
            KA HDLLVE       KCFE  +DRLVRAGR TQ + FFERME DYGF            
Sbjct: 157  KAAHDLLVEGKSVAGVKCFESMIDRLVRAGRTTQVIGFFERMERDYGFKRDKESLTFVVQ 216

Query: 1153 RLCDHGFASYAEKMVKNLANEFFPDEYICDMLIKGWCVDDKFDEAVRFSAEMYRGGFELS 974
            +LC++G+ASYAEKMVKNLANE FPD+ ICD+LIKGWCVD K +EA R + EMYRGGFE+ 
Sbjct: 217  KLCENGYASYAEKMVKNLANEIFPDDGICDLLIKGWCVDGKLEEAKRLAGEMYRGGFEIG 276

Query: 973  TFACNEMLDCVCRLSRKKDPFRLKSEAEKVLYGMEEKGIPRDVETFNVLICNLCKIRKTE 794
            T A N MLDCVC+L R+KDPFRL+SE EKVL  M+ +G+PR+VETFNVLI NLCK+R+TE
Sbjct: 277  TMAFNAMLDCVCKLCREKDPFRLESEVEKVLMEMDIRGVPRNVETFNVLISNLCKVRRTE 336

Query: 793  DAVKLFHRMGEWGCHPNETTFILLVRSLYQAARVGEGDEMIDRMKSAGYGFALDKKEYYG 614
            DA+KLF R+GEWGC P+ETTF++L+RSLYQAARVGEGDEMIDRMKSAGYG  LDKK YYG
Sbjct: 337  DAMKLFSRIGEWGCCPDETTFLVLIRSLYQAARVGEGDEMIDRMKSAGYGDKLDKKAYYG 396

Query: 613  LLKILCGIERIDHAMSVFAMMKADGCEPGIKTYDLLMGKLVAHGRVDKANDLFKEAANAG 434
             LKILCGIER++HAMSVF MMKADGC+PGIKTYDLLMGK   H R+DKAN L+ EA + G
Sbjct: 397  FLKILCGIERLEHAMSVFEMMKADGCKPGIKTYDLLMGKWCTHNRLDKANVLYNEALSNG 456

Query: 433  LPVEPKAYKLDPRFAXXXXXXXXXXXKRETLPEKMARKRRRLKQIRLSFVKKPKRMTRRA 254
            + V PK Y++DP+F            KRETLPEKMARKRRRLKQIRLSFVKKPK+  RRA
Sbjct: 457  VTVTPKEYRVDPKF-MKKPKAVKKEKKRETLPEKMARKRRRLKQIRLSFVKKPKKGMRRA 515


>ref|XP_002514631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223546235|gb|EEF47737.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 569

 Score =  583 bits (1502), Expect = e-164
 Identities = 294/492 (59%), Positives = 362/492 (73%), Gaps = 2/492 (0%)
 Frame = -1

Query: 1720 PFFLSKTFCTTQKNQEQDQELPETSSTELAKDPIVINQQNQDQELVEALSVELLKDPDVE 1541
            P  LSK F T   N   +          + +DP           + +++S EL+K+P+ +
Sbjct: 98   PLSLSKPFSTQTLNPNNN----------VLEDP---------NPIAQSISAELIKNPNSD 138

Query: 1540 SLDVVKRLELSFSHV--SLTPEILLKTLNLSNDAGRGVLGFLNWVKKRSDFEVTDEVLGF 1367
            SL +++RL L FSH+  S+TP I+L+TLNLS DAGR VLGF  W+ K ++F+ TDE + F
Sbjct: 139  SLSILQRLNLHFSHINNSITPSIILQTLNLSPDAGRTVLGFHQWLVKVANFKNTDETISF 198

Query: 1366 FVDYFGRRKDFKATHDLLVEXXXXXXXKCFECAVDRLVRAGRPTQTVSFFERMESDYGFX 1187
            F+DYFGRRKDF++TH+LL +       KCFE  V+RLVRAGR T+ + FF+RME DYGF 
Sbjct: 199  FIDYFGRRKDFQSTHELLCDSKDVIGYKCFESMVNRLVRAGRATKVMGFFDRMERDYGFK 258

Query: 1186 XXXXXXXXXXSRLCDHGFASYAEKMVKNLANEFFPDEYICDMLIKGWCVDDKFDEAVRFS 1007
                        LCD+G+ASYAEKMVKNLANE FPDE ICD+LIKGWCVD K DEA R +
Sbjct: 259  RDRENLRLVVKMLCDNGYASYAEKMVKNLANEIFPDENICDLLIKGWCVDGKLDEAKRLA 318

Query: 1006 AEMYRGGFELSTFACNEMLDCVCRLSRKKDPFRLKSEAEKVLYGMEEKGIPRDVETFNVL 827
             EMYRGGFE+ T A N +LDCVC+L R+KDPF+++SE EKVL  M+ +G+PR+VETFNVL
Sbjct: 319  GEMYRGGFEIGTVAYNAILDCVCKLCREKDPFKIESEVEKVLVEMDTRGVPRNVETFNVL 378

Query: 826  ICNLCKIRKTEDAVKLFHRMGEWGCHPNETTFILLVRSLYQAARVGEGDEMIDRMKSAGY 647
            I NLCK+RKT+DA+ LF+RM EWGC P++TTF++L+RSLYQAARVGEGDEMIDRMKS+GY
Sbjct: 379  ITNLCKMRKTQDALNLFNRMREWGCDPDDTTFLVLIRSLYQAARVGEGDEMIDRMKSSGY 438

Query: 646  GFALDKKEYYGLLKILCGIERIDHAMSVFAMMKADGCEPGIKTYDLLMGKLVAHGRVDKA 467
            G  LDKK YYG LKILCGIER++HA+SVF MMKADGC+PGIKTYDLL+GK     RVDK 
Sbjct: 439  GNKLDKKAYYGFLKILCGIERLEHAVSVFEMMKADGCKPGIKTYDLLIGKWCTRNRVDKG 498

Query: 466  NDLFKEAANAGLPVEPKAYKLDPRFAXXXXXXXXXXXKRETLPEKMARKRRRLKQIRLSF 287
            N LF EA   G+PV PK YK+D ++            KRETLPEKMARKRRRLKQIRLSF
Sbjct: 499  NALFNEALRNGVPVAPKEYKVDEKY-MKKPKAVKKEKKRETLPEKMARKRRRLKQIRLSF 557

Query: 286  VKKPKRMTRRAY 251
            VKKPK+M RR +
Sbjct: 558  VKKPKKMMRRPF 569


>ref|XP_003556470.1| PREDICTED: pentatricopeptide repeat-containing protein At5g60960,
            mitochondrial-like isoform 1 [Glycine max]
            gi|356576706|ref|XP_003556471.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g60960,
            mitochondrial-like isoform 2 [Glycine max]
          Length = 509

 Score =  579 bits (1493), Expect = e-163
 Identities = 300/499 (60%), Positives = 356/499 (71%)
 Frame = -1

Query: 1753 SSTTKNPLHTSPFFLSKTFCTTQKNQEQDQELPETSSTELAKDPIVINQQNQDQELVEAL 1574
            S T+  P+H  P F  +       +    + L   SS  + +     + + Q  ++  +L
Sbjct: 20   SFTSPTPIHPPPLFPQQP-----SSHFHSRTLLTPSSLFIIRH---FSSETQTDQIAHSL 71

Query: 1573 SVELLKDPDVESLDVVKRLELSFSHVSLTPEILLKTLNLSNDAGRGVLGFLNWVKKRSDF 1394
            S ELLK+PD ++L V +RL LSFSH++ TP ++L+TLNLS+++GR VLGF  W+     F
Sbjct: 72   SSELLKEPDSDALSVSQRLHLSFSHITPTPNLILQTLNLSHESGRTVLGFHQWLSSNPQF 131

Query: 1393 EVTDEVLGFFVDYFGRRKDFKATHDLLVEXXXXXXXKCFECAVDRLVRAGRPTQTVSFFE 1214
              TD+ L +FVDYFGRRKDFKATHD+L         K    A+DRLVRAGRP+Q V FFE
Sbjct: 132  SHTDDTLSYFVDYFGRRKDFKATHDVLSAASPAAGPKTLASAIDRLVRAGRPSQAVQFFE 191

Query: 1213 RMESDYGFXXXXXXXXXXXSRLCDHGFASYAEKMVKNLANEFFPDEYICDMLIKGWCVDD 1034
            RME DYG             +LC  GFASYAEKMVK+LA  FFPDE  CDMLIKGWCVD 
Sbjct: 192  RMERDYGLKRDRASLKVVVEKLCSKGFASYAEKMVKDLAKVFFPDEATCDMLIKGWCVDG 251

Query: 1033 KFDEAVRFSAEMYRGGFELSTFACNEMLDCVCRLSRKKDPFRLKSEAEKVLYGMEEKGIP 854
            K DEA R + EMYRGGFEL   + N MLDCVC+L R+KDPF+L SEAEKVL  ME +G+P
Sbjct: 252  KLDEAQRLAGEMYRGGFELGVGSYNAMLDCVCKLCRQKDPFQLHSEAEKVLVEMEHRGVP 311

Query: 853  RDVETFNVLICNLCKIRKTEDAVKLFHRMGEWGCHPNETTFILLVRSLYQAARVGEGDEM 674
            R+VETFNVLI NLCKIRKTEDA+ LF  MGEWGC+PNETTF++L+RSLYQAAR+ EGDEM
Sbjct: 312  RNVETFNVLITNLCKIRKTEDALGLFRSMGEWGCYPNETTFLVLIRSLYQAARLEEGDEM 371

Query: 673  IDRMKSAGYGFALDKKEYYGLLKILCGIERIDHAMSVFAMMKADGCEPGIKTYDLLMGKL 494
            IDRM+SAG+G  LDKK YY LLKILCGIER+DHA+SVFAMMK  GCEPG+ TYDLLMGKL
Sbjct: 372  IDRMRSAGFGEFLDKKAYYQLLKILCGIERVDHALSVFAMMKDGGCEPGLITYDLLMGKL 431

Query: 493  VAHGRVDKANDLFKEAANAGLPVEPKAYKLDPRFAXXXXXXXXXXXKRETLPEKMARKRR 314
             AH R+DKAN LF EA + GLPV  K Y +DPR+            KRETLPEKMARKR 
Sbjct: 432  GAHNRIDKANALFNEAKSRGLPVMLKEYAVDPRY-LKKKKVVKGVKKRETLPEKMARKRS 490

Query: 313  RLKQIRLSFVKKPKRMTRR 257
            RLKQIRLSFVKKPKR+  R
Sbjct: 491  RLKQIRLSFVKKPKRVMGR 509