BLASTX nr result

ID: Lithospermum22_contig00002264 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00002264
         (706 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002454946.1| hypothetical protein SORBIDRAFT_03g001950 [S...   170   3e-40
ref|XP_003573502.1| PREDICTED: small nuclear ribonucleoprotein E...   168   9e-40
ref|XP_002278114.1| PREDICTED: small nuclear ribonucleoprotein E...   167   1e-39
ref|XP_003573886.1| PREDICTED: small nuclear ribonucleoprotein E...   167   2e-39
gb|ADR71258.1| small nuclear ribonucleoprotein E [Hevea brasilie...   167   3e-39

>ref|XP_002454946.1| hypothetical protein SORBIDRAFT_03g001950 [Sorghum bicolor]
           gi|241926921|gb|EES00066.1| hypothetical protein
           SORBIDRAFT_03g001950 [Sorghum bicolor]
          Length = 88

 Score =  170 bits (430), Expect = 3e-40
 Identities = 85/88 (96%), Positives = 87/88 (98%)
 Frame = +1

Query: 166 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 345
           MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEE+
Sbjct: 1   MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEI 60

Query: 346 HVKKNTRKQLGRILLKGDNITLMMNTGK 429
           +VKKNTRK LGRILLKGDNITLMMNTGK
Sbjct: 61  NVKKNTRKSLGRILLKGDNITLMMNTGK 88


>ref|XP_003573502.1| PREDICTED: small nuclear ribonucleoprotein E-like [Brachypodium
           distachyon]
          Length = 88

 Score =  168 bits (426), Expect = 9e-40
 Identities = 84/88 (95%), Positives = 87/88 (98%)
 Frame = +1

Query: 166 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 345
           MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVL+DAEE+
Sbjct: 1   MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLEDAEEI 60

Query: 346 HVKKNTRKQLGRILLKGDNITLMMNTGK 429
           +VKKNTRK LGRILLKGDNITLMMNTGK
Sbjct: 61  NVKKNTRKSLGRILLKGDNITLMMNTGK 88


>ref|XP_002278114.1| PREDICTED: small nuclear ribonucleoprotein E [Vitis vinifera]
           gi|297734216|emb|CBI15463.3| unnamed protein product
           [Vitis vinifera]
          Length = 88

 Score =  167 bits (424), Expect = 1e-39
 Identities = 84/88 (95%), Positives = 87/88 (98%)
 Frame = +1

Query: 166 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 345
           MA+TKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV
Sbjct: 1   MATTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60

Query: 346 HVKKNTRKQLGRILLKGDNITLMMNTGK 429
           +VKKNT+K LGRILLKGDNITLMMNTGK
Sbjct: 61  NVKKNTKKTLGRILLKGDNITLMMNTGK 88


>ref|XP_003573886.1| PREDICTED: small nuclear ribonucleoprotein E-like [Brachypodium
           distachyon]
          Length = 88

 Score =  167 bits (423), Expect = 2e-39
 Identities = 82/88 (93%), Positives = 87/88 (98%)
 Frame = +1

Query: 166 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 345
           MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKD+RIEGRIIGFDEYMNLVL+DAEE+
Sbjct: 1   MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDMRIEGRIIGFDEYMNLVLEDAEEI 60

Query: 346 HVKKNTRKQLGRILLKGDNITLMMNTGK 429
           ++KKNTRK LGRILLKGDNITLMMNTGK
Sbjct: 61  NIKKNTRKSLGRILLKGDNITLMMNTGK 88


>gb|ADR71258.1| small nuclear ribonucleoprotein E [Hevea brasiliensis]
          Length = 88

 Score =  167 bits (422), Expect = 3e-39
 Identities = 83/88 (94%), Positives = 86/88 (97%)
 Frame = +1

Query: 166 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 345
           MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKD+RIEGRIIGFDEYMNLVLDDAEEV
Sbjct: 1   MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDMRIEGRIIGFDEYMNLVLDDAEEV 60

Query: 346 HVKKNTRKQLGRILLKGDNITLMMNTGK 429
           ++KK TRK LGRILLKGDNITLMMNTGK
Sbjct: 61  NIKKKTRKSLGRILLKGDNITLMMNTGK 88


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