BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00002324
         (631 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P30956.1|RK28_TOBAC RecName: Full=50S ribosomal protein L28, ...   184   9e-45
ref|XP_002528814.1| 50S ribosomal protein L28, chloroplast precu...   178   8e-43
gb|AFK44373.1| unknown [Medicago truncatula]                          176   2e-42
gb|ABK96762.1| unknown [Populus trichocarpa x Populus deltoides]      175   7e-42
ref|XP_002315574.1| predicted protein [Populus trichocarpa] gi|2...   174   9e-42

>sp|P30956.1|RK28_TOBAC RecName: Full=50S ribosomal protein L28, chloroplastic; AltName:
           Full=CL28; Flags: Precursor gi|279656|pir||R5NT28
           ribosomal protein L28 precursor, chloroplast - tobacco
           gi|189096147|pdb|3BBO|Y Chain Y, Homology Model For The
           Spinach Chloroplast 50s Subunit Fitted To 9.4a Cryo-Em
           Map Of The 70s Chlororibosome gi|20016|emb|CAA48211.1|
           ribosomal protein CL28 [Nicotiana tabacum]
          Length = 151

 Score =  184 bits (468), Expect = 9e-45
 Identities = 106/152 (69%), Positives = 119/152 (78%), Gaps = 11/152 (7%)
 Frame = -3

Query: 575 MATVTATVGL---VRNHHH--QVLRSGATP---LSADLKFATSQLSGIKIS-TNTCHSLI 423
           MAT+ A + L   V + H    V +  + P   LS++L F TSQLSG+KIS T+   S  
Sbjct: 1   MATMVAGISLRGPVMSSHRTFSVTKRASLPQSKLSSELSFVTSQLSGLKISSTHFISSSA 60

Query: 422 PIS--HHPFLQPIVARRVCPFTGKRSNRANKVSHSNHKTKRLQFVNLQYKRIWWEAGKRY 249
           P+S    P LQP VARR+CPFTGK+SNRANKVSHSNHKTK+LQFVNLQYKRIWWEAGKRY
Sbjct: 61  PLSVPFKPSLQP-VARRICPFTGKKSNRANKVSHSNHKTKKLQFVNLQYKRIWWEAGKRY 119

Query: 248 VKLRLSTKAIKTIEKNGLDAVAKKAGIDLSKK 153
           VKLRLSTKAIKTIEKNGLDAVAKKAGIDLSKK
Sbjct: 120 VKLRLSTKAIKTIEKNGLDAVAKKAGIDLSKK 151


>ref|XP_002528814.1| 50S ribosomal protein L28, chloroplast precursor, putative [Ricinus
           communis] gi|223531726|gb|EEF33548.1| 50S ribosomal
           protein L28, chloroplast precursor, putative [Ricinus
           communis]
          Length = 143

 Score =  178 bits (451), Expect = 8e-43
 Identities = 98/145 (67%), Positives = 112/145 (77%), Gaps = 4/145 (2%)
 Frame = -3

Query: 575 MATVTATVGLVRNHHH----QVLRSGATPLSADLKFATSQLSGIKISTNTCHSLIPISHH 408
           MA  TA+ GL+         ++  S  T   +++ F TSQLSGIKIS N  +   P +  
Sbjct: 1   MAMATASSGLLCFRRPYLPTKLASSSKTSAVSEIGFVTSQLSGIKISYNLPYLSNPTT-- 58

Query: 407 PFLQPIVARRVCPFTGKRSNRANKVSHSNHKTKRLQFVNLQYKRIWWEAGKRYVKLRLST 228
           P LQ IVARRVCPFTGK++NRANKVS SNHKTK+LQFVNLQYK+IWWEAGKRYVKLRLST
Sbjct: 59  PPLQSIVARRVCPFTGKKANRANKVSFSNHKTKKLQFVNLQYKKIWWEAGKRYVKLRLST 118

Query: 227 KAIKTIEKNGLDAVAKKAGIDLSKK 153
           KA+KTIEKNGLDAVAKKAGIDLSKK
Sbjct: 119 KALKTIEKNGLDAVAKKAGIDLSKK 143


>gb|AFK44373.1| unknown [Medicago truncatula]
          Length = 146

 Score =  176 bits (447), Expect = 2e-42
 Identities = 92/116 (79%), Positives = 100/116 (86%), Gaps = 1/116 (0%)
 Frame = -3

Query: 497 SADLKFATSQLSGIKISTNTCHSL-IPISHHPFLQPIVARRVCPFTGKRSNRANKVSHSN 321
           S  L F  SQLSG+KIS+ T   L  PI   PF QPIVA+RVCPFTGK+SNRANKVS SN
Sbjct: 32  SPQLGFLNSQLSGLKISSQTSLKLPTPIVASPF-QPIVAKRVCPFTGKKSNRANKVSFSN 90

Query: 320 HKTKRLQFVNLQYKRIWWEAGKRYVKLRLSTKAIKTIEKNGLDAVAKKAGIDLSKK 153
           HKTK+LQFVNLQYKR+WWEAGKR+VKLRLSTKA+KTIEKNGLDAVAKKAGIDLSKK
Sbjct: 91  HKTKKLQFVNLQYKRVWWEAGKRFVKLRLSTKALKTIEKNGLDAVAKKAGIDLSKK 146


>gb|ABK96762.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 153

 Score =  175 bits (443), Expect = 7e-42
 Identities = 88/115 (76%), Positives = 100/115 (86%), Gaps = 1/115 (0%)
 Frame = -3

Query: 494 ADLKFATSQLSGIKISTNTCHSL-IPISHHPFLQPIVARRVCPFTGKRSNRANKVSHSNH 318
           +++ F TSQLSGI+IS N    L  P S  P LQP++ARR+CPFTGK++NRANKVS SNH
Sbjct: 41  SEIGFVTSQLSGIRISYNPPEPLSAPFS--PALQPVIARRICPFTGKKANRANKVSFSNH 98

Query: 317 KTKRLQFVNLQYKRIWWEAGKRYVKLRLSTKAIKTIEKNGLDAVAKKAGIDLSKK 153
           KTK+LQFVNLQYKR+WWEAGKRYVKLRLSTKA+KTIEKNGLDAVAKKAGIDL KK
Sbjct: 99  KTKKLQFVNLQYKRVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKK 153


>ref|XP_002315574.1| predicted protein [Populus trichocarpa] gi|222864614|gb|EEF01745.1|
           predicted protein [Populus trichocarpa]
          Length = 118

 Score =  174 bits (442), Expect = 9e-42
 Identities = 88/115 (76%), Positives = 100/115 (86%), Gaps = 1/115 (0%)
 Frame = -3

Query: 494 ADLKFATSQLSGIKISTNTCHSL-IPISHHPFLQPIVARRVCPFTGKRSNRANKVSHSNH 318
           +++ F TSQLSGI+IS N    L  P S  P LQP++ARR+CPFTGK++NRANKVS SNH
Sbjct: 6   SEIGFVTSQLSGIRISYNPPKPLSAPFS--PALQPVIARRICPFTGKKANRANKVSFSNH 63

Query: 317 KTKRLQFVNLQYKRIWWEAGKRYVKLRLSTKAIKTIEKNGLDAVAKKAGIDLSKK 153
           KTK+LQFVNLQYKR+WWEAGKRYVKLRLSTKA+KTIEKNGLDAVAKKAGIDL KK
Sbjct: 64  KTKKLQFVNLQYKRVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKK 118