BLASTX nr result
ID: Lithospermum22_contig00002336
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00002336
(1516 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002523870.1| 5'->3' exoribonuclease, putative [Ricinus co... 496 e-138
ref|XP_003606089.1| 5'-3' exoribonuclease [Medicago truncatula] ... 489 e-135
ref|XP_002306919.1| predicted protein [Populus trichocarpa] gi|2... 462 e-128
ref|XP_002510514.1| 5'->3' exoribonuclease, putative [Ricinus co... 462 e-127
gb|AAF87130.1|AC006434_26 F10A5.15 [Arabidopsis thaliana] 460 e-127
>ref|XP_002523870.1| 5'->3' exoribonuclease, putative [Ricinus communis]
gi|223536958|gb|EEF38596.1| 5'->3' exoribonuclease,
putative [Ricinus communis]
Length = 993
Score = 496 bits (1278), Expect = e-138
Identities = 269/523 (51%), Positives = 349/523 (66%), Gaps = 23/523 (4%)
Frame = -3
Query: 1502 MGVPSFYKWLVNKYPKIRVDALEEKGGSADASLKNPNDLEFDNLYLDMNGIIHPCFHPED 1323
MGVP+FYKWLVNKYP + + NPN LEFDNLYLDMNGIIHPCFHP+D
Sbjct: 1 MGVPAFYKWLVNKYPNV-------------ITSPNPNGLEFDNLYLDMNGIIHPCFHPDD 47
Query: 1322 SECGPTSFEEVFENIYEYIDRIFNIVRPRKLLYLAIDGVAPRAKMNQQRTRRFRNAKDNE 1143
PT+F+EVF NIY+YID IF+IVRPR LLYLAIDGVAPRAKMNQQR+RRFRNAKD E
Sbjct: 48 HPSPPTTFDEVFNNIYKYIDHIFSIVRPRNLLYLAIDGVAPRAKMNQQRSRRFRNAKDTE 107
Query: 1142 IADXXXXXXXXXXXLQGKIVLPKEEETEVSDSNVITPGTEFMQXXXXXXXXXXXSRMCVN 963
IA+ +QGK VLPK+ +EVSDSN+ITPGTEFM S + +
Sbjct: 108 IAEAEEERLRKEYEIQGKQVLPKQY-SEVSDSNIITPGTEFMFTLSIKLQEYMISNINSD 166
Query: 962 SSWKKVQVILSNANVPGEGEHKVMSFIRAQRGSPGYDPNTRHCLYGLDADLIMLALATHE 783
+WK ++VILS+A+VPGEGEHK+MSFIR QR P Y+PNTRHCLYGLDADLIMLALA+HE
Sbjct: 167 PAWKAIKVILSDASVPGEGEHKIMSFIRQQRMLPDYNPNTRHCLYGLDADLIMLALASHE 226
Query: 782 IHFSILREKVILNEIYQNTPARKMIVQKPGNHNQIGTQ-----------DSPITCKKVME 636
+HFSILRE V+L + + +Q + G+ D+ +
Sbjct: 227 VHFSILREVVLLQQPQSICLSAHTSLQGRIEFGEFGSSENKTKRRFSNDDNTLAKDVSFI 286
Query: 635 KKPYEFLHIWILREYLELDLKITDPPKDFHEDLERLIDDFIFICFFAGNDFLPHMPSLEI 456
+KPY+FLH+WILR+YL+L++ I DPP++F D ER+IDDF+F+CFFAGNDF+P++P+L+I
Sbjct: 287 EKPYQFLHVWILRDYLKLEMDIYDPPENFTFDSERIIDDFVFMCFFAGNDFIPNLPTLQI 346
Query: 455 HEGAIDLMMHVYRKEFKNLGGYLVDMSRVNDKKDGFWKQSRVEKFILAVGSFEEQIFRKR 276
HE A+DL+M VY+K FK LGGYLVD+ +VN K+ + RVEKFIL +G++EE IF+KR
Sbjct: 347 HERAVDLLMTVYKKNFKKLGGYLVDVHQVNSLKNDYLDLKRVEKFILLIGAYEEMIFKKR 406
Query: 275 AGIRERKIRRIL----LDDAKAID--EAQEQLNESLSSFNAS---NSDNISNGVQESSLG 123
+ +RER +R++ +AK +D Q+ L S SS +A + D +S SL
Sbjct: 407 SELRERMLRKLCQHSDAANAKELDGNVEQDMLKISFSSLDAKAQISEDLVSVSAVSISLW 466
Query: 122 PRLCNANNTALENTRELQLKLREHLRNSADTFKQ---RIDTDK 3
+ L+NT+ + +L+ LR +D F+ R DT K
Sbjct: 467 -------FSVLQNTKRFKEELKARLRQKSDLFQNGGFRADTVK 502
>ref|XP_003606089.1| 5'-3' exoribonuclease [Medicago truncatula]
gi|355507144|gb|AES88286.1| 5'-3' exoribonuclease
[Medicago truncatula]
Length = 866
Score = 489 bits (1258), Expect = e-135
Identities = 257/501 (51%), Positives = 337/501 (67%), Gaps = 8/501 (1%)
Frame = -3
Query: 1502 MGVPSFYKWLVNKYPKIRVDALEEKGGSADASLKNPNDLEFDNLYLDMNGIIHPCFHPED 1323
MGVPSFY+WL+NKYPK A E+ + N ++E+DNLYLDMN IIHPCFHP D
Sbjct: 1 MGVPSFYRWLLNKYPK----AFEDINPNT-----NTTNVEYDNLYLDMNSIIHPCFHPND 51
Query: 1322 SECG----PTSFEEVFENIYEYIDRIFNIVRPRKLLYLAIDGVAPRAKMNQQRTRRFRNA 1155
+ PT+F EVF N++EYIDR+ I +PRKLLY+AIDGVAPRAKMNQQRTRRFRN
Sbjct: 52 DDNNNGTPPTTFVEVFANMFEYIDRLVTIAKPRKLLYMAIDGVAPRAKMNQQRTRRFRNV 111
Query: 1154 KDNEIADXXXXXXXXXXXLQGKIVLPKEEETEVSDSNVITPGTEFMQXXXXXXXXXXXSR 975
KD+E+ + ++GK VLPK+E EVSDSN+ITPGT+FM S+
Sbjct: 112 KDDEMREVEEERLRKEFEMEGKQVLPKQE-CEVSDSNIITPGTDFMHQISNALKSYISSK 170
Query: 974 MCVNSSWKKVQVILSNANVPGEGEHKVMSFIRAQRGSPGYDPNTRHCLYGLDADLIMLAL 795
+ + WK + VILS+ANVPGEGEHKVMSFIR QRG P YDPNT HCLYG DADLIML L
Sbjct: 171 ISSDPLWKGIMVILSDANVPGEGEHKVMSFIRKQRGLPDYDPNTVHCLYGSDADLIMLGL 230
Query: 794 ATHEIHFSILREKVILNEIYQNTPARKMIVQKPGNHNQIGTQDSPITCKKVMEKKPYEF- 618
+ HE HFSILRE ++ D P +K+ P F
Sbjct: 231 SCHEPHFSILREVIL---------------------------DPPDRYEKLPPNAPMRFK 263
Query: 617 -LHIWILREYLELDLKITDPPKDFHEDLERLIDDFIFICFFAGNDFLPHMPSLEIHEGAI 441
LHIW+LREYLE+++KI DPPK+F DLER++DDFIFICFF+GNDFLPH+PSL IHE AI
Sbjct: 264 LLHIWLLREYLEIEMKIEDPPKNFVFDLERIVDDFIFICFFSGNDFLPHLPSLYIHEDAI 323
Query: 440 DLMMHVYRKEFKNLGGYLVDMSRVNDKKDGFWKQSRVEKFILAVGSFEEQIFRKRAGIRE 261
DL+M VY+KEF +GGYLVD++++ +K + K SRVEKF+L VG++EE+IF KR IR+
Sbjct: 324 DLLMTVYKKEFSKIGGYLVDINKIGEKHGAYVKLSRVEKFVLMVGTYEEKIFSKRTAIRD 383
Query: 260 RKIRRILLDDAKAIDEAQEQLN-ESLSSFNASNSDNISNGVQESSLGPRLC-NANNTALE 87
+K+RR++ D+ + QE+LN F+ NS N + ++++ +C ++ L+
Sbjct: 384 KKLRRLISDNE---NSKQEELNSHDCMDFDNENSSNCALRIKKAEASDNVCPQSDEEILK 440
Query: 86 NTRELQLKLREHLRNSADTFK 24
NT++L+ KL++ +++ D FK
Sbjct: 441 NTKDLKEKLKKCIKDKGDLFK 461
>ref|XP_002306919.1| predicted protein [Populus trichocarpa] gi|222856368|gb|EEE93915.1|
predicted protein [Populus trichocarpa]
Length = 998
Score = 462 bits (1190), Expect = e-128
Identities = 266/544 (48%), Positives = 336/544 (61%), Gaps = 49/544 (9%)
Frame = -3
Query: 1502 MGVPSFYKWLVNKYPKIRVDALEEKGG-------SADASLKNPNDLEFDNLYLDMNGIIH 1344
MGVP+FY+WL KYP + VD +EE+ D S NPN++E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLAEKYPLVVVDVIEEEPVVIEGVKIPVDTSKPNPNNIEYDNLYLDMNGIIH 60
Query: 1343 PCFHPEDSECGPTSFEEVFENIYEYIDRIFNIVRPRKLLYLAIDGVAPRAKMNQQRTRRF 1164
PCFHPED PTSF EVF+ +++YIDR+F +VRPRKLLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 61 PCFHPEDRP-SPTSFGEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 1163 RNAKDNEIADXXXXXXXXXXXLQGKIVLPKEEETEVSDSNVITPGTEFMQXXXXXXXXXX 984
R AKD A +G+ LP +E ++ DSNVITPGTEFM
Sbjct: 120 RAAKDASDAAAEEERLREEFEREGR-KLPPKETSQTFDSNVITPGTEFMAVLSIALQYYI 178
Query: 983 XSRMCVNSSWKKVQVILSNANVPGEGEHKVMSFIRAQRGSPGYDPNTRHCLYGLDADLIM 804
R+ + WKK++V+LS+ANVPGEGEHKVMS+IR QR PGYDPNTRHCLYGLDADLIM
Sbjct: 179 HLRLNYDPGWKKIKVVLSDANVPGEGEHKVMSYIRLQRNLPGYDPNTRHCLYGLDADLIM 238
Query: 803 LALATHEIHFSILREKVIL----NEIYQNTPARKMIVQKPGNHNQIGTQDSPITCKKVME 636
LALATHE+HFSILRE V ++ + A + G + + +
Sbjct: 239 LALATHEVHFSILREIVFTPGQQDKCFICGQAGHLAAACEGKAKRKAGEFDEKGNDVAVP 298
Query: 635 KKPYEFLHIWILREYLELDLKITDPPKDFHEDLERLIDDFIFICFFAGNDFLPHMPSLEI 456
KKPY+FL+IW LREYLE + +I +PP F DLER +DDFIFICFF GNDFLPHMP+LEI
Sbjct: 299 KKPYQFLNIWTLREYLEYEFRIPNPP--FEIDLERTVDDFIFICFFVGNDFLPHMPTLEI 356
Query: 455 HEGAIDLMMHVYRKEFKNLGGYLVDMSRVNDKKDGFWKQSRVEKFILAVGSFEEQIFRKR 276
EGAI+L+M VY+KEF+ LGGYL D S+ N SRVE FI AVG++E++IF+KR
Sbjct: 357 REGAINLLMAVYKKEFRVLGGYLTDGSKPN--------LSRVEHFIQAVGAYEDKIFQKR 408
Query: 275 AGIRERKIRRILLD--DAKAIDEAQEQLN-ESL----------------------SSFNA 171
A + +R+ RI + A+ D+ Q Q ESL ++
Sbjct: 409 ARLHQRQAERIKREKTQARRGDDVQPQHQPESLVAVTQFRGSRLASAPTPSPYQDDGTHS 468
Query: 170 SNSDNISNGVQE---------SSLGPRLCNANN----TALENTRELQLKLREHLRNSADT 30
SD + VQ +++G + A N A EN EL+ KL+E LR +D
Sbjct: 469 QTSDGKGSSVQSRKVARLSSTANIGAAIVEAENCLEIEAHENKEELKTKLKESLREKSDV 528
Query: 29 FKQR 18
F +
Sbjct: 529 FNSK 532
>ref|XP_002510514.1| 5'->3' exoribonuclease, putative [Ricinus communis]
gi|223551215|gb|EEF52701.1| 5'->3' exoribonuclease,
putative [Ricinus communis]
Length = 1113
Score = 462 bits (1188), Expect = e-127
Identities = 273/562 (48%), Positives = 343/562 (61%), Gaps = 67/562 (11%)
Frame = -3
Query: 1502 MGVPSFYKWLVNKYPKIRVDALEEKGG-------SADASLKNPNDLEFDNLYLDMNGIIH 1344
MGVP+FY+WL KYP + VDA+EE+ DAS NPN++E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLAEKYPLVVVDAIEEEPVVIDGVKIPVDASRPNPNNIEYDNLYLDMNGIIH 60
Query: 1343 PCFHPEDSECGPTSFEEVFENIYEYIDRIFNIVRPRKLLYLAIDGVAPRAKMNQQRTRRF 1164
PCFHPED PTSFEEVF+ +++YIDR+F +VRPRKLLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 61 PCFHPEDRP-SPTSFEEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 1163 RNAKDNEIADXXXXXXXXXXXLQGKIVLPKEEETEVSDSNVITPGTEFMQXXXXXXXXXX 984
R AKD E A +G+ LP +E ++V DSN+ITPGTEFM
Sbjct: 120 RAAKDREEAAAEEERLRQEFEREGR-KLPPKESSQVFDSNIITPGTEFMAVLSIALQYYI 178
Query: 983 XSRMCVNSSWKKVQVILSNANVPGEGEHKVMSFIRAQRGSPGYDPNTRHCLYGLDADLIM 804
R+ + WKKV+VILS+ANVPGEGEHKVMS+IR QR PGYDPNTRHCLYGLDADLIM
Sbjct: 179 HLRLNNDPGWKKVKVILSDANVPGEGEHKVMSYIRLQRNLPGYDPNTRHCLYGLDADLIM 238
Query: 803 LALATHEIHFSILREKVILNEIYQNTPARKMIVQKPGNHNQIGTQDSPITCKKVME---- 636
LALATHEIHFSILRE V TP ++ G + +K E
Sbjct: 239 LALATHEIHFSILREIVF-------TPGQQDKCFLCGQMGHLAADCEGKAKRKAGEFDEK 291
Query: 635 -------KKPYEFLHIWILREYLELDLKITDPPKDFHEDLERLIDDFIFICFFAGNDFLP 477
KKPY+FL+IW LREYLEL+++I +PP F D E ++DDFIF+CFF GNDFLP
Sbjct: 292 GDEGAVAKKPYQFLNIWTLREYLELEMRIPNPP--FKIDFECIVDDFIFMCFFVGNDFLP 349
Query: 476 HMPSLEIHEGAIDLMMHVYRKEFKNLGGYLVDMSRVNDKKDGFWKQSRVEKFILAVGSFE 297
HMP+LEI EGAI+L++ VY+KEF +GGYL D + N S+VE FI AVGS+E
Sbjct: 350 HMPTLEIREGAINLLLAVYKKEFTAMGGYLTDGCKPN--------LSKVEHFIQAVGSYE 401
Query: 296 EQIFRKRAGIRERKIRRILLDDAKAI----DEAQEQLN-ESL------------------ 186
++IF+KRA + +R+ RI + A++ D+AQ Q+ ESL
Sbjct: 402 DKIFQKRARLHQRQSERIKREKAQSRSRRGDDAQPQVQPESLVPVARFHGSRLASAPSPS 461
Query: 185 -------------SSFNASNSDNISNGVQ---------ESSLGPRLCNANNT----ALEN 84
S + S D + VQ +S+G + A N+ EN
Sbjct: 462 PFQHSLEAADLDVRSAHFSALDGKGSSVQAHKVARLSSSASVGAAIVEAENSLEIEVHEN 521
Query: 83 TRELQLKLREHLRNSADTFKQR 18
EL+ KL+E LR +D F +
Sbjct: 522 KDELKAKLKEILREKSDAFNSK 543
>gb|AAF87130.1|AC006434_26 F10A5.15 [Arabidopsis thaliana]
Length = 1037
Score = 460 bits (1184), Expect = e-127
Identities = 265/540 (49%), Positives = 338/540 (62%), Gaps = 48/540 (8%)
Frame = -3
Query: 1502 MGVPSFYKWLVNKYPKIRVDALEEKGGS-------ADASLKNPNDLEFDNLYLDMNGIIH 1344
MGVPSFY+WL KYP + D +EE+ D S NPN+LE+DNLYLDMNGIIH
Sbjct: 1 MGVPSFYRWLAEKYPLLVADVIEEEPVEIEGIKIPVDTSKPNPNNLEYDNLYLDMNGIIH 60
Query: 1343 PCFHPEDSECGPTSFEEVFENIYEYIDRIFNIVRPRKLLYLAIDGVAPRAKMNQQRTRRF 1164
PCFHPED PT+FEEVF+ +++YIDR+F +VRPRKLLY+AIDGVAPRAKMNQQR+RRF
Sbjct: 61 PCFHPEDRP-SPTTFEEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 1163 RNAKDNEIADXXXXXXXXXXXLQGKIVLPKEEETEVSDSNVITPGTEFMQXXXXXXXXXX 984
R+AKD A +G+ LP + +++V DSNVITPGTEFM
Sbjct: 120 RSAKDASDAAAEEERLREEFEREGRR-LPPKVDSQVFDSNVITPGTEFMGVLSIALQYYV 178
Query: 983 XSRMCVNSSWKKVQVILSNANVPGEGEHKVMSFIRAQRGSPGYDPNTRHCLYGLDADLIM 804
R+ + WK ++VILS+ANVPGEGEHK+MS+IR QR PG+DPNTRHCLYGLDADLIM
Sbjct: 179 HLRLNHDVGWKNIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 238
Query: 803 LALATHEIHFSILREKVILNEIYQNTPARKMIVQKPGNHNQIGTQDSPITCKKVME---- 636
L LATHE+HFSILRE V TP ++ G + K+ E
Sbjct: 239 LGLATHEVHFSILREVVY-------TPGQQERCFLCGQMGHFASNCEGKPKKRAGESDEK 291
Query: 635 -------KKPYEFLHIWILREYLELDLKITDPPKDFHEDLERLIDDFIFICFFAGNDFLP 477
KKPY+FLHIW+LREYLEL+++I +PP F DLER++DDFIFICFF GNDFLP
Sbjct: 292 GDGNDFVKKPYQFLHIWVLREYLELEMRIPNPP--FEIDLERIVDDFIFICFFVGNDFLP 349
Query: 476 HMPSLEIHEGAIDLMMHVYRKEFKNLGGYLVDMSRVNDKKDGFWKQSRVEKFILAVGSFE 297
HMP+LEI EGAI+L+M VY+KEF++ GYL D + N K RVE+FI AVGSFE
Sbjct: 350 HMPTLEIREGAINLLMAVYKKEFRSFDGYLTDGCKPNLK--------RVEQFIQAVGSFE 401
Query: 296 EQIFRKRAGIRERKIRRILLDDA----KAIDEAQEQLNESL---SSFNAS---------- 168
++IF+KRA +R+ R+ D A K +D+ + L + F+ S
Sbjct: 402 DKIFQKRAMQHQRQAERVKRDKAGKATKRMDDEAPTVQPDLVPVARFSGSRLASAPTPSP 461
Query: 167 --NSDNISNGVQE-------SSLGPRLCNANNT----ALENTRELQLKLREHLRNSADTF 27
++D S Q+ SS+G + + N+ EN EL+ KL+E +R +D F
Sbjct: 462 FQSNDGRSAPHQKVRRLSPGSSVGAAIVDVENSLESDERENKEELKTKLKELIREKSDAF 521