BLASTX nr result

ID: Lithospermum22_contig00002339 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00002339
         (1266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACF17659.1| putative 3-isopropylmalate dehydrogenase small su...   281   9e-81
ref|XP_003528346.1| PREDICTED: 3-isopropylmalate dehydratase sma...   256   1e-74
ref|XP_004152394.1| PREDICTED: 3-isopropylmalate dehydratase sma...   260   2e-74
ref|XP_003531705.1| PREDICTED: 3-isopropylmalate dehydratase sma...   253   1e-73
ref|XP_002530662.1| 3-isopropylmalate dehydratase, putative [Ric...   253   5e-73

>gb|ACF17659.1| putative 3-isopropylmalate dehydrogenase small subunit [Capsicum
            annuum]
          Length = 252

 Score =  281 bits (719), Expect(2) = 9e-81
 Identities = 143/233 (61%), Positives = 168/233 (72%), Gaps = 3/233 (1%)
 Frame = -1

Query: 1089 MAASSALFRPTAATTLNVTRPRFMAVTPRSSLKVPTDHLNYQFKSFKSKTASDRAA---R 919
            MAAS+AL     A   +  +PR  ++ P  S+K+P+   NY   S  + T  +      R
Sbjct: 1    MAASAALSNSITAFKPSPCQPRAASINPLPSIKLPSISSNYPLISHFAPTPKNPTVTPLR 60

Query: 918  LLCTSNPXXXXXXXTFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPEEYKKLGSYAMCGLP 739
                + P       TFHGLCYVVGDNIDTDQIIPAEYLTLVPSNP+EYKKLGSYA+CGLP
Sbjct: 61   SAAAAAPETTNSSTTFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYKKLGSYALCGLP 120

Query: 738  STYETRFVDPDEFTSKYTIIIAGDNFGCGSSREHXXXXXXXXXXXXXXAESYARIFFRNS 559
            S+Y TRFV+P EFTSKY+I+I GDNFGCGSSREH              AESYARIFFRNS
Sbjct: 121  SSYPTRFVEPGEFTSKYSIVIGGDNFGCGSSREHAPVALGAAGVAAVVAESYARIFFRNS 180

Query: 558  VATGEVYPFESEGRLCDECKTGDVVTIELGQNKLINHTSGKEYTLKPIGDAGP 400
            V+TGEVYP ESE R+C+ECKTGDVVT+E G+++LINHT+GKEY LKPIGDAGP
Sbjct: 181  VSTGEVYPLESEVRICEECKTGDVVTVEFGESRLINHTTGKEYKLKPIGDAGP 233



 Score = 47.0 bits (110), Expect(2) = 9e-81
 Identities = 21/24 (87%), Positives = 22/24 (91%)
 Frame = -3

Query: 334 PIGDAGPVIEAGGIFDYARKAGMM 263
           PIGDAGPVIEAGGIF YARK GM+
Sbjct: 227 PIGDAGPVIEAGGIFAYARKTGMI 250


>ref|XP_003528346.1| PREDICTED: 3-isopropylmalate dehydratase small subunit-like [Glycine
            max]
          Length = 246

 Score =  256 bits (653), Expect(2) = 1e-74
 Identities = 140/230 (60%), Positives = 157/230 (68%), Gaps = 5/230 (2%)
 Frame = -1

Query: 1074 ALFRPTAATTLNVTRPRFMAVTPRSSLKVPTDH-LNYQFKSF---KSKTASDRAARLLCT 907
            ALF  TA        PR +A    + L +   H L + F SF   KS    +R A  L T
Sbjct: 2    ALFSATATVL-----PRNLAFASSTKLSLSHSHSLLHHFLSFPTPKSSNPRNRVAISLQT 56

Query: 906  SNPXXXXXXXT-FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPEEYKKLGSYAMCGLPSTY 730
                        FHGLCYVVGDNIDTDQIIPAEYLTLVPS P+EY+KLGSYA+ GLP+TY
Sbjct: 57   PRAQSGASASASFHGLCYVVGDNIDTDQIIPAEYLTLVPSKPDEYEKLGSYALVGLPATY 116

Query: 729  ETRFVDPDEFTSKYTIIIAGDNFGCGSSREHXXXXXXXXXXXXXXAESYARIFFRNSVAT 550
              RFVDP E  +KY+I+I G NFGCGSSREH              AESYARIFFRNSVAT
Sbjct: 117  AARFVDPGETKTKYSIVIGGANFGCGSSREHAPVALGASGAAAVVAESYARIFFRNSVAT 176

Query: 549  GEVYPFESEGRLCDECKTGDVVTIELGQNKLINHTSGKEYTLKPIGDAGP 400
            GEVYP ESEGRLC+EC TGDVVTIELG+++LINHT+GKEY LKPIGDAGP
Sbjct: 177  GEVYPLESEGRLCEECTTGDVVTIELGESRLINHTTGKEYRLKPIGDAGP 226



 Score = 52.0 bits (123), Expect(2) = 1e-74
 Identities = 23/27 (85%), Positives = 25/27 (92%)
 Frame = -3

Query: 334 PIGDAGPVIEAGGIFDYARKAGMMPTR 254
           PIGDAGPVIEAGGIF YARK GM+P+R
Sbjct: 220 PIGDAGPVIEAGGIFAYARKTGMIPSR 246


>ref|XP_004152394.1| PREDICTED: 3-isopropylmalate dehydratase small subunit-like [Cucumis
            sativus] gi|449525429|ref|XP_004169720.1| PREDICTED:
            3-isopropylmalate dehydratase small subunit-like [Cucumis
            sativus]
          Length = 248

 Score =  260 bits (664), Expect(2) = 2e-74
 Identities = 137/233 (58%), Positives = 164/233 (70%), Gaps = 3/233 (1%)
 Frame = -1

Query: 1089 MAASSALFRPTAATTLNVTRPRFMAVTPRSSLKVPTDHLNYQFK-SFKSKTASDRAARLL 913
            MAAS  L +   A +   + P    ++   +LK  + H N+ F  S     A  R A ++
Sbjct: 1    MAASLFLSQSPIAISTPRSSPSISLLSSPQTLKFRSSHSNFLFNLSIAVSHAPSRLATII 60

Query: 912  --CTSNPXXXXXXXTFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPEEYKKLGSYAMCGLP 739
               T++P        FHGLCYVVGDNIDTDQIIPAEYLTLVPSNP EY+KLGSYA+ GLP
Sbjct: 61   PRATASPSSTA----FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGLP 116

Query: 738  STYETRFVDPDEFTSKYTIIIAGDNFGCGSSREHXXXXXXXXXXXXXXAESYARIFFRNS 559
            S+Y TR+V+ +E  +KY+IIIAGDNFGCGSSREH              AESYARIFFRNS
Sbjct: 117  SSYSTRYVESEEMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRNS 176

Query: 558  VATGEVYPFESEGRLCDECKTGDVVTIELGQNKLINHTSGKEYTLKPIGDAGP 400
            VATGE+YP ESE R+C+ECKTGDVVTIEL +++LINHT+GKEY LKPIGDAGP
Sbjct: 177  VATGEIYPLESETRICEECKTGDVVTIELAESRLINHTTGKEYKLKPIGDAGP 229



 Score = 47.0 bits (110), Expect(2) = 2e-74
 Identities = 21/24 (87%), Positives = 22/24 (91%)
 Frame = -3

Query: 334 PIGDAGPVIEAGGIFDYARKAGMM 263
           PIGDAGPVIEAGGIF YARK GM+
Sbjct: 223 PIGDAGPVIEAGGIFAYARKTGMI 246


>ref|XP_003531705.1| PREDICTED: 3-isopropylmalate dehydratase small subunit-like [Glycine
            max]
          Length = 245

 Score =  253 bits (645), Expect(2) = 1e-73
 Identities = 134/235 (57%), Positives = 167/235 (71%), Gaps = 6/235 (2%)
 Frame = -1

Query: 1086 AASSALFRPTAATTLNVTR-----PRFMAV-TPRSSLKVPTDHLNYQFKSFKSKTASDRA 925
            +A++ L R  A T L+++      PRF++  TP+SS   P + +    ++ ++++A+  +
Sbjct: 6    SAATVLPRNLAFTKLSLSHSHTLLPRFLSFPTPKSSN--PRNRVAVSLQTPRAQSAASAS 63

Query: 924  ARLLCTSNPXXXXXXXTFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPEEYKKLGSYAMCG 745
                            +FHGLCYVVGDNIDTDQIIPAEYLTLVPS P+EY+KLGSYA+ G
Sbjct: 64   PSA-------------SFHGLCYVVGDNIDTDQIIPAEYLTLVPSKPDEYEKLGSYALIG 110

Query: 744  LPSTYETRFVDPDEFTSKYTIIIAGDNFGCGSSREHXXXXXXXXXXXXXXAESYARIFFR 565
            LP+TY TRF++P E  +KY I+I G NFGCGSSREH              AESYARIFFR
Sbjct: 111  LPATYATRFIEPGEIKTKYAIVIGGANFGCGSSREHAPVALGASGAAAVVAESYARIFFR 170

Query: 564  NSVATGEVYPFESEGRLCDECKTGDVVTIELGQNKLINHTSGKEYTLKPIGDAGP 400
            NSVATGEVYP ESEGRLC+EC TGDVVTIELG+++LINHT+GKEY LKPIGDAGP
Sbjct: 171  NSVATGEVYPLESEGRLCEECTTGDVVTIELGESRLINHTTGKEYRLKPIGDAGP 225



 Score = 52.0 bits (123), Expect(2) = 1e-73
 Identities = 23/27 (85%), Positives = 25/27 (92%)
 Frame = -3

Query: 334 PIGDAGPVIEAGGIFDYARKAGMMPTR 254
           PIGDAGPVIEAGGIF YARK GM+P+R
Sbjct: 219 PIGDAGPVIEAGGIFAYARKTGMIPSR 245


>ref|XP_002530662.1| 3-isopropylmalate dehydratase, putative [Ricinus communis]
           gi|223529795|gb|EEF31731.1| 3-isopropylmalate
           dehydratase, putative [Ricinus communis]
          Length = 254

 Score =  253 bits (646), Expect(2) = 5e-73
 Identities = 122/176 (69%), Positives = 140/176 (79%)
 Frame = -1

Query: 927 AARLLCTSNPXXXXXXXTFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPEEYKKLGSYAMC 748
           A R    S+        TFHGLCYVVGDNIDTDQIIPAEYLTLVPSNP EY+KLGSYA+ 
Sbjct: 57  APRAAAASSSNLNSNSTTFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPAEYEKLGSYALI 116

Query: 747 GLPSTYETRFVDPDEFTSKYTIIIAGDNFGCGSSREHXXXXXXXXXXXXXXAESYARIFF 568
           GLP++Y+TRF++P+E  +KYTI+I GDNFGCGSSREH              AESYARIFF
Sbjct: 117 GLPASYKTRFMEPNEMKTKYTIVIGGDNFGCGSSREHAPVALGAAGVAAVVAESYARIFF 176

Query: 567 RNSVATGEVYPFESEGRLCDECKTGDVVTIELGQNKLINHTSGKEYTLKPIGDAGP 400
           RNSVATGE+YP E+E R+C+ECKTGDVVTIEL +N+LINHT+GKEY LKPIGDAGP
Sbjct: 177 RNSVATGEIYPLETEVRICEECKTGDVVTIELAENRLINHTTGKEYKLKPIGDAGP 232



 Score = 49.3 bits (116), Expect(2) = 5e-73
 Identities = 22/29 (75%), Positives = 25/29 (86%)
 Frame = -3

Query: 334 PIGDAGPVIEAGGIFDYARKAGMMPTRVA 248
           PIGDAGPVIEAGGIF YAR  GM+P++ A
Sbjct: 226 PIGDAGPVIEAGGIFAYARSTGMIPSQSA 254


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