BLASTX nr result

ID: Lithospermum22_contig00002484 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00002484
         (1916 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512627.1| nucleic acid binding protein, putative [Rici...   512   e-142
ref|XP_002278934.2| PREDICTED: zinc finger CCCH domain-containin...   511   e-142
ref|XP_002328972.1| predicted protein [Populus trichocarpa] gi|2...   508   e-141
ref|XP_003534517.1| PREDICTED: zinc finger CCCH domain-containin...   505   e-140
ref|XP_002325901.1| predicted protein [Populus trichocarpa] gi|2...   501   e-139

>ref|XP_002512627.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223548588|gb|EEF50079.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 448

 Score =  512 bits (1318), Expect = e-142
 Identities = 262/466 (56%), Positives = 313/466 (67%), Gaps = 25/466 (5%)
 Frame = +3

Query: 336  MVLNSGISMSSR------PPEPVTDAPSVDQV--SEALWQLNLRSREQMXXXXXXXXXXX 491
            M  ++GI MS        PP PVT+ PS+      +A+WQ+NLRS E M           
Sbjct: 1    MDFDAGIPMSRTAPPPPPPPLPVTEDPSLSASLNEDAMWQMNLRSSETMDSGPYPEHPGE 60

Query: 492  XXXXXXXXXXXXXXXXXXXXXXYYIRTGLCRFGASCRFNHPPNRKLAIASARMKGEYPER 671
                                  YYIRTGLCRFGA+CRFNHPPNRKLAIA+ARMKGE+PER
Sbjct: 61   PDCS------------------YYIRTGLCRFGATCRFNHPPNRKLAIAAARMKGEFPER 102

Query: 672  MGQPDCQYYLRTGTCKFGVTCKFHHPRD-AGTDGRVLLNVLGYPLRPQEAECSYYLRTGQ 848
            +GQP+CQYYL+TGTCKFG TCKFHHP+D AG  GRV LN+LGYPLRP E EC+YYLRTGQ
Sbjct: 103  IGQPECQYYLKTGTCKFGATCKFHHPKDKAGIAGRVSLNILGYPLRPNEIECAYYLRTGQ 162

Query: 849  CKFGGTCKFHHPQPSNMMISL-SSPLYTSVQTPTAPGQPSYG--------ASFVSS---- 989
            CKFG TCKFHHPQP+N+M+ L  SP+Y +VQ+PT PGQ SY         ASF++S    
Sbjct: 163  CKFGSTCKFHHPQPTNVMVPLRGSPVYPTVQSPTTPGQQSYTGGVTNWSRASFITSPRWQ 222

Query: 990  --SGYAPLMLPQRVVSIPGWNTYSGQVGSVTSSESNRQPPGSSQIHGTSRLNDTPNMGSQ 1163
              S Y PL+LPQ VVS+PGWN YSGQ+GSV+S E  +Q  G+SQI+GTSR +++ N GSQ
Sbjct: 223  APSSYTPLILPQGVVSVPGWNAYSGQLGSVSSPEGQQQT-GNSQIYGTSRQSESVNTGSQ 281

Query: 1164 GQYSSYQHASLPEGYYAMQGGSVFPERPGQPECQFYMKTGDCKFGGVCKFHHPRERLIPA 1343
            G  S  +  S+P G+YA+Q  +VFPERPGQPECQFYMKTGDCKFG VC+FHHPRERLIPA
Sbjct: 282  GTLSPLRAGSMPVGFYALQRDNVFPERPGQPECQFYMKTGDCKFGAVCRFHHPRERLIPA 341

Query: 1344 PNCXXXXXXXXXXXXXXXCMFYSRYGICKFGPSCKFDHPMEVFS-NIPGSPSDDPVGRRI 1520
            P+C               C+FYSRYG+CKFGPSCKFDHPM +F+ N+    S D   RR+
Sbjct: 342  PDCVLSPIGLPLRPGEPLCIFYSRYGVCKFGPSCKFDHPMGIFTYNLSAPSSADAPVRRL 401

Query: 1521 LSSAPGTXXXXXXXXXXXXXXXTNPRRLSLSEARSMSSGDNKIEPE 1658
            L S+ G+               T PRRLSLSE R M SGD+ I+ E
Sbjct: 402  LGSSSGSAALTLSTEGLVDAGSTKPRRLSLSEPRQMPSGDDNIDTE 447


>ref|XP_002278934.2| PREDICTED: zinc finger CCCH domain-containing protein ZFN-like
            isoform 1 [Vitis vinifera]
          Length = 441

 Score =  511 bits (1315), Expect = e-142
 Identities = 266/465 (57%), Positives = 313/465 (67%), Gaps = 24/465 (5%)
 Frame = +3

Query: 336  MVLNSGISMSSRPPEPVTD----APSVDQVSEALWQLNLRSREQMXXXXXXXXXXXXXXX 503
            M  ++GI M   P   VT+    +PS++Q  +A+WQ+NLRS E M               
Sbjct: 1    MEFDAGIPM---PRGQVTEGSSLSPSLNQ--DAMWQMNLRSSETMESGPYPERPGEPDCS 55

Query: 504  XXXXXXXXXXXXXXXXXXYYIRTGLCRFGASCRFNHPPNRKLAIASARMKGEYPERMGQP 683
                              YYIRTGLCRFG +CRFNHPPNRKLAIA+ARMKGE+PERMGQP
Sbjct: 56   ------------------YYIRTGLCRFGITCRFNHPPNRKLAIATARMKGEFPERMGQP 97

Query: 684  DCQYYLRTGTCKFGVTCKFHHPRD-AGTDGRVLLNVLGYPLRPQEAECSYYLRTGQCKFG 860
            +CQYYL+TGTCKFG TCKFHHPRD AG  GRV LN+LGYPLRP E +C+YYLRTGQCKFG
Sbjct: 98   ECQYYLKTGTCKFGATCKFHHPRDKAGIAGRVSLNILGYPLRPDEIDCAYYLRTGQCKFG 157

Query: 861  GTCKFHHPQPSNMMISL-SSPLYTSVQTPTAPGQPSYG----------ASFVSS------ 989
             TCKFHHPQPS+MM+SL  SP+Y SV +PT PGQ SY           ASF+ S      
Sbjct: 158  STCKFHHPQPSSMMVSLRGSPVYPSVPSPTTPGQQSYAGGITNWPLSRASFIPSPRWQAP 217

Query: 990  SGYAPLMLPQRVVSIPGWNTYSGQVGSVTSSESNRQPPGSSQIHGTSRLNDTPNMGSQGQ 1169
            S YAPLMLPQ VVS+PGWN YSGQ+GS   SES +Q  G++QI+GTSR ++ PN GSQG 
Sbjct: 218  SSYAPLMLPQGVVSVPGWNAYSGQLGS--PSESQQQTGGNNQIYGTSRQSEQPNTGSQGT 275

Query: 1170 YSSYQHASLPEGYYAMQGGSVFPERPGQPECQFYMKTGDCKFGGVCKFHHPRERLIPAPN 1349
            +S Y+  S+P G+YA+Q  +VFPERPGQPECQFYMKTGDCKFG VC+FHHPRERLIP P+
Sbjct: 276  FSPYRSGSVPIGFYALQRENVFPERPGQPECQFYMKTGDCKFGAVCRFHHPRERLIPTPD 335

Query: 1350 CXXXXXXXXXXXXXXXCMFYSRYGICKFGPSCKFDHPMEVFS-NIPGSPS-DDPVGRRIL 1523
            C               C+FYSRYGICKFGPSCKFDHPM +F+ N+  S S D PV RR+L
Sbjct: 336  CVLSPIGLPLRPGEPLCIFYSRYGICKFGPSCKFDHPMGIFAYNLSASSSADAPVVRRLL 395

Query: 1524 SSAPGTXXXXXXXXXXXXXXXTNPRRLSLSEARSMSSGDNKIEPE 1658
             S+ G+               T PRRLSL E R M  GD+ I+ E
Sbjct: 396  GSSSGSAALTLSSDGLVEAGSTKPRRLSLPETRQMPPGDDNIDTE 440


>ref|XP_002328972.1| predicted protein [Populus trichocarpa] gi|222839206|gb|EEE77557.1|
            predicted protein [Populus trichocarpa]
          Length = 425

 Score =  508 bits (1308), Expect = e-141
 Identities = 255/431 (59%), Positives = 298/431 (69%), Gaps = 18/431 (4%)
 Frame = +3

Query: 414  SEALWQLNLRSREQMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYYIRTGLCRFGA 593
            S+A+WQ+NLRS E M                                 YYIRTGLCRFGA
Sbjct: 11   SDAMWQMNLRSSETMEAGPYPERPGEPDCS------------------YYIRTGLCRFGA 52

Query: 594  SCRFNHPPNRKLAIASARMKGEYPERMGQPDCQYYLRTGTCKFGVTCKFHHPRD-AGTDG 770
            +CRFNHPPNRKLAIA+ARMKGE+PER+GQP+CQYYL+TGTCKFG TCKFHHPRD AG  G
Sbjct: 53   TCRFNHPPNRKLAIAAARMKGEFPERIGQPECQYYLKTGTCKFGATCKFHHPRDKAGISG 112

Query: 771  RVLLNVLGYPLRPQEAECSYYLRTGQCKFGGTCKFHHPQPSNMMISL-SSPLYTSVQTPT 947
            RV LN+LGYPL+P E EC+YYLRTGQCKFG TCKFHHPQP+NMM+ L  SP+Y +V +PT
Sbjct: 113  RVSLNILGYPLQPNEIECAYYLRTGQCKFGSTCKFHHPQPTNMMVPLRGSPIYPTVSSPT 172

Query: 948  APGQPSYG---------ASFVSS------SGYAPLMLPQRVVSIPGWNTYSGQVGSVTSS 1082
             PGQ SY          ASF++S      S Y PL+LPQ VVS+PGWN YSGQ+GSV+S 
Sbjct: 173  TPGQQSYPGGLATTWSRASFITSPRWQAPSSYTPLILPQGVVSVPGWNAYSGQLGSVSSP 232

Query: 1083 ESNRQPPGSSQIHGTSRLNDTPNMGSQGQYSSYQHASLPEGYYAMQGGSVFPERPGQPEC 1262
            ES +Q  G+SQI+GTSR +++ N GSQG +S Y+  S P G+YA+Q  SVFPERPGQPEC
Sbjct: 233  ESQQQT-GNSQIYGTSRHSESVNAGSQGTFSPYRSGSAPLGFYALQRESVFPERPGQPEC 291

Query: 1263 QFYMKTGDCKFGGVCKFHHPRERLIPAPNCXXXXXXXXXXXXXXXCMFYSRYGICKFGPS 1442
            QFYMKTGDCKFG VC+FHHPRERLIPAP+C               C+FYSRYGICKFGPS
Sbjct: 292  QFYMKTGDCKFGAVCRFHHPRERLIPAPDCVLSPIGLPLRPGEPLCIFYSRYGICKFGPS 351

Query: 1443 CKFDHPMEVFS-NIPGSPSDDPVGRRILSSAPGTXXXXXXXXXXXXXXXTNPRRLSLSEA 1619
            CKFDHPM VF+ N+  S S D   RR+L S+ G+               T PRRLSLSE 
Sbjct: 352  CKFDHPMGVFTYNLTASSSADAPVRRLLGSSSGSPGLTLSSEGLVEAGPTKPRRLSLSEP 411

Query: 1620 RSMSSGDNKIE 1652
            R M  GD+ I+
Sbjct: 412  RQMPPGDDNID 422


>ref|XP_003534517.1| PREDICTED: zinc finger CCCH domain-containing protein ZFN-like
            isoform 1 [Glycine max]
          Length = 428

 Score =  505 bits (1301), Expect = e-140
 Identities = 250/437 (57%), Positives = 301/437 (68%), Gaps = 17/437 (3%)
 Frame = +3

Query: 399  SVDQVSEALWQLNLRSREQMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYYIRTGL 578
            S D VS+A+WQ+NLRS E M                                 YYIRTGL
Sbjct: 13   SYDVVSDAMWQINLRSSETMESGPYPEHPGEPDCS------------------YYIRTGL 54

Query: 579  CRFGASCRFNHPPNRKLAIASARMKGEYPERMGQPDCQYYLRTGTCKFGVTCKFHHPRD- 755
            CRFGA+CRFNHPPNRKLAIA+ARMKGE+PER+GQP+CQYYL+TGTCKFG TC+FHHPRD 
Sbjct: 55   CRFGATCRFNHPPNRKLAIAAARMKGEFPERIGQPECQYYLKTGTCKFGATCRFHHPRDK 114

Query: 756  AGTDGRVLLNVLGYPLRPQEAECSYYLRTGQCKFGGTCKFHHPQPSNMMISL-SSPLYTS 932
            AG  GRV +N+LGYPLRP E EC+YYLRTGQCKFG TCKFHHPQP+NM++S+ SSP+Y +
Sbjct: 115  AGIAGRVAMNILGYPLRPNEPECAYYLRTGQCKFGNTCKFHHPQPNNMVLSMRSSPVYPT 174

Query: 933  VQTPTAPGQPSYG--------ASFVSS------SGYAPLMLPQRVVSIPGWNTYSGQVGS 1070
            V +PT PGQ SY         +S++ S      S YAPL+LPQ +VS+PGW+ YSGQ+GS
Sbjct: 175  VHSPTTPGQQSYATGITNWSSSSYIPSPRWQGPSSYAPLILPQGMVSVPGWSAYSGQMGS 234

Query: 1071 VTSSESNRQPPGSSQIHGTSRLNDTPNMGSQGQYSSYQHASLPEGYYAMQGGSVFPERPG 1250
                +S +Q  G+ Q +GTSR ++  N GSQG YS ++  S+P G+YA+Q  ++FPERP 
Sbjct: 235  ----DSPQQTMGNGQSYGTSRQSEPANSGSQGAYSQFRSGSVPVGFYALQRENIFPERPD 290

Query: 1251 QPECQFYMKTGDCKFGGVCKFHHPRERLIPAPNCXXXXXXXXXXXXXXXCMFYSRYGICK 1430
            QPECQFYMKTGDCKFG VC+FHHPRER+IPAP+C               C+FYSRYGICK
Sbjct: 291  QPECQFYMKTGDCKFGAVCRFHHPRERMIPAPDCVLSPIGLPLRPGEPLCVFYSRYGICK 350

Query: 1431 FGPSCKFDHPMEVFS-NIPGSPSDDPVGRRILSSAPGTXXXXXXXXXXXXXXXTNPRRLS 1607
            FGPSCKFDHPM VF+ NI  SPS D  GRR+L S+ GT                NPRRLS
Sbjct: 351  FGPSCKFDHPMGVFTYNISASPSADAPGRRMLGSSSGTSALNLSSEGLVESGSANPRRLS 410

Query: 1608 LSEARSMSSGDNKIEPE 1658
            LSE R + SGD+ I+ E
Sbjct: 411  LSETRQIPSGDDNIDEE 427


>ref|XP_002325901.1| predicted protein [Populus trichocarpa] gi|222862776|gb|EEF00283.1|
            predicted protein [Populus trichocarpa]
          Length = 414

 Score =  501 bits (1291), Expect = e-139
 Identities = 252/430 (58%), Positives = 295/430 (68%), Gaps = 18/430 (4%)
 Frame = +3

Query: 417  EALWQLNLRSREQMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYYIRTGLCRFGAS 596
            +A+WQ+NLRS E M                                 YYIRTGLCRFG +
Sbjct: 1    DAMWQMNLRSSETMEAGPYPERPGEPDCS------------------YYIRTGLCRFGPT 42

Query: 597  CRFNHPPNRKLAIASARMKGEYPERMGQPDCQYYLRTGTCKFGVTCKFHHPRD-AGTDGR 773
            CRFNHPPNRKLAIA+ARMKGE+PER+GQP+CQYYL+TGTCKFG TCKFHHPRD AG  GR
Sbjct: 43   CRFNHPPNRKLAIAAARMKGEFPERIGQPECQYYLKTGTCKFGATCKFHHPRDKAGVSGR 102

Query: 774  VLLNVLGYPLRPQEAECSYYLRTGQCKFGGTCKFHHPQPSNMMISL-SSPLYTSVQTPTA 950
            V LN+LGYPLR  E EC+YYLRTGQCKFG TCKFHHPQP+N+M+ L  SP+Y +V +PT 
Sbjct: 103  VSLNILGYPLRLNEMECAYYLRTGQCKFGSTCKFHHPQPTNVMVPLRGSPVYPTVNSPTT 162

Query: 951  PGQPSYG---------ASFVSS------SGYAPLMLPQRVVSIPGWNTYSGQVGSVTSSE 1085
            PGQ SY          ASF++S      S Y PL+LPQ VVS+PGWN YSGQVGSV+S E
Sbjct: 163  PGQQSYPGGLATNWSRASFITSPRWQAPSNYTPLILPQGVVSVPGWNAYSGQVGSVSSPE 222

Query: 1086 SNRQPPGSSQIHGTSRLNDTPNMGSQGQYSSYQHASLPEGYYAMQGGSVFPERPGQPECQ 1265
            S +Q  G+SQI+GTSR N++ N GSQG +S Y+  S+P G+YA+Q  SVFPERPGQPECQ
Sbjct: 223  SQQQT-GNSQIYGTSRQNESVNAGSQGTFSPYRSDSVPMGFYALQRESVFPERPGQPECQ 281

Query: 1266 FYMKTGDCKFGGVCKFHHPRERLIPAPNCXXXXXXXXXXXXXXXCMFYSRYGICKFGPSC 1445
            FYMKTGDCKFG VC+FHHPRERLIPAP+C               C+FYSRYGICKFGPSC
Sbjct: 282  FYMKTGDCKFGAVCRFHHPRERLIPAPDCVLSAIGLPLRPGEPLCIFYSRYGICKFGPSC 341

Query: 1446 KFDHPMEVFS-NIPGSPSDDPVGRRILSSAPGTXXXXXXXXXXXXXXXTNPRRLSLSEAR 1622
            KF HPM +F+ N+  S S D   RR+L S+ G+               T PRRLSLSE R
Sbjct: 342  KFHHPMGIFTYNLTASSSADAPVRRLLGSSSGSAALTLSSEGLVEAGSTKPRRLSLSEPR 401

Query: 1623 SMSSGDNKIE 1652
             M  GD+ I+
Sbjct: 402  QMPPGDDNID 411


Top