BLASTX nr result

ID: Lithospermum22_contig00002221 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00002221
         (1135 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281066.1| PREDICTED: pre-mRNA-splicing factor SPF27 ho...   292   1e-76
ref|XP_002322083.1| predicted protein [Populus trichocarpa] gi|2...   280   6e-73
ref|XP_004137495.1| PREDICTED: pre-mRNA-splicing factor SPF27 ho...   277   4e-72
ref|XP_003631066.1| Pre-mRNA-splicing factor SPF27-like protein ...   276   7e-72
gb|AFK38781.1| unknown [Lotus japonicus]                              266   7e-69

>ref|XP_002281066.1| PREDICTED: pre-mRNA-splicing factor SPF27 homolog [Vitis vinifera]
          Length = 256

 Score =  292 bits (747), Expect = 1e-76
 Identities = 151/248 (60%), Positives = 175/248 (70%)
 Frame = -2

Query: 1056 ATNGDVLMLEAXXXXXPSWATGAEVIDALPYIDDDYGDPKVKAEVDRLVEEEMRRSSXXX 877
            A +GD+LMLEA        +  AE IDALPYIDDDYG PKVK EVDRLVE+EMRRSS   
Sbjct: 2    ANDGDILMLEAPPQA----SRPAEFIDALPYIDDDYGHPKVKEEVDRLVEDEMRRSSKKP 57

Query: 876  XXXXXXXXXXXXXXXKNHPMLAREYERVRAGKPPVQIDTSRYGLEVPGAHKRNDEGXXXX 697
                            NHPMLAREYERVRAGKPPV +D SRYGLE+P  +KRNDE     
Sbjct: 58   SDFLKDLPPLPPFGFHNHPMLAREYERVRAGKPPVALDMSRYGLEMPPMNKRNDETAWKH 117

Query: 696  XXXXXXXXXXXQVIRLENLDLMSKHGPEVWKLYNQQMEGFLSRMQAQVVELNRKIEAVNR 517
                       QVIRLENL+LMSKHG +VWK +NQ++E +LSRMQA  +E N KIE VNR
Sbjct: 118  ALQKAQRLLQHQVIRLENLELMSKHGADVWKQHNQRLEAYLSRMQALAMEQNEKIETVNR 177

Query: 516  ERKYHQQNTAYELNALSTQWRDLCPKNIEIQAACAEIEKQIEELKREATQRGWKLDEDTQ 337
            ERKYHQQNTA+ELNALS QW++LC KNIEI+ ACA+IE  IEEL+REA +RGW LD +  
Sbjct: 178  ERKYHQQNTAFELNALSAQWKELCEKNIEIRTACAKIENNIEELRREAAERGWNLDANID 237

Query: 336  NGHKTHAE 313
            NG  +H+E
Sbjct: 238  NGSLSHSE 245


>ref|XP_002322083.1| predicted protein [Populus trichocarpa] gi|222869079|gb|EEF06210.1|
            predicted protein [Populus trichocarpa]
          Length = 255

 Score =  280 bits (715), Expect = 6e-73
 Identities = 146/250 (58%), Positives = 176/250 (70%), Gaps = 3/250 (1%)
 Frame = -2

Query: 1056 ATNGDVLMLEAXXXXXPSWATG--AEVIDALPYIDDDYGDPKVKAEVDRLVEEEMRRSSX 883
            + NGD+LMLEA       W+T   AE+IDALPYIDDDYG+P VKAEVDRLVEEEMRRSS 
Sbjct: 6    SANGDMLMLEAAPEASRPWSTSSNAEIIDALPYIDDDYGNPSVKAEVDRLVEEEMRRSSK 65

Query: 882  XXXXXXXXXXXXXXXXXKNHPMLAREYERVRAGKPPVQIDTSRYG-LEVPGAHKRNDEGX 706
                             +N+PMLA+EYERVRAG+PPV +D SRY  L++P A+K NDE  
Sbjct: 66   KPSDFLKELPPVPKFTFENYPMLAKEYERVRAGRPPVTLDFSRYSHLDLPAANKMNDETA 125

Query: 705  XXXXXXXXXXXXXXQVIRLENLDLMSKHGPEVWKLYNQQMEGFLSRMQAQVVELNRKIEA 526
                          QVIRLENL+LMSK+GPEVW  +N+Q+E  L+R Q    E N KIEA
Sbjct: 126  WKQALQRAQRLLQHQVIRLENLELMSKYGPEVWIQHNRQLETMLTRTQKLAREQNEKIEA 185

Query: 525  VNRERKYHQQNTAYELNALSTQWRDLCPKNIEIQAACAEIEKQIEELKREATQRGWKLDE 346
            VNRERKYHQQNTAYELNALS QW++LC KNIEIQ AC +IE QIEELKRE+++RGW ++ 
Sbjct: 186  VNRERKYHQQNTAYELNALSAQWKELCQKNIEIQEACIKIENQIEELKRESSERGWNVEA 245

Query: 345  DTQNGHKTHA 316
            + +NG   H+
Sbjct: 246  NIENGSLLHS 255


>ref|XP_004137495.1| PREDICTED: pre-mRNA-splicing factor SPF27 homolog [Cucumis sativus]
            gi|449503115|ref|XP_004161841.1| PREDICTED:
            pre-mRNA-splicing factor SPF27 homolog [Cucumis sativus]
          Length = 256

 Score =  277 bits (708), Expect = 4e-72
 Identities = 142/249 (57%), Positives = 175/249 (70%), Gaps = 3/249 (1%)
 Frame = -2

Query: 1068 MSAAATNGDVLMLEAXXXXXP-SW--ATGAEVIDALPYIDDDYGDPKVKAEVDRLVEEEM 898
            M+A   NGD+LMLEA       +W  +  AEVIDALPYIDDDY DP+VKAEVDRLVEEEM
Sbjct: 1    MAANNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60

Query: 897  RRSSXXXXXXXXXXXXXXXXXXKNHPMLAREYERVRAGKPPVQIDTSRYGLEVPGAHKRN 718
            RRSS                  ++HPMLAREYERVRAG+PPV +D +RY LE P  +K+N
Sbjct: 61   RRSSKRPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120

Query: 717  DEGXXXXXXXXXXXXXXXQVIRLENLDLMSKHGPEVWKLYNQQMEGFLSRMQAQVVELNR 538
            DE                QV+RLENLDLMSK+GP++WK +N+Q+E  LSRMQ    E N 
Sbjct: 121  DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180

Query: 537  KIEAVNRERKYHQQNTAYELNALSTQWRDLCPKNIEIQAACAEIEKQIEELKREATQRGW 358
            KIE VNRERK+HQQN AYEL+ALSTQW++LC KN+EIQ AC ++E QI+EL+REA ++GW
Sbjct: 181  KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGW 240

Query: 357  KLDEDTQNG 331
             L+ + +NG
Sbjct: 241  NLEVNVENG 249


>ref|XP_003631066.1| Pre-mRNA-splicing factor SPF27-like protein [Medicago truncatula]
            gi|355525088|gb|AET05542.1| Pre-mRNA-splicing factor
            SPF27-like protein [Medicago truncatula]
            gi|388502546|gb|AFK39339.1| unknown [Medicago truncatula]
          Length = 261

 Score =  276 bits (706), Expect = 7e-72
 Identities = 141/257 (54%), Positives = 170/257 (66%)
 Frame = -2

Query: 1083 ESYKTMSAAATNGDVLMLEAXXXXXPSWATGAEVIDALPYIDDDYGDPKVKAEVDRLVEE 904
            E   + S + +NGDVLMLEA      S  + AE+IDALPYIDDDY DP+VK EVDRLVEE
Sbjct: 4    EGRSSSSNSNSNGDVLMLEAPPSYGRSSHSDAEIIDALPYIDDDYSDPRVKIEVDRLVEE 63

Query: 903  EMRRSSXXXXXXXXXXXXXXXXXXKNHPMLAREYERVRAGKPPVQIDTSRYGLEVPGAHK 724
            EMRRSS                   ++PM+ REYERVRAG+PPV +D SRY LE P  +K
Sbjct: 64   EMRRSSKKPADFLKDFPPLPSSNFHDYPMIGREYERVRAGRPPVSLDRSRYELEAPPVNK 123

Query: 723  RNDEGXXXXXXXXXXXXXXXQVIRLENLDLMSKHGPEVWKLYNQQMEGFLSRMQAQVVEL 544
            RNDE                Q IR+ENLDL+ KHGP+ WK +NQ++E +LSRMQ    E 
Sbjct: 124  RNDETAWKLAIQRAQRLLQYQTIRMENLDLLFKHGPDAWKQHNQRLEVYLSRMQKLAQEQ 183

Query: 543  NRKIEAVNRERKYHQQNTAYELNALSTQWRDLCPKNIEIQAACAEIEKQIEELKREATQR 364
            N KIE VNRERKYHQQNTAYELNALS QW +LC KNI+I+  CA +E  + EL+REA +R
Sbjct: 184  NDKIEKVNRERKYHQQNTAYELNALSMQWNELCQKNIDIKVVCASVETHLNELRREAAER 243

Query: 363  GWKLDEDTQNGHKTHAE 313
            GW LD  T+NG   ++E
Sbjct: 244  GWNLDAITENGQLANSE 260


>gb|AFK38781.1| unknown [Lotus japonicus]
          Length = 248

 Score =  266 bits (680), Expect = 7e-69
 Identities = 136/246 (55%), Positives = 169/246 (68%), Gaps = 1/246 (0%)
 Frame = -2

Query: 1047 GDVLMLEAXXXXXP-SWATGAEVIDALPYIDDDYGDPKVKAEVDRLVEEEMRRSSXXXXX 871
            G+VLMLEA         ++ AE+IDALPYIDDDYGDP+VK EVDRLVE+EMRRSS     
Sbjct: 2    GEVLMLEAPPSYGGLPRSSDAEIIDALPYIDDDYGDPRVKVEVDRLVEDEMRRSSKKPAD 61

Query: 870  XXXXXXXXXXXXXKNHPMLAREYERVRAGKPPVQIDTSRYGLEVPGAHKRNDEGXXXXXX 691
                         + +PM+AREYERVRAG+PPV ID SRY LE+P  +KRNDE       
Sbjct: 62   FLKDFPPLPTSNLEGYPMIAREYERVRAGRPPVSIDRSRYELEIPPLNKRNDETAWKHAL 121

Query: 690  XXXXXXXXXQVIRLENLDLMSKHGPEVWKLYNQQMEGFLSRMQAQVVELNRKIEAVNRER 511
                     Q++R+EN++L+ K+GP+ WK +N ++E +L RMQ    E N KIE VNRER
Sbjct: 122  QRAQRLLQYQMMRMENIELLLKYGPDAWKQHNHRLEVYLLRMQKLAQEQNEKIEKVNRER 181

Query: 510  KYHQQNTAYELNALSTQWRDLCPKNIEIQAACAEIEKQIEELKREATQRGWKLDEDTQNG 331
            KYHQQNTAYELNALSTQW +LC KNI+I AACA +E +I ELKREA +RGW LD  ++NG
Sbjct: 182  KYHQQNTAYELNALSTQWNELCQKNIDINAACASVETRINELKREAAERGWNLDAISENG 241

Query: 330  HKTHAE 313
               ++E
Sbjct: 242  QLANSE 247


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